RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 KPNA7A9QM74 516 aa20.89■□□□□ 0.94
SPG7-202ENST00000341316 KBTBD13C9JR72 458 aa20.89■□□□□ 0.94
SPG7-202ENST00000341316 GNL1P36915 607 aaPredicted RBP20.89■□□□□ 0.94
SPG7-202ENST00000341316 KLHL38Q2WGJ6 581 aa20.89■□□□□ 0.94
SPG7-202ENST00000341316 TLK2Q86UE8 772 aa20.89■□□□□ 0.94
SPG7-202ENST00000341316 CRYBG2Q8N1P7 616 aa20.89■□□□□ 0.94
SPG7-202ENST00000341316 ANKRD52Q8NB46 1076 aa20.89■□□□□ 0.94
SPG7-202ENST00000341316 TBCBQ99426 244 aa20.89■□□□□ 0.94
SPG7-202ENST00000341316 C12orf65Q9H3J6 166 aaKnown RBP20.89■□□□□ 0.94
SPG7-202ENST00000341316 DONSONQ9NYP3 566 aa20.89■□□□□ 0.94
SPG7-202ENST00000341316 SUFUQ9UMX1 484 aa20.89■□□□□ 0.94
SPG7-202ENST00000341316 TCRBV9S1A1TA0A576 114 aa20.89■□□□□ 0.93
SPG7-202ENST00000341316 CCND1P24385 295 aa20.89■□□□□ 0.93
SPG7-202ENST00000341316 L1CAMP32004 1257 aa20.89■□□□□ 0.93
SPG7-202ENST00000341316 CDC42EP1Q00587 391 aa20.89■□□□□ 0.93
SPG7-202ENST00000341316 CCDC15Q0P6D6 951 aa20.89■□□□□ 0.93
SPG7-202ENST00000341316 BST2Q10589 180 aaKnown RBP20.89■□□□□ 0.93
SPG7-202ENST00000341316 SLC10A2Q12908 348 aaPredicted RBP20.89■□□□□ 0.93
SPG7-202ENST00000341316 CCDC33Q8N5R6 958 aa20.89■□□□□ 0.93
SPG7-202ENST00000341316 ARRDC4Q8NCT1 418 aa20.89■□□□□ 0.93
SPG7-202ENST00000341316 KLF6Q99612 283 aaPredicted RBP20.89■□□□□ 0.93
SPG7-202ENST00000341316 GOLGA8RI6L899 631 aa20.88■□□□□ 0.93
SPG7-202ENST00000341316 CHADO15335 359 aa20.88■□□□□ 0.93
SPG7-202ENST00000341316 UNC5CO95185 931 aa20.88■□□□□ 0.93
SPG7-202ENST00000341316 CYP2F1P24903 491 aa20.88■□□□□ 0.93
SPG7-202ENST00000341316 PDK4Q16654 411 aa20.88■□□□□ 0.93
SPG7-202ENST00000341316 ZDHHC17Q8IUH5 632 aa20.88■□□□□ 0.93
SPG7-202ENST00000341316 SLC2A14Q8TDB8 520 aa20.88■□□□□ 0.93
SPG7-202ENST00000341316 CENPIQ92674 756 aaPredicted RBP20.88■□□□□ 0.93
SPG7-202ENST00000341316 ZNF670Q9BS34 389 aa20.88■□□□□ 0.93
SPG7-202ENST00000341316 MYLK2Q9H1R3 596 aa20.88■□□□□ 0.93
SPG7-202ENST00000341316 NRDE2Q9H7Z3 1164 aa20.88■□□□□ 0.93
SPG7-202ENST00000341316 MTMR10Q9NXD2 777 aa20.88■□□□□ 0.93
SPG7-202ENST00000341316 PAK5Q9P286 719 aa20.88■□□□□ 0.93
SPG7-202ENST00000341316 BCLAF3A2AJT9 711 aaKnown RBP20.88■□□□□ 0.93
SPG7-202ENST00000341316 ZBED1O96006 694 aa20.88■□□□□ 0.93
SPG7-202ENST00000341316 ZNF865P0CJ78 1059 aaPredicted RBP20.88■□□□□ 0.93
SPG7-202ENST00000341316 TKTP29401 623 aaKnown RBP20.88■□□□□ 0.93
SPG7-202ENST00000341316 SKIV2L2P42285 1042 aaKnown RBP20.88■□□□□ 0.93
SPG7-202ENST00000341316 PTPN9P43378 593 aa20.88■□□□□ 0.93
SPG7-202ENST00000341316 BCAT1P54687 386 aa20.88■□□□□ 0.93
SPG7-202ENST00000341316 GBE1Q04446 702 aa20.88■□□□□ 0.93
SPG7-202ENST00000341316 MORN1Q5T089 497 aa20.88■□□□□ 0.93
SPG7-202ENST00000341316 LVRNQ6Q4G3 990 aa20.88■□□□□ 0.93
SPG7-202ENST00000341316 SLC26A9Q7LBE3 791 aa20.88■□□□□ 0.93
SPG7-202ENST00000341316 CCDC185Q8N715 623 aa20.88■□□□□ 0.93
SPG7-202ENST00000341316 CCDC110Q8TBZ0 833 aa20.88■□□□□ 0.93
SPG7-202ENST00000341316 NDRG1Q92597 394 aaKnown RBP20.88■□□□□ 0.93
SPG7-202ENST00000341316 DHX35Q9H5Z1 703 aaKnown RBP20.88■□□□□ 0.93
SPG7-202ENST00000341316 ETNK1Q9HBU6 452 aa20.88■□□□□ 0.93
SPG7-202ENST00000341316 DIAPH2O60879 1101 aa20.87■□□□□ 0.93
SPG7-202ENST00000341316 IGFBP6P24592 240 aaPredicted RBP20.87■□□□□ 0.93
SPG7-202ENST00000341316 RPL34P49207 117 aaKnown RBP20.87■□□□□ 0.93
SPG7-202ENST00000341316 NAA25Q14CX7 972 aa20.87■□□□□ 0.93
SPG7-202ENST00000341316 CCL14Q16627 93 aa20.87■□□□□ 0.93
SPG7-202ENST00000341316 KBTBD12Q3ZCT8 623 aa20.87■□□□□ 0.93
SPG7-202ENST00000341316 RGS9BPQ6ZS82 235 aa20.87■□□□□ 0.93
SPG7-202ENST00000341316 GDAP2Q9NXN4 497 aa20.87■□□□□ 0.93
SPG7-202ENST00000341316 PHTF1Q9UMS5 762 aa20.87■□□□□ 0.93
SPG7-202ENST00000341316 CD4P01730 458 aa20.87■□□□□ 0.93
SPG7-202ENST00000341316 TSHRP16473 764 aa20.87■□□□□ 0.93
SPG7-202ENST00000341316 PSEN2P49810 448 aa20.87■□□□□ 0.93
SPG7-202ENST00000341316 YWHAZP63104 245 aaKnown RBP20.87■□□□□ 0.93
SPG7-202ENST00000341316 BEX3Q00994 111 aa20.87■□□□□ 0.93
SPG7-202ENST00000341316 DPYSL2Q16555 572 aa20.87■□□□□ 0.93
SPG7-202ENST00000341316 XKR4Q5GH76 650 aa20.87■□□□□ 0.93
SPG7-202ENST00000341316 PRPF39Q86UA1 669 aaKnown RBP20.87■□□□□ 0.93
SPG7-202ENST00000341316 CAND1Q86VP6 1230 aaKnown RBP20.87■□□□□ 0.93
SPG7-202ENST00000341316 PLAC1Q9HBJ0 212 aa20.87■□□□□ 0.93
SPG7-202ENST00000341316 STARD13Q9Y3M8 1113 aa20.87■□□□□ 0.93
SPG7-202ENST00000341316 MFHAS1Q9Y4C4 1052 aa20.87■□□□□ 0.93
SPG7-202ENST00000341316 BRCA2P51587 3418 aa20.86■□□□□ 0.93
SPG7-202ENST00000341316 HAS3O00219 553 aa20.86■□□□□ 0.93
SPG7-202ENST00000341316 ADRA1DP25100 572 aa20.86■□□□□ 0.93
SPG7-202ENST00000341316 YWHAGP61981 247 aaKnown RBP eCLIP20.86■□□□□ 0.933e-6■■■□□ 16.4
SPG7-202ENST00000341316 CRYMQ14894 314 aa20.86■□□□□ 0.93
SPG7-202ENST00000341316 PCBP1Q15365 356 aaKnown RBP eCLIP20.86■□□□□ 0.93
SPG7-202ENST00000341316 LIMS2Q7Z4I7 341 aa20.86■□□□□ 0.93
SPG7-202ENST00000341316 OSTM1Q86WC4 334 aa20.86■□□□□ 0.93
SPG7-202ENST00000341316 VSIG1Q86XK7 387 aa20.86■□□□□ 0.93
SPG7-202ENST00000341316 SMG8Q8ND04 991 aaKnown RBP20.86■□□□□ 0.93
SPG7-202ENST00000341316 ERP27Q96DN0 273 aa20.86■□□□□ 0.93
SPG7-202ENST00000341316 KCTD15Q96SI1 283 aaPredicted RBP20.86■□□□□ 0.93
SPG7-202ENST00000341316 CYTH2Q99418 400 aa20.86■□□□□ 0.93
SPG7-202ENST00000341316 SNX25Q9H3E2 840 aa20.86■□□□□ 0.93
SPG7-202ENST00000341316 SSU72Q9NP77 194 aaKnown RBP20.86■□□□□ 0.93
SPG7-202ENST00000341316 ETNK2Q9NVF9 386 aa20.86■□□□□ 0.93
SPG7-202ENST00000341316 AP4E1Q9UPM8 1137 aa20.86■□□□□ 0.93
SPG7-202ENST00000341316 C1QAP02745 245 aa20.85■□□□□ 0.93
SPG7-202ENST00000341316 KCNE1P15382 129 aa20.85■□□□□ 0.93
SPG7-202ENST00000341316 AXLP30530 894 aa20.85■□□□□ 0.93
SPG7-202ENST00000341316 PYROXD2Q8N2H3 581 aa20.85■□□□□ 0.93
SPG7-202ENST00000341316 BANPQ8N9N5 519 aa20.85■□□□□ 0.93
SPG7-202ENST00000341316 UTP4Q969X6 686 aaKnown RBP20.85■□□□□ 0.93
SPG7-202ENST00000341316 TXLNGQ9NUQ3 528 aa20.85■□□□□ 0.93
SPG7-202ENST00000341316 SLC17A7Q9P2U7 560 aa20.85■□□□□ 0.93
SPG7-202ENST00000341316 IPPQ9Y573 584 aa20.85■□□□□ 0.93
SPG7-202ENST00000341316 NR2E3Q9Y5X4 410 aa20.85■□□□□ 0.93
SPG7-202ENST00000341316 METTL18O95568 372 aa20.85■□□□□ 0.93
SPG7-202ENST00000341316 SNX16P57768 344 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms