RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 MGEA5O60502 916 aa15.62■□□□□ 0.09
TPM3-208ENST00000341485 CCL5P13501 91 aa15.62■□□□□ 0.09
TPM3-208ENST00000341485 PHBP35232 272 aa15.62■□□□□ 0.09
TPM3-208ENST00000341485 RDXP35241 583 aaKnown RBP15.62■□□□□ 0.09
TPM3-208ENST00000341485 TAF6P49848 677 aa15.62■□□□□ 0.09
TPM3-208ENST00000341485 BASP1P80723 227 aaKnown RBP15.62■□□□□ 0.09
TPM3-208ENST00000341485 MTM1Q13496 603 aa15.62■□□□□ 0.09
TPM3-208ENST00000341485 BBS9Q3SYG4 887 aa15.62■□□□□ 0.09
TPM3-208ENST00000341485 PKDCCQ504Y2 493 aa15.62■□□□□ 0.09
TPM3-208ENST00000341485 ICE2Q659A1 982 aa15.62■□□□□ 0.09
TPM3-208ENST00000341485 PMF1Q6P1K2 205 aa15.62■□□□□ 0.09
TPM3-208ENST00000341485 DARS2Q6PI48 645 aaKnown RBP15.62■□□□□ 0.09
TPM3-208ENST00000341485 ZC3H18Q86VM9 953 aaKnown RBP15.62■□□□□ 0.09
TPM3-208ENST00000341485 TTC30AQ86WT1 665 aa15.62■□□□□ 0.09
TPM3-208ENST00000341485 SMC6Q96SB8 1091 aa15.62■□□□□ 0.09
TPM3-208ENST00000341485 GAD1Q99259 594 aa15.62■□□□□ 0.09
TPM3-208ENST00000341485 ADAM2Q99965 735 aa15.62■□□□□ 0.09
TPM3-208ENST00000341485 DHRS4Q9BTZ2 278 aa15.62■□□□□ 0.09
TPM3-208ENST00000341485 SEZ6LQ9BYH1 1024 aa15.62■□□□□ 0.09
TPM3-208ENST00000341485 MIS12Q9H081 205 aa15.62■□□□□ 0.09
TPM3-208ENST00000341485 PAK6Q9NQU5 681 aaPredicted RBP15.62■□□□□ 0.09
TPM3-208ENST00000341485 SLC38A7Q9NVC3 462 aa15.62■□□□□ 0.09
TPM3-208ENST00000341485 GRID1Q9ULK0 1009 aa15.62■□□□□ 0.09
TPM3-208ENST00000341485 SMG5Q9UPR3 1016 aaKnown RBP15.62■□□□□ 0.09
TPM3-208ENST00000341485 DPYSL4O14531 572 aa15.61■□□□□ 0.09
TPM3-208ENST00000341485 PTGESO14684 152 aa15.61■□□□□ 0.09
TPM3-208ENST00000341485 TYROBPO43914 113 aa15.61■□□□□ 0.09
TPM3-208ENST00000341485 PRPSAP2O60256 369 aa15.61■□□□□ 0.09
TPM3-208ENST00000341485 RPA3P35244 121 aaPredicted RBP15.61■□□□□ 0.09
TPM3-208ENST00000341485 RNASELQ05823 741 aaKnown RBP15.61■□□□□ 0.09
TPM3-208ENST00000341485 SOX4Q06945 474 aaPredicted RBP15.61■□□□□ 0.09
TPM3-208ENST00000341485 STILQ15468 1287 aa15.61■□□□□ 0.09
TPM3-208ENST00000341485 SV2CQ496J9 727 aa15.61■□□□□ 0.09
TPM3-208ENST00000341485 OLFML1Q6UWY5 402 aa15.61■□□□□ 0.09
TPM3-208ENST00000341485 C3orf62Q6ZUJ4 267 aa15.61■□□□□ 0.09
TPM3-208ENST00000341485 FAM47EQ6ZV65 393 aa15.61■□□□□ 0.09
TPM3-208ENST00000341485 ACOT1Q86TX2 421 aa15.61■□□□□ 0.09
TPM3-208ENST00000341485 FBF1Q8TES7 1133 aa15.61■□□□□ 0.09
TPM3-208ENST00000341485 PGBD4Q96DM1 585 aa15.61■□□□□ 0.09
TPM3-208ENST00000341485 RNF157Q96PX1 679 aa15.61■□□□□ 0.09
TPM3-208ENST00000341485 PPP1R10Q96QC0 940 aaKnown RBP15.61■□□□□ 0.09
TPM3-208ENST00000341485 ACSS3Q9H6R3 686 aa15.61■□□□□ 0.09
TPM3-208ENST00000341485 GPATCH2LQ9NWQ4 482 aa15.61■□□□□ 0.09
TPM3-208ENST00000341485 WBP1LQ9NX94 342 aa15.61■□□□□ 0.09
TPM3-208ENST00000341485 FETUBQ9UGM5 382 aa15.61■□□□□ 0.09
TPM3-208ENST00000341485 SMAPO00193 183 aa15.61■□□□□ 0.09
TPM3-208ENST00000341485 GABBR2O75899 941 aa15.61■□□□□ 0.09
TPM3-208ENST00000341485 PIAS1O75925 651 aa15.61■□□□□ 0.09
TPM3-208ENST00000341485 THP07101 528 aa15.61■□□□□ 0.09
TPM3-208ENST00000341485 SKIP12755 728 aa15.61■□□□□ 0.09
TPM3-208ENST00000341485 ATP11AP98196 1134 aa15.61■□□□□ 0.09
TPM3-208ENST00000341485 MGAT5Q09328 741 aa15.61■□□□□ 0.09
TPM3-208ENST00000341485 TFDP2Q14188 446 aa15.61■□□□□ 0.09
TPM3-208ENST00000341485 SPARCL1Q14515 664 aa15.61■□□□□ 0.09
TPM3-208ENST00000341485 DSC3Q14574 896 aa15.61■□□□□ 0.09
TPM3-208ENST00000341485 SLC1A5Q15758 541 aa15.61■□□□□ 0.09
TPM3-208ENST00000341485 FAM182AQ5T1J6 154 aa15.61■□□□□ 0.09
TPM3-208ENST00000341485 C1orf228Q6PIY5 440 aa15.61■□□□□ 0.09
TPM3-208ENST00000341485 MRPL10Q7Z7H8 261 aaKnown RBP15.61■□□□□ 0.09
TPM3-208ENST00000341485 SPOCK2Q92563 424 aa15.61■□□□□ 0.09
TPM3-208ENST00000341485 KHSRPQ92945 711 aaKnown RBP eCLIP15.61■□□□□ 0.09
TPM3-208ENST00000341485 RMDN2Q96LZ7 410 aa15.61■□□□□ 0.09
TPM3-208ENST00000341485 SLC4A5Q9BY07 1137 aa15.61■□□□□ 0.09
TPM3-208ENST00000341485 FAM49BQ9NUQ9 324 aa15.61■□□□□ 0.09
TPM3-208ENST00000341485 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.6■□□□□ 0.09
TPM3-208ENST00000341485 KPNA7A9QM74 516 aa15.6■□□□□ 0.09
TPM3-208ENST00000341485 IL4RP24394 825 aa15.6■□□□□ 0.09
TPM3-208ENST00000341485 STIP1P31948 543 aaKnown RBP15.6■□□□□ 0.09
TPM3-208ENST00000341485 NCALDP61601 193 aa15.6■□□□□ 0.09
TPM3-208ENST00000341485 KRT81Q14533 505 aa15.6■□□□□ 0.09
TPM3-208ENST00000341485 KCNJ11Q14654 390 aa15.6■□□□□ 0.09
TPM3-208ENST00000341485 ZC3H12AQ5D1E8 599 aaKnown RBP15.6■□□□□ 0.09
TPM3-208ENST00000341485 ADGRD1Q6QNK2 874 aa15.6■□□□□ 0.09
TPM3-208ENST00000341485 AGMOQ6ZNB7 445 aa15.6■□□□□ 0.09
TPM3-208ENST00000341485 IGDCC3Q8IVU1 814 aa15.6■□□□□ 0.09
TPM3-208ENST00000341485 PARP9Q8IXQ6 854 aa15.6■□□□□ 0.09
TPM3-208ENST00000341485 PDIK1LQ8N165 341 aa15.6■□□□□ 0.09
TPM3-208ENST00000341485 CCDC63Q8NA47 563 aa15.6■□□□□ 0.09
TPM3-208ENST00000341485 OR6B3Q8NGW1 331 aa15.6■□□□□ 0.09
TPM3-208ENST00000341485 GRAMD1AQ96CP6 724 aa15.6■□□□□ 0.09
TPM3-208ENST00000341485 PAFAH2Q99487 392 aa15.6■□□□□ 0.09
TPM3-208ENST00000341485 PLCD4Q9BRC7 762 aa15.6■□□□□ 0.09
TPM3-208ENST00000341485 PITPNM3Q9BZ71 974 aa15.6■□□□□ 0.09
TPM3-208ENST00000341485 A0A0U1RQF3 1178 aa15.59■□□□□ 0.09
TPM3-208ENST00000341485 ARL5CA6NH57 179 aa15.59■□□□□ 0.09
TPM3-208ENST00000341485 H7C0C1 242 aa15.59■□□□□ 0.09
TPM3-208ENST00000341485 ZNF623O75123 536 aa15.59■□□□□ 0.09
TPM3-208ENST00000341485 CA4P22748 312 aa15.59■□□□□ 0.09
TPM3-208ENST00000341485 LRPAP1P30533 357 aa15.59■□□□□ 0.09
TPM3-208ENST00000341485 ATP5OP48047 213 aa15.59■□□□□ 0.09
TPM3-208ENST00000341485 ELF3P78545 371 aaPredicted RBP15.59■□□□□ 0.09
TPM3-208ENST00000341485 KLHL38Q2WGJ6 581 aa15.59■□□□□ 0.09
TPM3-208ENST00000341485 SCYL2Q6P3W7 929 aa15.59■□□□□ 0.09
TPM3-208ENST00000341485 RGS9BPQ6ZS82 235 aa15.59■□□□□ 0.09
TPM3-208ENST00000341485 PALM2Q8IXS6 379 aa15.59■□□□□ 0.09
TPM3-208ENST00000341485 PQLC3Q8N755 202 aa15.59■□□□□ 0.09
TPM3-208ENST00000341485 PLD5Q8N7P1 536 aa15.59■□□□□ 0.09
TPM3-208ENST00000341485 MZB1Q8WU39 189 aa15.59■□□□□ 0.09
TPM3-208ENST00000341485 DCAKDQ8WVC6 231 aa15.59■□□□□ 0.09
TPM3-208ENST00000341485 LPIN3Q9BQK8 851 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms