RNA–Protein interactions for RNA: ENST00000342631.7

SNED1-202, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best) BASIC

Gene SNED1, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-202ENST00000342631 SYT10Q6XYQ8 523 aa17.06■□□□□ 0.32
SNED1-202ENST00000342631 RSRC2Q7L4I2 434 aaKnown RBP17.06■□□□□ 0.32
SNED1-202ENST00000342631 FAM172AQ8WUF8 416 aa17.06■□□□□ 0.32
SNED1-202ENST00000342631 EDEM1Q92611 657 aa17.06■□□□□ 0.32
SNED1-202ENST00000342631 CD101Q93033 1021 aa17.06■□□□□ 0.32
SNED1-202ENST00000342631 LRRC3Q9BY71 257 aa17.06■□□□□ 0.32
SNED1-202ENST00000342631 DNAI1Q9UI46 699 aa17.06■□□□□ 0.32
SNED1-202ENST00000342631 SOBPA7XYQ1 873 aa17.06■□□□□ 0.32
SNED1-202ENST00000342631 PSTPIP1O43586 416 aa17.06■□□□□ 0.32
SNED1-202ENST00000342631 LRCH4O75427 683 aa17.06■□□□□ 0.32
SNED1-202ENST00000342631 RFPL2O75678 378 aa17.06■□□□□ 0.32
SNED1-202ENST00000342631 FTCDO95954 541 aa17.06■□□□□ 0.32
SNED1-202ENST00000342631 CTNNA2P26232 953 aa17.06■□□□□ 0.32
SNED1-202ENST00000342631 ATP11AP98196 1134 aa17.06■□□□□ 0.32
SNED1-202ENST00000342631 HYAL1Q12794 435 aa17.06■□□□□ 0.32
SNED1-202ENST00000342631 NNTQ13423 1086 aa17.06■□□□□ 0.32
SNED1-202ENST00000342631 GRIN2CQ14957 1233 aa17.06■□□□□ 0.32
SNED1-202ENST00000342631 RPS6KA1Q15418 735 aa17.06■□□□□ 0.32
SNED1-202ENST00000342631 TCEAL5Q5H9L2 206 aa17.06■□□□□ 0.32
SNED1-202ENST00000342631 POLNQ7Z5Q5 900 aa17.06■□□□□ 0.32
SNED1-202ENST00000342631 TMC8Q8IU68 726 aa17.06■□□□□ 0.32
SNED1-202ENST00000342631 RHOT1Q8IXI2 618 aa17.06■□□□□ 0.32
SNED1-202ENST00000342631 UBL4BQ8N7F7 174 aa17.06■□□□□ 0.32
SNED1-202ENST00000342631 DQX1Q8TE96 717 aaKnown RBP17.06■□□□□ 0.32
SNED1-202ENST00000342631 HES6Q96HZ4 224 aa17.06■□□□□ 0.32
SNED1-202ENST00000342631 GCNAQ96QF7 691 aa17.06■□□□□ 0.32
SNED1-202ENST00000342631 TBCBQ99426 244 aa17.06■□□□□ 0.32
SNED1-202ENST00000342631 GOLPH3Q9H4A6 298 aa17.06■□□□□ 0.32
SNED1-202ENST00000342631 IL21Q9HBE4 155 aa17.06■□□□□ 0.32
SNED1-202ENST00000342631 OSER1Q9NX31 292 aa17.06■□□□□ 0.32
SNED1-202ENST00000342631 ZMYM5Q9UJ78 669 aa17.06■□□□□ 0.32
SNED1-202ENST00000342631 CCDC195A0A1B0GUA6 201 aa17.05■□□□□ 0.32
SNED1-202ENST00000342631 M0QYT0 321 aa17.05■□□□□ 0.32
SNED1-202ENST00000342631 TRUB2O95900 331 aaKnown RBP17.05■□□□□ 0.32
SNED1-202ENST00000342631 IGLV3-25P01717 112 aa17.05■□□□□ 0.32
SNED1-202ENST00000342631 KRT7P08729 469 aa17.05■□□□□ 0.32
SNED1-202ENST00000342631 CTNNA1P35221 906 aaKnown RBP17.05■□□□□ 0.32
SNED1-202ENST00000342631 RDXP35241 583 aaKnown RBP17.05■□□□□ 0.32
SNED1-202ENST00000342631 KPNA1P52294 538 aaPredicted RBP17.05■□□□□ 0.32
SNED1-202ENST00000342631 C15orf59Q2T9L4 293 aaPredicted RBP17.05■□□□□ 0.32
SNED1-202ENST00000342631 HECTD3Q5T447 861 aa17.05■□□□□ 0.32
SNED1-202ENST00000342631 SND1Q7KZF4 910 aaKnown RBP eCLIP17.05■□□□□ 0.32
SNED1-202ENST00000342631 KIF18AQ8NI77 898 aa17.05■□□□□ 0.32
SNED1-202ENST00000342631 SERPINB11Q96P15 392 aa17.05■□□□□ 0.32
SNED1-202ENST00000342631 ZNF334Q9HCZ1 680 aaPredicted RBP17.05■□□□□ 0.32
SNED1-202ENST00000342631 USTQ9Y2C2 406 aa17.05■□□□□ 0.32
SNED1-202ENST00000342631 PCDHA3Q9Y5H8 950 aa17.05■□□□□ 0.32
SNED1-202ENST00000342631 TLR5O60602 858 aa17.04■□□□□ 0.32
SNED1-202ENST00000342631 PRLRP16471 622 aa17.04■□□□□ 0.32
SNED1-202ENST00000342631 HOXB8P17481 243 aaPredicted RBP17.04■□□□□ 0.32
SNED1-202ENST00000342631 PGFP49763 221 aa17.04■□□□□ 0.32
SNED1-202ENST00000342631 AIF1P55008 147 aa17.04■□□□□ 0.32
SNED1-202ENST00000342631 HDAC4P56524 1084 aa17.04■□□□□ 0.32
SNED1-202ENST00000342631 DEUP1Q05D60 604 aa17.04■□□□□ 0.32
SNED1-202ENST00000342631 CDO1Q16878 200 aa17.04■□□□□ 0.32
SNED1-202ENST00000342631 BOLA3Q53S33 107 aa17.04■□□□□ 0.32
SNED1-202ENST00000342631 ARFGAP1Q8N6T3 406 aa17.04■□□□□ 0.32
SNED1-202ENST00000342631 MRPS31Q92665 395 aaKnown RBP17.04■□□□□ 0.32
SNED1-202ENST00000342631 CORO1BQ9BR76 489 aa17.04■□□□□ 0.32
SNED1-202ENST00000342631 TLR10Q9BXR5 811 aa17.04■□□□□ 0.32
SNED1-202ENST00000342631 FAM204AQ9H8W3 233 aa17.04■□□□□ 0.32
SNED1-202ENST00000342631 USP18Q9UMW8 372 aa17.04■□□□□ 0.32
SNED1-202ENST00000342631 MTCH2Q9Y6C9 303 aa17.04■□□□□ 0.32
SNED1-202ENST00000342631 DENND4CQ5VZ89 1909 aa17.04■□□□□ 0.32
SNED1-202ENST00000342631 CLUHO75153 1309 aa17.04■□□□□ 0.32
SNED1-202ENST00000342631 ZNF197O14709 1029 aa17.04■□□□□ 0.32
SNED1-202ENST00000342631 PRPSAP2O60256 369 aa17.04■□□□□ 0.32
SNED1-202ENST00000342631 TADA3O75528 432 aa17.04■□□□□ 0.32
SNED1-202ENST00000342631 DDX6P26196 483 aaKnown RBP eCLIP17.04■□□□□ 0.32
SNED1-202ENST00000342631 GABRR2P28476 465 aa17.04■□□□□ 0.32
SNED1-202ENST00000342631 MIPP30301 263 aa17.04■□□□□ 0.32
SNED1-202ENST00000342631 ATP5C1P36542 298 aaKnown RBP17.04■□□□□ 0.32
SNED1-202ENST00000342631 MTA1Q13330 715 aa17.04■□□□□ 0.32
SNED1-202ENST00000342631 EIF4EBP2Q13542 120 aaPredicted RBP17.04■□□□□ 0.32
SNED1-202ENST00000342631 PAPD7Q5XG87 772 aaKnown RBP17.04■□□□□ 0.32
SNED1-202ENST00000342631 TMEM150AQ86TG1 271 aa17.04■□□□□ 0.32
SNED1-202ENST00000342631 PSTKQ8IV42 348 aaKnown RBP17.04■□□□□ 0.32
SNED1-202ENST00000342631 VN1R2Q8NFZ6 395 aa17.04■□□□□ 0.32
SNED1-202ENST00000342631 ZNF707Q96C28 371 aaPredicted RBP17.04■□□□□ 0.32
SNED1-202ENST00000342631 IGFLR1Q9H665 355 aa17.04■□□□□ 0.32
SNED1-202ENST00000342631 DDIT4Q9NX09 232 aa17.04■□□□□ 0.32
SNED1-202ENST00000342631 DNMT3LQ9UJW3 386 aa17.04■□□□□ 0.32
SNED1-202ENST00000342631 HYOU1Q9Y4L1 999 aa17.04■□□□□ 0.32
SNED1-202ENST00000342631 ANAPC1Q9H1A4 1944 aa17.03■□□□□ 0.32
SNED1-202ENST00000342631 IRAK2O43187 625 aa17.03■□□□□ 0.32
SNED1-202ENST00000342631 SLC2A3P11169 496 aa17.03■□□□□ 0.32
SNED1-202ENST00000342631 SSR1P43307 286 aaKnown RBP17.03■□□□□ 0.32
SNED1-202ENST00000342631 SLC25A11Q02978 314 aaKnown RBP17.03■□□□□ 0.32
SNED1-202ENST00000342631 ADAM15Q13444 863 aa17.03■□□□□ 0.32
SNED1-202ENST00000342631 C10orf120Q5SQS8 335 aa17.03■□□□□ 0.32
SNED1-202ENST00000342631 SH3PXD2AQ5TCZ1 1133 aa17.03■□□□□ 0.32
SNED1-202ENST00000342631 OTUD1Q5VV17 481 aaPredicted RBP17.03■□□□□ 0.32
SNED1-202ENST00000342631 GAREM2Q75VX8 874 aa17.03■□□□□ 0.32
SNED1-202ENST00000342631 PDZD4Q76G19 769 aaPredicted RBP17.03■□□□□ 0.32
SNED1-202ENST00000342631 TAC4Q86UU9 113 aa17.03■□□□□ 0.32
SNED1-202ENST00000342631 HOMEZQ8IX15 550 aa17.03■□□□□ 0.32
SNED1-202ENST00000342631 GAS2L1Q99501 681 aaPredicted RBP17.03■□□□□ 0.32
SNED1-202ENST00000342631 DDX56Q9NY93 547 aaKnown RBP17.03■□□□□ 0.32
SNED1-202ENST00000342631 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.03■□□□□ 0.32
SNED1-202ENST00000342631 DNMT3BQ9UBC3 853 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms