RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 ZNF606Q8WXB4 792 aa16.52■□□□□ 0.24
TSPAN4-201ENST00000346501 SHC3Q92529 594 aa16.52■□□□□ 0.24
TSPAN4-201ENST00000346501 MDM4O15151 490 aa16.51■□□□□ 0.23
TSPAN4-201ENST00000346501 GFRA3O60609 400 aa16.51■□□□□ 0.23
TSPAN4-201ENST00000346501 RNF40O75150 1001 aa16.51■□□□□ 0.23
TSPAN4-201ENST00000346501 EGFP01133 1207 aa16.51■□□□□ 0.23
TSPAN4-201ENST00000346501 CYBBP04839 570 aa16.51■□□□□ 0.23
TSPAN4-201ENST00000346501 HMBSP08397 361 aa16.51■□□□□ 0.23
TSPAN4-201ENST00000346501 HOXD11P31277 338 aaPredicted RBP16.51■□□□□ 0.23
TSPAN4-201ENST00000346501 DAOAP59103 153 aa16.51■□□□□ 0.23
TSPAN4-201ENST00000346501 MIIPQ5JXC2 388 aa16.51■□□□□ 0.23
TSPAN4-201ENST00000346501 PMF1Q6P1K2 205 aa16.51■□□□□ 0.23
TSPAN4-201ENST00000346501 Q6ZS52 159 aa16.51■□□□□ 0.23
TSPAN4-201ENST00000346501 FAM149B1Q96BN6 582 aa16.51■□□□□ 0.23
TSPAN4-201ENST00000346501 PLD4Q96BZ4 506 aa16.51■□□□□ 0.23
TSPAN4-201ENST00000346501 PCMTD1Q96MG8 357 aaPredicted RBP16.51■□□□□ 0.23
TSPAN4-201ENST00000346501 BBS2Q9BXC9 721 aa16.51■□□□□ 0.23
TSPAN4-201ENST00000346501 MIS12Q9H081 205 aa16.51■□□□□ 0.23
TSPAN4-201ENST00000346501 VPS16Q9H269 839 aa16.51■□□□□ 0.23
TSPAN4-201ENST00000346501 ARHGEF4Q9NR80 690 aa16.51■□□□□ 0.23
TSPAN4-201ENST00000346501 TAB2Q9NYJ8 693 aa16.51■□□□□ 0.23
TSPAN4-201ENST00000346501 DEC1Q9P2X7 70 aa16.51■□□□□ 0.23
TSPAN4-201ENST00000346501 RAB23Q9ULC3 237 aa16.51■□□□□ 0.23
TSPAN4-201ENST00000346501 HBS1LQ9Y450 684 aaKnown RBP16.51■□□□□ 0.23
TSPAN4-201ENST00000346501 R4GN57 208 aa16.51■□□□□ 0.23
TSPAN4-201ENST00000346501 CACNA1IQ9P0X4 2223 aa16.51■□□□□ 0.23
TSPAN4-201ENST00000346501 SMTNL1A8MU46 457 aa16.5■□□□□ 0.23
TSPAN4-201ENST00000346501 CAPN9O14815 690 aa16.5■□□□□ 0.23
TSPAN4-201ENST00000346501 HOXC11O43248 304 aaPredicted RBP16.5■□□□□ 0.23
TSPAN4-201ENST00000346501 STC2O76061 302 aa16.5■□□□□ 0.23
TSPAN4-201ENST00000346501 PAPSS2O95340 614 aaPredicted RBP16.5■□□□□ 0.23
TSPAN4-201ENST00000346501 LMNAP02545 664 aaKnown RBP16.5■□□□□ 0.23
TSPAN4-201ENST00000346501 LTFP02788 710 aa16.5■□□□□ 0.23
TSPAN4-201ENST00000346501 GRIA2P42262 883 aa16.5■□□□□ 0.23
TSPAN4-201ENST00000346501 TYRO3Q06418 890 aa16.5■□□□□ 0.23
TSPAN4-201ENST00000346501 CAVIN1Q6NZI2 390 aaKnown RBP16.5■□□□□ 0.23
TSPAN4-201ENST00000346501 MAML2Q8IZL2 1156 aaPredicted RBP16.5■□□□□ 0.23
TSPAN4-201ENST00000346501 PHOX2BQ99453 314 aa16.5■□□□□ 0.23
TSPAN4-201ENST00000346501 LSM14BQ9BX40 385 aaKnown RBP16.5■□□□□ 0.23
TSPAN4-201ENST00000346501 FANCLQ9NW38 375 aa16.5■□□□□ 0.23
TSPAN4-201ENST00000346501 DAAM1Q9Y4D1 1078 aa16.5■□□□□ 0.23
TSPAN4-201ENST00000346501 TBC1D3BA6NDS4 549 aa16.49■□□□□ 0.23
TSPAN4-201ENST00000346501 YJEFN3A6XGL0 299 aa16.49■□□□□ 0.23
TSPAN4-201ENST00000346501 CHURC1-FNTBB4DL54 471 aa16.49■□□□□ 0.23
TSPAN4-201ENST00000346501 E7ENQ6 273 aa16.49■□□□□ 0.23
TSPAN4-201ENST00000346501 NEDD8-MDP1E9PL57 170 aa16.49■□□□□ 0.23
TSPAN4-201ENST00000346501 PIK3R2O00459 728 aa16.49■□□□□ 0.23
TSPAN4-201ENST00000346501 KAT7O95251 611 aa16.49■□□□□ 0.23
TSPAN4-201ENST00000346501 CORO1AP31146 461 aaKnown RBP16.49■□□□□ 0.23
TSPAN4-201ENST00000346501 OPRD1P41143 372 aa16.49■□□□□ 0.23
TSPAN4-201ENST00000346501 GPD2P43304 727 aa16.49■□□□□ 0.23
TSPAN4-201ENST00000346501 ZNF445P59923 1031 aa16.49■□□□□ 0.23
TSPAN4-201ENST00000346501 SATB1Q01826 763 aa16.49■□□□□ 0.23
TSPAN4-201ENST00000346501 KRT31Q15323 416 aa16.49■□□□□ 0.23
TSPAN4-201ENST00000346501 CDKAL1Q5VV42 579 aa16.49■□□□□ 0.23
TSPAN4-201ENST00000346501 TSSK4Q6SA08 328 aa16.49■□□□□ 0.23
TSPAN4-201ENST00000346501 TPGS1Q6ZTW0 290 aa16.49■□□□□ 0.23
TSPAN4-201ENST00000346501 C11orf57Q6ZUT1 292 aaPredicted RBP16.49■□□□□ 0.23
TSPAN4-201ENST00000346501 RPLP0P6Q8NHW5 317 aa16.49■□□□□ 0.23
TSPAN4-201ENST00000346501 EDEM1Q92611 657 aa16.49■□□□□ 0.23
TSPAN4-201ENST00000346501 ZSWIM1Q9BR11 485 aa16.49■□□□□ 0.23
TSPAN4-201ENST00000346501 SYNCQ9H7C4 482 aa16.49■□□□□ 0.23
TSPAN4-201ENST00000346501 CALCAP01258 141 aa16.48■□□□□ 0.23
TSPAN4-201ENST00000346501 NCAM1P13591 858 aa16.48■□□□□ 0.23
TSPAN4-201ENST00000346501 CNR2P34972 360 aa16.48■□□□□ 0.23
TSPAN4-201ENST00000346501 MRPS21P82921 87 aaKnown RBP16.48■□□□□ 0.23
TSPAN4-201ENST00000346501 GAS6Q14393 721 aa16.48■□□□□ 0.23
TSPAN4-201ENST00000346501 DRAP1Q14919 205 aaPredicted RBP16.48■□□□□ 0.23
TSPAN4-201ENST00000346501 E2F5Q15329 346 aa16.48■□□□□ 0.23
TSPAN4-201ENST00000346501 HSF5Q4G112 596 aaPredicted RBP16.48■□□□□ 0.23
TSPAN4-201ENST00000346501 KLHDC7AQ5VTJ3 777 aa16.48■□□□□ 0.23
TSPAN4-201ENST00000346501 GRAMD4Q6IC98 578 aa16.48■□□□□ 0.23
TSPAN4-201ENST00000346501 DENND1BQ6P3S1 775 aa16.48■□□□□ 0.23
TSPAN4-201ENST00000346501 TRMT11Q7Z4G4 463 aaKnown RBP16.48■□□□□ 0.23
TSPAN4-201ENST00000346501 TMEM25Q86YD3 366 aa16.48■□□□□ 0.23
TSPAN4-201ENST00000346501 FMNL3Q8IVF7 1028 aa16.48■□□□□ 0.23
TSPAN4-201ENST00000346501 UNC45BQ8IWX7 931 aa16.48■□□□□ 0.23
TSPAN4-201ENST00000346501 CAMKK1Q8N5S9 505 aa16.48■□□□□ 0.23
TSPAN4-201ENST00000346501 NAT16Q8N8M0 369 aa16.48■□□□□ 0.23
TSPAN4-201ENST00000346501 ZBTB44Q8NCP5 570 aa16.48■□□□□ 0.23
TSPAN4-201ENST00000346501 MSANTD4Q8NCY6 345 aa16.48■□□□□ 0.23
TSPAN4-201ENST00000346501 IPO4Q8TEX9 1081 aaKnown RBP16.48■□□□□ 0.23
TSPAN4-201ENST00000346501 NDRG1Q92597 394 aaKnown RBP16.48■□□□□ 0.23
TSPAN4-201ENST00000346501 HINFPQ9BQA5 517 aa16.48■□□□□ 0.23
TSPAN4-201ENST00000346501 FBRSL1Q9HCM7 1045 aaKnown RBP16.48■□□□□ 0.23
TSPAN4-201ENST00000346501 SIX2Q9NPC8 291 aa16.48■□□□□ 0.23
TSPAN4-201ENST00000346501 PLCB1Q9NQ66 1216 aa16.48■□□□□ 0.23
TSPAN4-201ENST00000346501 DNAJC17Q9NVM6 304 aaKnown RBP16.48■□□□□ 0.23
TSPAN4-201ENST00000346501 TMEM63CQ9P1W3 806 aa16.48■□□□□ 0.23
TSPAN4-201ENST00000346501 PIEZO1Q92508 2521 aa16.47■□□□□ 0.23
TSPAN4-201ENST00000346501 BECN2A8MW95 431 aa16.47■□□□□ 0.23
TSPAN4-201ENST00000346501 FOXN3O00409 490 aaPredicted RBP16.47■□□□□ 0.23
TSPAN4-201ENST00000346501 ZBTB24O43167 697 aaPredicted RBP16.47■□□□□ 0.23
TSPAN4-201ENST00000346501 TYRP14679 529 aa16.47■□□□□ 0.23
TSPAN4-201ENST00000346501 UCHL3P15374 230 aa16.47■□□□□ 0.23
TSPAN4-201ENST00000346501 HOXA6P31267 233 aa16.47■□□□□ 0.23
TSPAN4-201ENST00000346501 TNFRSF4P43489 277 aa16.47■□□□□ 0.23
TSPAN4-201ENST00000346501 SLC11A2P49281 568 aa16.47■□□□□ 0.23
TSPAN4-201ENST00000346501 SEC13P55735 322 aa16.47■□□□□ 0.23
TSPAN4-201ENST00000346501 TPM4P67936 248 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms