RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 SMYD2Q9NRG4 433 aa22.23■■□□□ 1.15
CCDC38-201ENST00000344280 ZC3H7BQ9UGR2 993 aaKnown RBP22.23■■□□□ 1.15
CCDC38-201ENST00000344280 IKBKGQ9Y6K9 419 aa22.23■■□□□ 1.15
CCDC38-201ENST00000344280 SETSIPP0DME0 302 aa22.22■■□□□ 1.15
CCDC38-201ENST00000344280 CTAGE3PQ8IX95 158 aa22.22■■□□□ 1.15
CCDC38-201ENST00000344280 CCDC185Q8N715 623 aa22.22■■□□□ 1.15
CCDC38-201ENST00000344280 PPM1NQ8N819 430 aa22.22■■□□□ 1.15
CCDC38-201ENST00000344280 ALKBH8Q96BT7 664 aaKnown RBP22.22■■□□□ 1.15
CCDC38-201ENST00000344280 GOLGA2P5Q9HBQ8 144 aa22.22■■□□□ 1.15
CCDC38-201ENST00000344280 CBX6O95503 412 aa22.22■■□□□ 1.15
CCDC38-201ENST00000344280 ACCSLQ4AC99 568 aa22.22■■□□□ 1.15
CCDC38-201ENST00000344280 ZNF449Q6P9G9 518 aa22.22■■□□□ 1.15
CCDC38-201ENST00000344280 ZNF534Q76KX8 674 aa22.22■■□□□ 1.15
CCDC38-201ENST00000344280 NLRP9Q7RTR0 991 aa22.22■■□□□ 1.15
CCDC38-201ENST00000344280 PYROXD2Q8N2H3 581 aa22.22■■□□□ 1.15
CCDC38-201ENST00000344280 MPP5Q8N3R9 675 aa22.22■■□□□ 1.15
CCDC38-201ENST00000344280 BEST2Q8NFU1 509 aa22.22■■□□□ 1.15
CCDC38-201ENST00000344280 TMEM40Q8WWA1 233 aa22.22■■□□□ 1.15
CCDC38-201ENST00000344280 NDRG1Q92597 394 aaKnown RBP22.22■■□□□ 1.15
CCDC38-201ENST00000344280 GCOM2Q9BZD3 368 aaPredicted RBP22.22■■□□□ 1.15
CCDC38-201ENST00000344280 KLC2Q9H0B6 622 aa22.22■■□□□ 1.15
CCDC38-201ENST00000344280 VPS11Q9H270 941 aa22.22■■□□□ 1.15
CCDC38-201ENST00000344280 RNF39Q9H2S5 420 aa22.22■■□□□ 1.15
CCDC38-201ENST00000344280 DERAQ9Y315 318 aa22.22■■□□□ 1.15
CCDC38-201ENST00000344280 DHRS4L1P0CG22 281 aa22.21■■□□□ 1.15
CCDC38-201ENST00000344280 SLC8A1P32418 973 aa22.21■■□□□ 1.15
CCDC38-201ENST00000344280 GRIA1P42261 906 aa22.21■■□□□ 1.15
CCDC38-201ENST00000344280 SLC18A2Q05940 514 aa22.21■■□□□ 1.15
CCDC38-201ENST00000344280 ARHGAP17Q68EM7 881 aa22.21■■□□□ 1.15
CCDC38-201ENST00000344280 ZNF467Q7Z7K2 595 aaPredicted RBP22.21■■□□□ 1.15
CCDC38-201ENST00000344280 LRRC52Q8N7C0 313 aa22.21■■□□□ 1.15
CCDC38-201ENST00000344280 NETO2Q8NC67 525 aa22.21■■□□□ 1.15
CCDC38-201ENST00000344280 BRI3BPQ8WY22 251 aa22.21■■□□□ 1.15
CCDC38-201ENST00000344280 STAMBPL1Q96FJ0 436 aa22.21■■□□□ 1.15
CCDC38-201ENST00000344280 APOPT1Q96IL0 206 aa22.21■■□□□ 1.15
CCDC38-201ENST00000344280 KCTD15Q96SI1 283 aaPredicted RBP22.21■■□□□ 1.15
CCDC38-201ENST00000344280 TXLNGQ9NUQ3 528 aa22.21■■□□□ 1.15
CCDC38-201ENST00000344280 CCL15-CCL14A0A0B4J2E2 113 aa22.2■■□□□ 1.15
CCDC38-201ENST00000344280 SLC15A5A6NIM6 579 aa22.2■■□□□ 1.15
CCDC38-201ENST00000344280 STRNO43815 780 aa22.2■■□□□ 1.15
CCDC38-201ENST00000344280 DPYSL2Q16555 572 aa22.2■■□□□ 1.15
CCDC38-201ENST00000344280 CCL15Q16663 113 aa22.2■■□□□ 1.15
CCDC38-201ENST00000344280 PRAMEF19Q5SWL8 479 aa22.2■■□□□ 1.15
CCDC38-201ENST00000344280 NPLOC4Q8TAT6 608 aa22.2■■□□□ 1.15
CCDC38-201ENST00000344280 TTC17Q96AE7 1141 aa22.2■■□□□ 1.15
CCDC38-201ENST00000344280 LENG1Q96BZ8 264 aaPredicted RBP22.2■■□□□ 1.15
CCDC38-201ENST00000344280 PNPLA8Q9NP80 782 aa22.2■■□□□ 1.15
CCDC38-201ENST00000344280 CNTN3Q9P232 1028 aa22.2■■□□□ 1.15
CCDC38-201ENST00000344280 AP4E1Q9UPM8 1137 aa22.2■■□□□ 1.15
CCDC38-201ENST00000344280 CFAP69A5D8W1 941 aa22.2■■□□□ 1.14
CCDC38-201ENST00000344280 TRIM49D1C9J1S8 452 aa22.2■■□□□ 1.14
CCDC38-201ENST00000344280 F5H423 210 aaPredicted RBP22.2■■□□□ 1.14
CCDC38-201ENST00000344280 DCTN3O75935 186 aa22.2■■□□□ 1.14
CCDC38-201ENST00000344280 ALDH3A1P30838 453 aa22.2■■□□□ 1.14
CCDC38-201ENST00000344280 TAF1BQ53T94 588 aaPredicted RBP22.2■■□□□ 1.14
CCDC38-201ENST00000344280 NOTUMQ6P988 496 aa22.2■■□□□ 1.14
CCDC38-201ENST00000344280 SLC26A9Q7LBE3 791 aa22.2■■□□□ 1.14
CCDC38-201ENST00000344280 MTDHQ86UE4 582 aaKnown RBP22.2■■□□□ 1.14
CCDC38-201ENST00000344280 SLC26A11Q86WA9 606 aa22.2■■□□□ 1.14
CCDC38-201ENST00000344280 UNC93AQ86WB7 457 aa22.2■■□□□ 1.14
CCDC38-201ENST00000344280 STK32AQ8WU08 396 aa22.2■■□□□ 1.14
CCDC38-201ENST00000344280 CENPIQ92674 756 aaPredicted RBP22.2■■□□□ 1.14
CCDC38-201ENST00000344280 TINF2Q9BSI4 451 aa22.2■■□□□ 1.14
CCDC38-201ENST00000344280 TRIM6Q9C030 488 aaPredicted RBP22.2■■□□□ 1.14
CCDC38-201ENST00000344280 SMIM10L2AP0DMW4 78 aa22.19■■□□□ 1.14
CCDC38-201ENST00000344280 SMIM10L2BP0DMW5 78 aa22.19■■□□□ 1.14
CCDC38-201ENST00000344280 MAGEA6P43360 314 aa22.19■■□□□ 1.14
CCDC38-201ENST00000344280 PTPN9P43378 593 aa22.19■■□□□ 1.14
CCDC38-201ENST00000344280 BST2Q10589 180 aaKnown RBP22.19■■□□□ 1.14
CCDC38-201ENST00000344280 FBXO47Q5MNV8 452 aa22.19■■□□□ 1.14
CCDC38-201ENST00000344280 TRMT10BQ6PF06 316 aaKnown RBP22.19■■□□□ 1.14
CCDC38-201ENST00000344280 KCNT2Q6UVM3 1135 aa22.19■■□□□ 1.14
CCDC38-201ENST00000344280 ANKRD52Q8NB46 1076 aa22.19■■□□□ 1.14
CCDC38-201ENST00000344280 SLC2A14Q8TDB8 520 aa22.19■■□□□ 1.14
CCDC38-201ENST00000344280 GTF3C2Q8WUA4 911 aaPredicted RBP22.19■■□□□ 1.14
CCDC38-201ENST00000344280 SLC7A6OSQ96CW6 309 aaPredicted RBP22.19■■□□□ 1.14
CCDC38-201ENST00000344280 L3MBTL3Q96JM7 780 aaPredicted RBP22.19■■□□□ 1.14
CCDC38-201ENST00000344280 CSPG4P5Q96PW8 444 aa22.19■■□□□ 1.14
CCDC38-201ENST00000344280 RALGAPA2Q2PPJ7 1873 aa22.19■■□□□ 1.14
CCDC38-201ENST00000344280 C2CD2LO14523 706 aa22.19■■□□□ 1.14
CCDC38-201ENST00000344280 SPAG6O75602 509 aa22.19■■□□□ 1.14
CCDC38-201ENST00000344280 BGNP21810 368 aa22.19■■□□□ 1.14
CCDC38-201ENST00000344280 TKTP29401 623 aaKnown RBP22.19■■□□□ 1.14
CCDC38-201ENST00000344280 GNL1P36915 607 aaPredicted RBP22.19■■□□□ 1.14
CCDC38-201ENST00000344280 SOX4Q06945 474 aaPredicted RBP22.19■■□□□ 1.14
CCDC38-201ENST00000344280 BMPR2Q13873 1038 aa22.19■■□□□ 1.14
CCDC38-201ENST00000344280 GRB14Q14449 540 aa22.19■■□□□ 1.14
CCDC38-201ENST00000344280 DPY19L2Q6NUT2 758 aa22.19■■□□□ 1.14
CCDC38-201ENST00000344280 UNC5AQ6ZN44 842 aa22.19■■□□□ 1.14
CCDC38-201ENST00000344280 LRMDAQ9H2I8 198 aa22.19■■□□□ 1.14
CCDC38-201ENST00000344280 SMIM28A0A1B0GU29 152 aa22.18■■□□□ 1.14
CCDC38-201ENST00000344280 A6NJR5 290 aa22.18■■□□□ 1.14
CCDC38-201ENST00000344280 PIRO00625 290 aa22.18■■□□□ 1.14
CCDC38-201ENST00000344280 DYNC1LI2O43237 492 aaPredicted RBP22.18■■□□□ 1.14
CCDC38-201ENST00000344280 DARSP14868 501 aaKnown RBP22.18■■□□□ 1.14
CCDC38-201ENST00000344280 AMPD1P23109 780 aa22.18■■□□□ 1.14
CCDC38-201ENST00000344280 SLC45A4Q5BKX6 768 aa22.18■■□□□ 1.14
CCDC38-201ENST00000344280 FYB2Q5VWT5 728 aa22.18■■□□□ 1.14
CCDC38-201ENST00000344280 ZDHHC17Q8IUH5 632 aa22.18■■□□□ 1.14
CCDC38-201ENST00000344280 ABHD16BQ9H3Z7 469 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms