RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 DCTN3O75935 186 aa14.15□□□□□ -0.14
SMC6-201ENST00000351948 HAUS5O94927 633 aa14.15□□□□□ -0.14
SMC6-201ENST00000351948 MAP4P27816 1152 aaKnown RBP14.15□□□□□ -0.14
SMC6-201ENST00000351948 SEC24CP53992 1094 aa14.15□□□□□ -0.14
SMC6-201ENST00000351948 GEMP55040 296 aa14.15□□□□□ -0.14
SMC6-201ENST00000351948 MORF4L2Q15014 288 aa14.15□□□□□ -0.14
SMC6-201ENST00000351948 SGO1Q5FBB7 561 aa14.15□□□□□ -0.14
SMC6-201ENST00000351948 MFN1Q8IWA4 741 aa14.15□□□□□ -0.14
SMC6-201ENST00000351948 ARMC2Q8NEN0 867 aa14.15□□□□□ -0.14
SMC6-201ENST00000351948 PDZD7Q9H5P4 517 aa14.15□□□□□ -0.14
SMC6-201ENST00000351948 CASS4Q9NQ75 786 aa14.15□□□□□ -0.14
SMC6-201ENST00000351948 SUPT3HB4E1H0 165 aa14.15□□□□□ -0.14
SMC6-201ENST00000351948 TSPAN1O60635 241 aa14.15□□□□□ -0.14
SMC6-201ENST00000351948 SUPT3HO75486 399 aa14.15□□□□□ -0.14
SMC6-201ENST00000351948 ANP32DO95626 131 aa14.15□□□□□ -0.14
SMC6-201ENST00000351948 TRUB2O95900 331 aaKnown RBP14.15□□□□□ -0.14
SMC6-201ENST00000351948 FDFT1P37268 417 aa14.15□□□□□ -0.14
SMC6-201ENST00000351948 TUFMP49411 452 aaKnown RBP14.15□□□□□ -0.14
SMC6-201ENST00000351948 ALDH18A1P54886 795 aaKnown RBP14.15□□□□□ -0.14
SMC6-201ENST00000351948 CCNG2Q16589 344 aa14.15□□□□□ -0.14
SMC6-201ENST00000351948 KCNT2Q6UVM3 1135 aa14.15□□□□□ -0.14
SMC6-201ENST00000351948 NPLOC4Q8TAT6 608 aa14.15□□□□□ -0.14
SMC6-201ENST00000351948 SDCCAG3Q96C92 435 aa14.15□□□□□ -0.14
SMC6-201ENST00000351948 CORO1BQ9BR76 489 aa14.15□□□□□ -0.14
SMC6-201ENST00000351948 CERS4Q9HA82 394 aa14.15□□□□□ -0.14
SMC6-201ENST00000351948 IARS2Q9NSE4 1012 aaKnown RBP14.15□□□□□ -0.14
SMC6-201ENST00000351948 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.15□□□□□ -0.14
SMC6-201ENST00000351948 EPS15L1Q9UBC2 864 aa14.15□□□□□ -0.14
SMC6-201ENST00000351948 GOLGA8TH3BQL2 631 aa14.15□□□□□ -0.14
SMC6-201ENST00000351948 AP3B1O00203 1094 aa14.15□□□□□ -0.14
SMC6-201ENST00000351948 KRT4P19013 534 aa14.15□□□□□ -0.14
SMC6-201ENST00000351948 ARL2P36404 184 aa14.15□□□□□ -0.14
SMC6-201ENST00000351948 CLNS1AP54105 237 aaKnown RBP14.15□□□□□ -0.14
SMC6-201ENST00000351948 MARC1Q5VT66 337 aa14.15□□□□□ -0.14
SMC6-201ENST00000351948 LRRC6Q86X45 466 aa14.15□□□□□ -0.14
SMC6-201ENST00000351948 VCPIP1Q96JH7 1222 aa14.15□□□□□ -0.14
SMC6-201ENST00000351948 SERPINB11Q96P15 392 aa14.15□□□□□ -0.14
SMC6-201ENST00000351948 EMILIN2Q9BXX0 1053 aa14.15□□□□□ -0.14
SMC6-201ENST00000351948 NIFKQ9BYG3 293 aaKnown RBP14.15□□□□□ -0.14
SMC6-201ENST00000351948 CDC42EP4Q9H3Q1 356 aaKnown RBP14.15□□□□□ -0.14
SMC6-201ENST00000351948 CD274Q9NZQ7 290 aa14.15□□□□□ -0.14
SMC6-201ENST00000351948 PCDHA3Q9Y5H8 950 aa14.15□□□□□ -0.14
SMC6-201ENST00000351948 SYNDIG1LA6NDD5 238 aa14.14□□□□□ -0.15
SMC6-201ENST00000351948 SPECC1L-ADORA2AF8WAN1 911 aa14.14□□□□□ -0.15
SMC6-201ENST00000351948 VCPP55072 806 aaKnown RBP14.14□□□□□ -0.15
SMC6-201ENST00000351948 HNRNPH2P55795 449 aaKnown RBP14.14□□□□□ -0.15
SMC6-201ENST00000351948 BMPR2Q13873 1038 aa14.14□□□□□ -0.15
SMC6-201ENST00000351948 C9orf57Q5W0N0 161 aa14.14□□□□□ -0.15
SMC6-201ENST00000351948 LVRNQ6Q4G3 990 aa14.14□□□□□ -0.15
SMC6-201ENST00000351948 PDZD8Q8NEN9 1154 aa14.14□□□□□ -0.15
SMC6-201ENST00000351948 SCLYQ96I15 445 aa14.14□□□□□ -0.15
SMC6-201ENST00000351948 DDX20Q9UHI6 824 aaKnown RBP14.14□□□□□ -0.15
SMC6-201ENST00000351948 ADGRA2Q96PE1 1338 aa14.14□□□□□ -0.15
SMC6-201ENST00000351948 OR1D2P34982 312 aa14.14□□□□□ -0.15
SMC6-201ENST00000351948 SPDYAQ5MJ70 313 aa14.14□□□□□ -0.15
SMC6-201ENST00000351948 TMEM63BQ5T3F8 832 aa14.14□□□□□ -0.15
SMC6-201ENST00000351948 ZNF697Q5TEC3 545 aa14.14□□□□□ -0.15
SMC6-201ENST00000351948 DCLK3Q9C098 648 aa14.14□□□□□ -0.15
SMC6-201ENST00000351948 CACNG4Q9UBN1 327 aa14.14□□□□□ -0.15
SMC6-201ENST00000351948 LTBP3Q9NS15 1303 aa14.14□□□□□ -0.15
SMC6-201ENST00000351948 NCF1BA6NI72 391 aaPredicted RBP14.14□□□□□ -0.15
SMC6-201ENST00000351948 NCF1CA8MVU1 366 aaPredicted RBP14.14□□□□□ -0.15
SMC6-201ENST00000351948 PRPF4O43172 522 aaKnown RBP eCLIP14.14□□□□□ -0.15
SMC6-201ENST00000351948 PPP1R37O75864 691 aa14.14□□□□□ -0.15
SMC6-201ENST00000351948 FGFR1P11362 822 aa14.14□□□□□ -0.15
SMC6-201ENST00000351948 NCF1P14598 390 aaPredicted RBP14.14□□□□□ -0.15
SMC6-201ENST00000351948 PRKCIP41743 596 aa14.14□□□□□ -0.15
SMC6-201ENST00000351948 MMRN1Q13201 1228 aa14.14□□□□□ -0.15
SMC6-201ENST00000351948 ILDR2Q71H61 639 aa14.14□□□□□ -0.15
SMC6-201ENST00000351948 PTAR1Q7Z6K3 402 aaPredicted RBP14.14□□□□□ -0.15
SMC6-201ENST00000351948 UNC93AQ86WB7 457 aa14.14□□□□□ -0.15
SMC6-201ENST00000351948 ATAD1Q8NBU5 361 aa14.14□□□□□ -0.15
SMC6-201ENST00000351948 LPCAT1Q8NF37 534 aa14.14□□□□□ -0.15
SMC6-201ENST00000351948 CCDC124Q96CT7 223 aaKnown RBP14.14□□□□□ -0.15
SMC6-201ENST00000351948 SEMA4AQ9H3S1 761 aa14.14□□□□□ -0.15
SMC6-201ENST00000351948 HOXC6P09630 235 aa14.14□□□□□ -0.15
SMC6-201ENST00000351948 ETS1P14921 441 aa14.14□□□□□ -0.15
SMC6-201ENST00000351948 PRLRP16471 622 aa14.14□□□□□ -0.15
SMC6-201ENST00000351948 MDH1P40925 334 aaKnown RBP14.14□□□□□ -0.15
SMC6-201ENST00000351948 CAPRIN1Q14444 709 aaKnown RBP14.14□□□□□ -0.15
SMC6-201ENST00000351948 LINC00523Q86TU6 105 aa14.14□□□□□ -0.15
SMC6-201ENST00000351948 FIBCD1Q8N539 461 aa14.14□□□□□ -0.15
SMC6-201ENST00000351948 UBE2Q2Q8WVN8 375 aa14.14□□□□□ -0.15
SMC6-201ENST00000351948 SHISA4Q96DD7 197 aa14.14□□□□□ -0.15
SMC6-201ENST00000351948 PABPC3Q9H361 631 aaKnown RBP14.14□□□□□ -0.15
SMC6-201ENST00000351948 OR12D3Q9UGF7 316 aa14.14□□□□□ -0.15
SMC6-201ENST00000351948 SLC25A13Q9UJS0 675 aa14.14□□□□□ -0.15
SMC6-201ENST00000351948 PLA2G4CQ9UP65 541 aa14.14□□□□□ -0.15
SMC6-201ENST00000351948 ARFGEF2Q9Y6D5 1785 aa14.14□□□□□ -0.15
SMC6-201ENST00000351948 SDR42E2A6NKP2 422 aa14.13□□□□□ -0.15
SMC6-201ENST00000351948 LZTS3O60299 673 aaPredicted RBP14.13□□□□□ -0.15
SMC6-201ENST00000351948 RBL1P28749 1068 aa14.13□□□□□ -0.15
SMC6-201ENST00000351948 RABGGTBP53611 331 aa14.13□□□□□ -0.15
SMC6-201ENST00000351948 GEMIN4P57678 1058 aaKnown RBP14.13□□□□□ -0.15
SMC6-201ENST00000351948 KDSRQ06136 332 aa14.13□□□□□ -0.15
SMC6-201ENST00000351948 STX3Q13277 289 aa14.13□□□□□ -0.15
SMC6-201ENST00000351948 RAP1GAP2Q684P5 730 aa14.13□□□□□ -0.15
SMC6-201ENST00000351948 IRF2BP2Q7Z5L9 587 aa14.13□□□□□ -0.15
SMC6-201ENST00000351948 UNC45BQ8IWX7 931 aa14.13□□□□□ -0.15
SMC6-201ENST00000351948 FTHL17Q9BXU8 183 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms