RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 AP5Z1O43299 807 aa13.07□□□□□ -0.32
SGCA-202ENST00000344627 PROS1P07225 676 aa13.07□□□□□ -0.32
SGCA-202ENST00000344627 RARGP13631 454 aa13.07□□□□□ -0.32
SGCA-202ENST00000344627 PSEN1P49768 467 aa13.07□□□□□ -0.32
SGCA-202ENST00000344627 NOVA1P51513 510 aaKnown RBP13.07□□□□□ -0.32
SGCA-202ENST00000344627 SLC8A3P57103 927 aa13.07□□□□□ -0.32
SGCA-202ENST00000344627 LRMPQ12912 555 aa13.07□□□□□ -0.32
SGCA-202ENST00000344627 CCDC6Q16204 474 aa13.07□□□□□ -0.32
SGCA-202ENST00000344627 PEAR1Q5VY43 1037 aaPredicted RBP13.07□□□□□ -0.32
SGCA-202ENST00000344627 KLHL10Q6JEL2 608 aa13.07□□□□□ -0.32
SGCA-202ENST00000344627 PSAPL1Q6NUJ1 521 aa13.07□□□□□ -0.32
SGCA-202ENST00000344627 KLHDC10Q6PID8 442 aa13.07□□□□□ -0.32
SGCA-202ENST00000344627 SLC23A3Q6PIS1 610 aa13.07□□□□□ -0.32
SGCA-202ENST00000344627 SFTPA1Q8IWL2 248 aa13.07□□□□□ -0.32
SGCA-202ENST00000344627 ZNF276Q8N554 614 aa13.07□□□□□ -0.32
SGCA-202ENST00000344627 TTC39CQ8N584 583 aa13.07□□□□□ -0.32
SGCA-202ENST00000344627 TXNDC5Q8NBS9 432 aaKnown RBP13.07□□□□□ -0.32
SGCA-202ENST00000344627 ENGASEQ8NFI3 743 aa13.07□□□□□ -0.32
SGCA-202ENST00000344627 TMEM176AQ96HP8 235 aa13.07□□□□□ -0.32
SGCA-202ENST00000344627 ZFRQ96KR1 1074 aaKnown RBP13.07□□□□□ -0.32
SGCA-202ENST00000344627 CDK5RAP1Q96SZ6 601 aaKnown RBP13.07□□□□□ -0.32
SGCA-202ENST00000344627 DUSP16Q9BY84 665 aa13.07□□□□□ -0.32
SGCA-202ENST00000344627 FAM124BQ9H5Z6 455 aaPredicted RBP13.07□□□□□ -0.32
SGCA-202ENST00000344627 SPHK2Q9NRA0 654 aa13.07□□□□□ -0.32
SGCA-202ENST00000344627 RXFP3Q9NSD7 469 aa13.07□□□□□ -0.32
SGCA-202ENST00000344627 BCCIPQ9P287 314 aaKnown RBP eCLIP13.07□□□□□ -0.32
SGCA-202ENST00000344627 ARMCX3Q9UH62 379 aaPredicted RBP13.07□□□□□ -0.32
SGCA-202ENST00000344627 NAGPAQ9UK23 515 aa13.07□□□□□ -0.32
SGCA-202ENST00000344627 ABCA7Q8IZY2 2146 aa13.07□□□□□ -0.32
SGCA-202ENST00000344627 ACACBO00763 2458 aa13.06□□□□□ -0.32
SGCA-202ENST00000344627 ANTXRLA6NF34 631 aa13.06□□□□□ -0.32
SGCA-202ENST00000344627 HHLA1C9JL84 531 aa13.06□□□□□ -0.32
SGCA-202ENST00000344627 GFRA2O00451 464 aa13.06□□□□□ -0.32
SGCA-202ENST00000344627 DCLK1O15075 740 aa13.06□□□□□ -0.32
SGCA-202ENST00000344627 SLC16A3O15427 465 aaKnown RBP13.06□□□□□ -0.32
SGCA-202ENST00000344627 KLF8O95600 359 aaPredicted RBP13.06□□□□□ -0.32
SGCA-202ENST00000344627 RALAP11233 206 aa13.06□□□□□ -0.32
SGCA-202ENST00000344627 DHPSP49366 369 aaPredicted RBP13.06□□□□□ -0.32
SGCA-202ENST00000344627 PMS1P54277 932 aaKnown RBP13.06□□□□□ -0.32
SGCA-202ENST00000344627 LRRC63Q05C16 580 aa13.06□□□□□ -0.32
SGCA-202ENST00000344627 CCDC40Q4G0X9 1142 aa13.06□□□□□ -0.32
SGCA-202ENST00000344627 CBWD6Q4V339 395 aa13.06□□□□□ -0.32
SGCA-202ENST00000344627 CBWD3Q5JTY5 395 aa13.06□□□□□ -0.32
SGCA-202ENST00000344627 CBWD5Q5RIA9 395 aa13.06□□□□□ -0.32
SGCA-202ENST00000344627 EMC10Q5UCC4 262 aa13.06□□□□□ -0.32
SGCA-202ENST00000344627 TPGS1Q6ZTW0 290 aa13.06□□□□□ -0.32
SGCA-202ENST00000344627 HTR3DQ70Z44 454 aa13.06□□□□□ -0.32
SGCA-202ENST00000344627 C12orf40Q86WS4 652 aa13.06□□□□□ -0.32
SGCA-202ENST00000344627 TMEM25Q86YD3 366 aa13.06□□□□□ -0.32
SGCA-202ENST00000344627 ETFBKMTQ8IXQ9 262 aa13.06□□□□□ -0.32
SGCA-202ENST00000344627 ALLCQ8N6M5 410 aa13.06□□□□□ -0.32
SGCA-202ENST00000344627 TERB1Q8NA31 727 aa13.06□□□□□ -0.32
SGCA-202ENST00000344627 WBP2Q969T9 261 aa13.06□□□□□ -0.32
SGCA-202ENST00000344627 TIGD1Q96MW7 591 aa13.06□□□□□ -0.32
SGCA-202ENST00000344627 ARID3AQ99856 593 aa13.06□□□□□ -0.32
SGCA-202ENST00000344627 KLF16Q9BXK1 252 aaPredicted RBP13.06□□□□□ -0.32
SGCA-202ENST00000344627 TPSD1Q9BZJ3 242 aa13.06□□□□□ -0.32
SGCA-202ENST00000344627 NMUR1Q9HB89 426 aa13.06□□□□□ -0.32
SGCA-202ENST00000344627 ZDHHC4Q9NPG8 344 aa13.06□□□□□ -0.32
SGCA-202ENST00000344627 OSER1Q9NX31 292 aa13.06□□□□□ -0.32
SGCA-202ENST00000344627 DNMT3LQ9UJW3 386 aa13.06□□□□□ -0.32
SGCA-202ENST00000344627 MAN1B1Q9UKM7 699 aa13.06□□□□□ -0.32
SGCA-202ENST00000344627 ZNF510Q9Y2H8 683 aa13.06□□□□□ -0.32
SGCA-202ENST00000344627 THADAQ6YHU6 1953 aa13.06□□□□□ -0.32
SGCA-202ENST00000344627 SPTBN2O15020 2390 aa13.06□□□□□ -0.32
SGCA-202ENST00000344627 NEDD8-MDP1E9PL57 170 aa13.05□□□□□ -0.32
SGCA-202ENST00000344627 H0Y626 953 aa13.05□□□□□ -0.32
SGCA-202ENST00000344627 KRT37O76014 449 aa13.05□□□□□ -0.32
SGCA-202ENST00000344627 TRIM16O95361 564 aa13.05□□□□□ -0.32
SGCA-202ENST00000344627 HMBSP08397 361 aa13.05□□□□□ -0.32
SGCA-202ENST00000344627 CD19P15391 556 aa13.05□□□□□ -0.32
SGCA-202ENST00000344627 NTSR1P30989 418 aa13.05□□□□□ -0.32
SGCA-202ENST00000344627 PLA2G4AP47712 749 aa13.05□□□□□ -0.32
SGCA-202ENST00000344627 KIF11P52732 1056 aa13.05□□□□□ -0.32
SGCA-202ENST00000344627 RAD23BP54727 409 aa13.05□□□□□ -0.32
SGCA-202ENST00000344627 YWHAEP62258 255 aaKnown RBP13.05□□□□□ -0.32
SGCA-202ENST00000344627 MESP2Q0VG99 397 aa13.05□□□□□ -0.32
SGCA-202ENST00000344627 DUOXA1Q1HG43 343 aa13.05□□□□□ -0.32
SGCA-202ENST00000344627 COBLL1Q53SF7 1204 aa13.05□□□□□ -0.32
SGCA-202ENST00000344627 LYSMD4Q5XG99 296 aa13.05□□□□□ -0.32
SGCA-202ENST00000344627 TMEM92Q6UXU6 159 aa13.05□□□□□ -0.32
SGCA-202ENST00000344627 MIB1Q86YT6 1006 aa13.05□□□□□ -0.32
SGCA-202ENST00000344627 PGBD3Q8N328 593 aa13.05□□□□□ -0.32
SGCA-202ENST00000344627 ZNF513Q8N8E2 541 aaPredicted RBP13.05□□□□□ -0.32
SGCA-202ENST00000344627 SLC4A11Q8NBS3 891 aa13.05□□□□□ -0.32
SGCA-202ENST00000344627 BHMTQ93088 406 aa13.05□□□□□ -0.32
SGCA-202ENST00000344627 BBS2Q9BXC9 721 aa13.05□□□□□ -0.32
SGCA-202ENST00000344627 CYLDQ9NQC7 956 aa13.05□□□□□ -0.32
SGCA-202ENST00000344627 MARK1Q9P0L2 795 aa13.05□□□□□ -0.32
SGCA-202ENST00000344627 RASAL2Q9UJF2 1139 aa13.05□□□□□ -0.32
SGCA-202ENST00000344627 EPG5Q9HCE0 2579 aa13.05□□□□□ -0.32
SGCA-202ENST00000344627 SGK1O00141 431 aa13.04□□□□□ -0.32
SGCA-202ENST00000344627 BIN1O00499 593 aa13.04□□□□□ -0.32
SGCA-202ENST00000344627 CDX4O14627 284 aaPredicted RBP13.04□□□□□ -0.32
SGCA-202ENST00000344627 TULP3O75386 442 aa13.04□□□□□ -0.32
SGCA-202ENST00000344627 ATXN3P54252 364 aaPredicted RBP13.04□□□□□ -0.32
SGCA-202ENST00000344627 ZNF252P-AS1Q0IIN9 211 aa13.04□□□□□ -0.32
SGCA-202ENST00000344627 CUL2Q13617 745 aa13.04□□□□□ -0.32
SGCA-202ENST00000344627 GOLGA7BQ2TAP0 167 aa13.04□□□□□ -0.32
SGCA-202ENST00000344627 MAP7D1Q3KQU3 841 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms