RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 MRPS17Q9Y2R5 130 aaKnown RBP14.17□□□□□ -0.14
HERPUD1-202ENST00000344114 MYO16Q9Y6X6 1858 aa14.16□□□□□ -0.14
HERPUD1-202ENST00000344114 FAM170AA1A519 330 aa14.16□□□□□ -0.14
HERPUD1-202ENST00000344114 TMEM189-UBE2V1I3L0A0 370 aa14.16□□□□□ -0.14
HERPUD1-202ENST00000344114 PIRO00625 290 aa14.16□□□□□ -0.14
HERPUD1-202ENST00000344114 RHOP08100 348 aa14.16□□□□□ -0.14
HERPUD1-202ENST00000344114 LRPAP1P30533 357 aa14.16□□□□□ -0.14
HERPUD1-202ENST00000344114 SLC1A1P43005 524 aa14.16□□□□□ -0.14
HERPUD1-202ENST00000344114 TAF6P49848 677 aa14.16□□□□□ -0.14
HERPUD1-202ENST00000344114 GSCP56915 257 aaPredicted RBP14.16□□□□□ -0.14
HERPUD1-202ENST00000344114 SGO2Q562F6 1265 aa14.16□□□□□ -0.14
HERPUD1-202ENST00000344114 MMS22LQ6ZRQ5 1243 aa14.16□□□□□ -0.14
HERPUD1-202ENST00000344114 UNC93AQ86WB7 457 aa14.16□□□□□ -0.14
HERPUD1-202ENST00000344114 MCRS1Q96EZ8 462 aa14.16□□□□□ -0.14
HERPUD1-202ENST00000344114 PPP1R10Q96QC0 940 aaKnown RBP14.16□□□□□ -0.14
HERPUD1-202ENST00000344114 NAP1L3Q99457 506 aaPredicted RBP14.16□□□□□ -0.14
HERPUD1-202ENST00000344114 ZSWIM1Q9BR11 485 aa14.16□□□□□ -0.14
HERPUD1-202ENST00000344114 IER2Q9BTL4 223 aa14.16□□□□□ -0.14
HERPUD1-202ENST00000344114 NT5C1AQ9BXI3 368 aa14.16□□□□□ -0.14
HERPUD1-202ENST00000344114 CHRDQ9H2X0 955 aa14.16□□□□□ -0.14
HERPUD1-202ENST00000344114 GDAP2Q9NXN4 497 aa14.16□□□□□ -0.14
HERPUD1-202ENST00000344114 HMGXB4Q9UGU5 601 aa14.16□□□□□ -0.14
HERPUD1-202ENST00000344114 RAB21Q9UL25 225 aa14.16□□□□□ -0.14
HERPUD1-202ENST00000344114 TTC7AQ9ULT0 858 aaPredicted RBP14.16□□□□□ -0.14
HERPUD1-202ENST00000344114 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.16□□□□□ -0.14
HERPUD1-202ENST00000344114 MRPS23Q9Y3D9 190 aaKnown RBP14.16□□□□□ -0.14
HERPUD1-202ENST00000344114 SPTBN2O15020 2390 aa14.15□□□□□ -0.14
HERPUD1-202ENST00000344114 ZNF638Q14966 1978 aaKnown RBP14.15□□□□□ -0.14
HERPUD1-202ENST00000344114 CCDC66A2RUB6 948 aa14.15□□□□□ -0.14
HERPUD1-202ENST00000344114 CCDC151A5D8V7 595 aa14.15□□□□□ -0.14
HERPUD1-202ENST00000344114 TMEM110-MUSTN1A8MSY1 372 aa14.15□□□□□ -0.14
HERPUD1-202ENST00000344114 PPEF2O14830 753 aa14.15□□□□□ -0.14
HERPUD1-202ENST00000344114 SPOPO43791 374 aa14.15□□□□□ -0.14
HERPUD1-202ENST00000344114 CEP104O60308 925 aa14.15□□□□□ -0.14
HERPUD1-202ENST00000344114 RHOXF2BP0C7M4 288 aa14.15□□□□□ -0.14
HERPUD1-202ENST00000344114 COMTP21964 271 aa14.15□□□□□ -0.14
HERPUD1-202ENST00000344114 FCARP24071 287 aa14.15□□□□□ -0.14
HERPUD1-202ENST00000344114 MAN1A1P33908 653 aa14.15□□□□□ -0.14
HERPUD1-202ENST00000344114 CTNNA1P35221 906 aaKnown RBP14.15□□□□□ -0.14
HERPUD1-202ENST00000344114 NDST1P52848 882 aa14.15□□□□□ -0.14
HERPUD1-202ENST00000344114 BRD3Q15059 726 aa14.15□□□□□ -0.14
HERPUD1-202ENST00000344114 GLE1Q53GS7 698 aaKnown RBP14.15□□□□□ -0.14
HERPUD1-202ENST00000344114 TANGO2Q6ICL3 276 aa14.15□□□□□ -0.14
HERPUD1-202ENST00000344114 CD101Q93033 1021 aa14.15□□□□□ -0.14
HERPUD1-202ENST00000344114 MS4A14Q96JA4 679 aa14.15□□□□□ -0.14
HERPUD1-202ENST00000344114 TWNKQ96RR1 684 aa14.15□□□□□ -0.14
HERPUD1-202ENST00000344114 RHOXF2Q9BQY4 288 aa14.15□□□□□ -0.14
HERPUD1-202ENST00000344114 PARD6BQ9BYG5 372 aa14.15□□□□□ -0.14
HERPUD1-202ENST00000344114 PARVAQ9NVD7 372 aa14.15□□□□□ -0.14
HERPUD1-202ENST00000344114 EHD2Q9NZN4 543 aa14.15□□□□□ -0.14
HERPUD1-202ENST00000344114 SNX9Q9Y5X1 595 aa14.15□□□□□ -0.14
HERPUD1-202ENST00000344114 BACE2Q9Y5Z0 518 aa14.15□□□□□ -0.14
HERPUD1-202ENST00000344114 CDY1Q9Y6F8 540 aa14.15□□□□□ -0.14
HERPUD1-202ENST00000344114 ARHGEF37A1IGU5 675 aa14.14□□□□□ -0.15
HERPUD1-202ENST00000344114 CCDC188H7C350 402 aa14.14□□□□□ -0.15
HERPUD1-202ENST00000344114 MYO1FO00160 1098 aa14.14□□□□□ -0.15
HERPUD1-202ENST00000344114 MAN2B1O00754 1011 aa14.14□□□□□ -0.15
HERPUD1-202ENST00000344114 LRP3O75074 770 aa14.14□□□□□ -0.15
HERPUD1-202ENST00000344114 CEBPBP17676 345 aa14.14□□□□□ -0.15
HERPUD1-202ENST00000344114 IGFBP6P24592 240 aaPredicted RBP14.14□□□□□ -0.15
HERPUD1-202ENST00000344114 NRLP54845 237 aa14.14□□□□□ -0.15
HERPUD1-202ENST00000344114 MAMLD1Q13495 774 aa14.14□□□□□ -0.15
HERPUD1-202ENST00000344114 CNGA2Q16280 664 aa14.14□□□□□ -0.15
HERPUD1-202ENST00000344114 ST3GAL2Q16842 350 aa14.14□□□□□ -0.15
HERPUD1-202ENST00000344114 PRSS36Q5K4E3 855 aa14.14□□□□□ -0.15
HERPUD1-202ENST00000344114 SEL1L2Q5TEA6 688 aa14.14□□□□□ -0.15
HERPUD1-202ENST00000344114 LAIR1Q6GTX8 287 aa14.14□□□□□ -0.15
HERPUD1-202ENST00000344114 WDR93Q6P2C0 686 aa14.14□□□□□ -0.15
HERPUD1-202ENST00000344114 DNAJC24Q6P3W2 148 aa14.14□□□□□ -0.15
HERPUD1-202ENST00000344114 CD300LGQ6UXG3 332 aa14.14□□□□□ -0.15
HERPUD1-202ENST00000344114 ERICH1Q86X53 443 aa14.14□□□□□ -0.15
HERPUD1-202ENST00000344114 C3orf20Q8ND61 904 aa14.14□□□□□ -0.15
HERPUD1-202ENST00000344114 NETO1Q8TDF5 533 aa14.14□□□□□ -0.15
HERPUD1-202ENST00000344114 DDX27Q96GQ7 796 aaKnown RBP14.14□□□□□ -0.15
HERPUD1-202ENST00000344114 MIS12Q9H081 205 aa14.14□□□□□ -0.15
HERPUD1-202ENST00000344114 WDR35Q9P2L0 1181 aa14.14□□□□□ -0.15
HERPUD1-202ENST00000344114 TMEM59LQ9UK28 342 aa14.14□□□□□ -0.15
HERPUD1-202ENST00000344114 RALGAPA1Q6GYQ0 2036 aa14.14□□□□□ -0.15
HERPUD1-202ENST00000344114 TCRBV5S1A1TA0A578 114 aa14.13□□□□□ -0.15
HERPUD1-202ENST00000344114 KPNA7A9QM74 516 aa14.13□□□□□ -0.15
HERPUD1-202ENST00000344114 M0QYV0 167 aa14.13□□□□□ -0.15
HERPUD1-202ENST00000344114 O00370 1275 aa14.13□□□□□ -0.15
HERPUD1-202ENST00000344114 SLC30A4O14863 429 aa14.13□□□□□ -0.15
HERPUD1-202ENST00000344114 ERLIN1O75477 346 aa14.13□□□□□ -0.15
HERPUD1-202ENST00000344114 MICAL2O94851 1124 aa14.13□□□□□ -0.15
HERPUD1-202ENST00000344114 PROSCO94903 275 aa14.13□□□□□ -0.15
HERPUD1-202ENST00000344114 FAM163BP0C2L3 166 aa14.13□□□□□ -0.15
HERPUD1-202ENST00000344114 PTPN2P17706 415 aa14.13□□□□□ -0.15
HERPUD1-202ENST00000344114 CLCN6P51797 869 aa14.13□□□□□ -0.15
HERPUD1-202ENST00000344114 SOX4Q06945 474 aaPredicted RBP14.13□□□□□ -0.15
HERPUD1-202ENST00000344114 SPEM2Q0P670 501 aa14.13□□□□□ -0.15
HERPUD1-202ENST00000344114 DCAF12L1Q5VU92 463 aa14.13□□□□□ -0.15
HERPUD1-202ENST00000344114 C8orf74Q6P047 294 aa14.13□□□□□ -0.15
HERPUD1-202ENST00000344114 DENND1BQ6P3S1 775 aa14.13□□□□□ -0.15
HERPUD1-202ENST00000344114 LCLAT1Q6UWP7 414 aa14.13□□□□□ -0.15
HERPUD1-202ENST00000344114 ANKS3Q6ZW76 656 aa14.13□□□□□ -0.15
HERPUD1-202ENST00000344114 DPH6Q7L8W6 267 aa14.13□□□□□ -0.15
HERPUD1-202ENST00000344114 LIMS2Q7Z4I7 341 aa14.13□□□□□ -0.15
HERPUD1-202ENST00000344114 TOP6BLQ8N6T0 577 aa14.13□□□□□ -0.15
HERPUD1-202ENST00000344114 CELF5Q8N6W0 485 aaKnown RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms