RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 EOGTQ5NDL2 527 aa21.02■□□□□ 0.96
CEACAM3-201ENST00000344550 PRR23BQ6ZRT6 265 aa21.02■□□□□ 0.96
CEACAM3-201ENST00000344550 CEP68Q76N32 757 aa21.02■□□□□ 0.96
CEACAM3-201ENST00000344550 TMEM25Q86YD3 366 aa21.02■□□□□ 0.96
CEACAM3-201ENST00000344550 SLC35F5Q8WV83 523 aa21.02■□□□□ 0.96
CEACAM3-201ENST00000344550 IRGQQ8WZA9 623 aa21.02■□□□□ 0.96
CEACAM3-201ENST00000344550 ZC3H10Q96K80 434 aaKnown RBP21.02■□□□□ 0.96
CEACAM3-201ENST00000344550 HSFY1Q96LI6 401 aa21.02■□□□□ 0.96
CEACAM3-201ENST00000344550 IPO9Q96P70 1041 aaKnown RBP21.02■□□□□ 0.96
CEACAM3-201ENST00000344550 CLSTN2Q9H4D0 955 aa21.02■□□□□ 0.96
CEACAM3-201ENST00000344550 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.02■□□□□ 0.96
CEACAM3-201ENST00000344550 MYO16Q9Y6X6 1858 aa21.02■□□□□ 0.96
CEACAM3-201ENST00000344550 IRF1P10914 325 aa21.01■□□□□ 0.95
CEACAM3-201ENST00000344550 KIR2DL1P43626 348 aaPredicted RBP21.01■□□□□ 0.95
CEACAM3-201ENST00000344550 SLC6A11P48066 632 aa21.01■□□□□ 0.95
CEACAM3-201ENST00000344550 E2F5Q15329 346 aa21.01■□□□□ 0.95
CEACAM3-201ENST00000344550 CRY1Q16526 586 aa21.01■□□□□ 0.95
CEACAM3-201ENST00000344550 ANO4Q32M45 955 aa21.01■□□□□ 0.95
CEACAM3-201ENST00000344550 RSRC2Q7L4I2 434 aaKnown RBP21.01■□□□□ 0.95
CEACAM3-201ENST00000344550 ERMP1Q7Z2K6 904 aa21.01■□□□□ 0.95
CEACAM3-201ENST00000344550 KIAA2013Q8IYS2 634 aa21.01■□□□□ 0.95
CEACAM3-201ENST00000344550 SIX6OS1Q8N1H7 587 aa21.01■□□□□ 0.95
CEACAM3-201ENST00000344550 DCLK2Q8N568 766 aa21.01■□□□□ 0.95
CEACAM3-201ENST00000344550 TSTD1Q8NFU3 115 aa21.01■□□□□ 0.95
CEACAM3-201ENST00000344550 MARCH2Q9P0N8 246 aa21.01■□□□□ 0.95
CEACAM3-201ENST00000344550 DACH1Q9UI36 760 aa21.01■□□□□ 0.95
CEACAM3-201ENST00000344550 TBC1D3BA6NDS4 549 aa21■□□□□ 0.95
CEACAM3-201ENST00000344550 SCAMP3O14828 347 aaKnown RBP21■□□□□ 0.95
CEACAM3-201ENST00000344550 ALDH1A2O94788 518 aa21■□□□□ 0.95
CEACAM3-201ENST00000344550 CHRM1P11229 460 aaPredicted RBP21■□□□□ 0.95
CEACAM3-201ENST00000344550 TGM1P22735 817 aa21■□□□□ 0.95
CEACAM3-201ENST00000344550 ERCC5P28715 1186 aaPredicted RBP21■□□□□ 0.95
CEACAM3-201ENST00000344550 ID4P47928 161 aa21■□□□□ 0.95
CEACAM3-201ENST00000344550 ZNF445P59923 1031 aa21■□□□□ 0.95
CEACAM3-201ENST00000344550 C2orf27AQ580R0 203 aa21■□□□□ 0.95
CEACAM3-201ENST00000344550 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21■□□□□ 0.95
CEACAM3-201ENST00000344550 RASSF3Q86WH2 238 aa21■□□□□ 0.95
CEACAM3-201ENST00000344550 C12orf40Q86WS4 652 aa21■□□□□ 0.95
CEACAM3-201ENST00000344550 FAM114A1Q8IWE2 563 aa21■□□□□ 0.95
CEACAM3-201ENST00000344550 TERB1Q8NA31 727 aa21■□□□□ 0.95
CEACAM3-201ENST00000344550 RBBP8NLQ8NC74 664 aaPredicted RBP21■□□□□ 0.95
CEACAM3-201ENST00000344550 WBP2Q969T9 261 aa21■□□□□ 0.95
CEACAM3-201ENST00000344550 PLD4Q96BZ4 506 aa21■□□□□ 0.95
CEACAM3-201ENST00000344550 CNOT6LQ96LI5 555 aaKnown RBP21■□□□□ 0.95
CEACAM3-201ENST00000344550 BBS2Q9BXC9 721 aa21■□□□□ 0.95
CEACAM3-201ENST00000344550 IRX2Q9BZI1 471 aaPredicted RBP21■□□□□ 0.95
CEACAM3-201ENST00000344550 ULBP1Q9BZM6 244 aa21■□□□□ 0.95
CEACAM3-201ENST00000344550 INTS2Q9H0H0 1204 aaKnown RBP21■□□□□ 0.95
CEACAM3-201ENST00000344550 ABCC13Q9NSE7 274 aa21■□□□□ 0.95
CEACAM3-201ENST00000344550 HBS1LQ9Y450 684 aaKnown RBP21■□□□□ 0.95
CEACAM3-201ENST00000344550 PCDHGA5Q9Y5G8 931 aa21■□□□□ 0.95
CEACAM3-201ENST00000344550 FBXO21O94952 628 aa20.99■□□□□ 0.95
CEACAM3-201ENST00000344550 TYRP14679 529 aa20.99■□□□□ 0.95
CEACAM3-201ENST00000344550 ADIGQ0VDE8 80 aa20.99■□□□□ 0.95
CEACAM3-201ENST00000344550 GRAMD4Q6IC98 578 aa20.99■□□□□ 0.95
CEACAM3-201ENST00000344550 BHLHA9Q7RTU4 235 aa20.99■□□□□ 0.95
CEACAM3-201ENST00000344550 MIB1Q86YT6 1006 aa20.99■□□□□ 0.95
CEACAM3-201ENST00000344550 CPXM2Q8N436 756 aa20.99■□□□□ 0.95
CEACAM3-201ENST00000344550 IL17RCQ8NAC3 791 aa20.99■□□□□ 0.95
CEACAM3-201ENST00000344550 STK32AQ8WU08 396 aa20.99■□□□□ 0.95
CEACAM3-201ENST00000344550 RNF139Q8WU17 664 aa20.99■□□□□ 0.95
CEACAM3-201ENST00000344550 TFAP2BQ92481 460 aa20.99■□□□□ 0.95
CEACAM3-201ENST00000344550 HHIPQ96QV1 700 aa20.99■□□□□ 0.95
CEACAM3-201ENST00000344550 THAP9Q9H5L6 903 aa20.99■□□□□ 0.95
CEACAM3-201ENST00000344550 FBXO10Q9UK96 956 aa20.99■□□□□ 0.95
CEACAM3-201ENST00000344550 ATG2BQ96BY7 2078 aa20.99■□□□□ 0.95
CEACAM3-201ENST00000344550 KIAA1549LQ6ZVL6 1849 aa20.99■□□□□ 0.95
CEACAM3-201ENST00000344550 CEP250Q9BV73 2442 aa20.98■□□□□ 0.95
CEACAM3-201ENST00000344550 RNF225M0QZC1 329 aaPredicted RBP20.98■□□□□ 0.95
CEACAM3-201ENST00000344550 SART1O43290 800 aaKnown RBP20.98■□□□□ 0.95
CEACAM3-201ENST00000344550 MED7O43513 233 aa20.98■□□□□ 0.95
CEACAM3-201ENST00000344550 LATS1O95835 1130 aa20.98■□□□□ 0.95
CEACAM3-201ENST00000344550 RPL34P49207 117 aaKnown RBP20.98■□□□□ 0.95
CEACAM3-201ENST00000344550 MFAP3P55082 362 aa20.98■□□□□ 0.95
CEACAM3-201ENST00000344550 EFEMP1Q12805 493 aa20.98■□□□□ 0.95
CEACAM3-201ENST00000344550 PUM1Q14671 1186 aaKnown RBP eCLIP20.98■□□□□ 0.95
CEACAM3-201ENST00000344550 CSRP2Q16527 193 aa20.98■□□□□ 0.95
CEACAM3-201ENST00000344550 USP39Q53GS9 565 aaKnown RBP20.98■□□□□ 0.95
CEACAM3-201ENST00000344550 BSPRYQ5W0U4 402 aa20.98■□□□□ 0.95
CEACAM3-201ENST00000344550 RRAGAQ7L523 313 aa20.98■□□□□ 0.95
CEACAM3-201ENST00000344550 FAM160A2Q8N612 972 aaPredicted RBP20.98■□□□□ 0.95
CEACAM3-201ENST00000344550 UBA3Q8TBC4 463 aa20.98■□□□□ 0.95
CEACAM3-201ENST00000344550 KREMEN1Q96MU8 473 aa20.98■□□□□ 0.95
CEACAM3-201ENST00000344550 TRIM62Q9BVG3 475 aa20.98■□□□□ 0.95
CEACAM3-201ENST00000344550 POLMQ9NP87 494 aaPredicted RBP20.98■□□□□ 0.95
CEACAM3-201ENST00000344550 RASAL2Q9UJF2 1139 aa20.98■□□□□ 0.95
CEACAM3-201ENST00000344550 NUDT5Q9UKK9 219 aa20.98■□□□□ 0.95
CEACAM3-201ENST00000344550 SLC27A6Q9Y2P4 619 aa20.98■□□□□ 0.95
CEACAM3-201ENST00000344550 MYOFQ9NZM1 2061 aa20.98■□□□□ 0.95
CEACAM3-201ENST00000344550 NEDD8-MDP1E9PL57 170 aa20.97■□□□□ 0.95
CEACAM3-201ENST00000344550 TULP2O00295 520 aa20.97■□□□□ 0.95
CEACAM3-201ENST00000344550 NPC1O15118 1278 aa20.97■□□□□ 0.95
CEACAM3-201ENST00000344550 MDM4O15151 490 aa20.97■□□□□ 0.95
CEACAM3-201ENST00000344550 PENKP01210 267 aaPredicted RBP20.97■□□□□ 0.95
CEACAM3-201ENST00000344550 KLKB1P03952 638 aa20.97■□□□□ 0.95
CEACAM3-201ENST00000344550 HARS2P49590 506 aaKnown RBP20.97■□□□□ 0.95
CEACAM3-201ENST00000344550 SEC13P55735 322 aa20.97■□□□□ 0.95
CEACAM3-201ENST00000344550 DAOAP59103 153 aa20.97■□□□□ 0.95
CEACAM3-201ENST00000344550 BYSLQ13895 437 aaKnown RBP20.97■□□□□ 0.95
CEACAM3-201ENST00000344550 TRIP4Q15650 581 aaPredicted RBP20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms