RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 MAP7D3Q8IWC1 876 aa16.07■□□□□ 0.16
MBD1-203ENST00000339998 BBOF1Q8ND07 529 aa16.07■□□□□ 0.16
MBD1-203ENST00000339998 HSFY1Q96LI6 401 aa16.07■□□□□ 0.16
MBD1-203ENST00000339998 PRMT1Q99873 361 aaKnown RBP16.07■□□□□ 0.16
MBD1-203ENST00000339998 FAM124BQ9H5Z6 455 aaPredicted RBP16.07■□□□□ 0.16
MBD1-203ENST00000339998 KCNK9Q9NPC2 374 aa16.07■□□□□ 0.16
MBD1-203ENST00000339998 PIH1D1Q9NWS0 290 aaKnown RBP16.07■□□□□ 0.16
MBD1-203ENST00000339998 SRRDQ9UH36 339 aa16.07■□□□□ 0.16
MBD1-203ENST00000339998 A0A0U1RQF3 1178 aa16.07■□□□□ 0.16
MBD1-203ENST00000339998 FAM72CH0Y354 149 aa16.07■□□□□ 0.16
MBD1-203ENST00000339998 MATKP42679 507 aa16.07■□□□□ 0.16
MBD1-203ENST00000339998 FAM72AQ5TYM5 149 aa16.07■□□□□ 0.16
MBD1-203ENST00000339998 FAM72DQ6L9T8 149 aa16.07■□□□□ 0.16
MBD1-203ENST00000339998 FAM72BQ86X60 149 aa16.07■□□□□ 0.16
MBD1-203ENST00000339998 AGGF1Q8N302 714 aaeCLIP16.07■□□□□ 0.16
MBD1-203ENST00000339998 ARFGAP2Q8N6H7 521 aa16.07■□□□□ 0.16
MBD1-203ENST00000339998 OR10T2Q8NGX3 314 aa16.07■□□□□ 0.16
MBD1-203ENST00000339998 RAET1EQ8TD07 263 aa16.07■□□□□ 0.16
MBD1-203ENST00000339998 CENPIQ92674 756 aaPredicted RBP16.07■□□□□ 0.16
MBD1-203ENST00000339998 CSPG4P5Q96PW8 444 aa16.07■□□□□ 0.16
MBD1-203ENST00000339998 RAB6BQ9NRW1 208 aa16.07■□□□□ 0.16
MBD1-203ENST00000339998 SLC38A7Q9NVC3 462 aa16.07■□□□□ 0.16
MBD1-203ENST00000339998 HCSTQ9UBK5 93 aa16.07■□□□□ 0.16
MBD1-203ENST00000339998 DDX20Q9UHI6 824 aaKnown RBP16.07■□□□□ 0.16
MBD1-203ENST00000339998 CHMP2BQ9UQN3 213 aa16.07■□□□□ 0.16
MBD1-203ENST00000339998 CLUHO75153 1309 aa16.07■□□□□ 0.16
MBD1-203ENST00000339998 PTPN9P43378 593 aa16.06■□□□□ 0.16
MBD1-203ENST00000339998 RPL34P49207 117 aaKnown RBP16.06■□□□□ 0.16
MBD1-203ENST00000339998 SMAD1Q15797 465 aaKnown RBP16.06■□□□□ 0.16
MBD1-203ENST00000339998 TRIM71Q2Q1W2 868 aaKnown RBP16.06■□□□□ 0.16
MBD1-203ENST00000339998 SLC7A14Q8TBB6 771 aa16.06■□□□□ 0.16
MBD1-203ENST00000339998 ZNF473Q8WTR7 871 aaKnown RBP16.06■□□□□ 0.16
MBD1-203ENST00000339998 LGMNQ99538 433 aa16.06■□□□□ 0.16
MBD1-203ENST00000339998 UBN1Q9NPG3 1134 aa16.06■□□□□ 0.16
MBD1-203ENST00000339998 CHST12Q9NRB3 414 aa16.06■□□□□ 0.16
MBD1-203ENST00000339998 CREBZFQ9NS37 354 aa16.06■□□□□ 0.16
MBD1-203ENST00000339998 NUDT5Q9UKK9 219 aa16.06■□□□□ 0.16
MBD1-203ENST00000339998 GIT1Q9Y2X7 761 aa16.06■□□□□ 0.16
MBD1-203ENST00000339998 EXOC1LA0A1B0GW35 172 aa16.06■□□□□ 0.16
MBD1-203ENST00000339998 AGTP01019 485 aa16.06■□□□□ 0.16
MBD1-203ENST00000339998 PGFP49763 221 aa16.06■□□□□ 0.16
MBD1-203ENST00000339998 DSC3Q14574 896 aa16.06■□□□□ 0.16
MBD1-203ENST00000339998 TNFAIP8L3Q5GJ75 292 aa16.06■□□□□ 0.16
MBD1-203ENST00000339998 PPIL6Q8IXY8 311 aa16.06■□□□□ 0.16
MBD1-203ENST00000339998 FBXO36Q8NEA4 188 aa16.06■□□□□ 0.16
MBD1-203ENST00000339998 SCAMP5Q8TAC9 235 aa16.06■□□□□ 0.16
MBD1-203ENST00000339998 MYLPFQ96A32 169 aa16.06■□□□□ 0.16
MBD1-203ENST00000339998 SPAG7O75391 227 aa16.05■□□□□ 0.16
MBD1-203ENST00000339998 CKBP12277 381 aa16.05■□□□□ 0.16
MBD1-203ENST00000339998 GRIA1P42261 906 aa16.05■□□□□ 0.16
MBD1-203ENST00000339998 TFDP2Q14188 446 aa16.05■□□□□ 0.16
MBD1-203ENST00000339998 KCNT2Q6UVM3 1135 aa16.05■□□□□ 0.16
MBD1-203ENST00000339998 VSTM1Q6UX27 236 aa16.05■□□□□ 0.16
MBD1-203ENST00000339998 TAX1BP1Q86VP1 789 aa16.05■□□□□ 0.16
MBD1-203ENST00000339998 ZDHHC17Q8IUH5 632 aa16.05■□□□□ 0.16
MBD1-203ENST00000339998 GDAP1Q8TB36 358 aa16.05■□□□□ 0.16
MBD1-203ENST00000339998 TMEM109Q9BVC6 243 aa16.05■□□□□ 0.16
MBD1-203ENST00000339998 FAM129AQ9BZQ8 928 aa16.05■□□□□ 0.16
MBD1-203ENST00000339998 TDRD15B5MCY1 1934 aaKnown RBP16.05■□□□□ 0.16
MBD1-203ENST00000339998 TMEM120BA0PK00 339 aa16.05■□□□□ 0.16
MBD1-203ENST00000339998 MDM4O15151 490 aa16.05■□□□□ 0.16
MBD1-203ENST00000339998 DDHD2O94830 711 aa16.05■□□□□ 0.16
MBD1-203ENST00000339998 ZBED1O96006 694 aa16.05■□□□□ 0.16
MBD1-203ENST00000339998 ALDH1A1P00352 501 aa16.05■□□□□ 0.16
MBD1-203ENST00000339998 NCAM1P13591 858 aa16.05■□□□□ 0.16
MBD1-203ENST00000339998 PDK2Q15119 407 aa16.05■□□□□ 0.16
MBD1-203ENST00000339998 SLC9A4Q6AI14 798 aa16.05■□□□□ 0.16
MBD1-203ENST00000339998 MRPL10Q7Z7H8 261 aaKnown RBP16.05■□□□□ 0.16
MBD1-203ENST00000339998 FAF2Q96CS3 445 aa16.05■□□□□ 0.16
MBD1-203ENST00000339998 B3GALT6Q96L58 329 aa16.05■□□□□ 0.16
MBD1-203ENST00000339998 PRG3Q9Y2Y8 225 aaPredicted RBP16.05■□□□□ 0.16
MBD1-203ENST00000339998 CAPN9O14815 690 aa16.05■□□□□ 0.16
MBD1-203ENST00000339998 TRAPPC3O43617 180 aa16.05■□□□□ 0.16
MBD1-203ENST00000339998 METTL18O95568 372 aa16.05■□□□□ 0.16
MBD1-203ENST00000339998 ACADSBP45954 432 aa16.05■□□□□ 0.16
MBD1-203ENST00000339998 SLC8A3P57103 927 aa16.05■□□□□ 0.16
MBD1-203ENST00000339998 DPYSL2Q16555 572 aa16.05■□□□□ 0.16
MBD1-203ENST00000339998 SLC25A52Q3SY17 297 aa16.05■□□□□ 0.16
MBD1-203ENST00000339998 EFHC1Q5JVL4 640 aa16.05■□□□□ 0.16
MBD1-203ENST00000339998 SDHAF4Q5VUM1 108 aa16.05■□□□□ 0.16
MBD1-203ENST00000339998 CENPUQ71F23 418 aa16.05■□□□□ 0.16
MBD1-203ENST00000339998 RNF180Q86T96 592 aa16.05■□□□□ 0.16
MBD1-203ENST00000339998 HACE1Q8IYU2 909 aa16.05■□□□□ 0.16
MBD1-203ENST00000339998 CCHCR1Q8TD31 782 aa16.05■□□□□ 0.16
MBD1-203ENST00000339998 ATXN2LQ8WWM7 1075 aaKnown RBP16.05■□□□□ 0.16
MBD1-203ENST00000339998 LINC01599Q8WXQ3 324 aa16.05■□□□□ 0.16
MBD1-203ENST00000339998 XPO6Q96QU8 1125 aaKnown RBP16.05■□□□□ 0.16
MBD1-203ENST00000339998 ALOX15BO15296 676 aa16.04■□□□□ 0.16
MBD1-203ENST00000339998 IVLP07476 585 aa16.04■□□□□ 0.16
MBD1-203ENST00000339998 APRTP07741 180 aa16.04■□□□□ 0.16
MBD1-203ENST00000339998 C4orf33Q8N1A6 199 aa16.04■□□□□ 0.16
MBD1-203ENST00000339998 PYROXD1Q8WU10 500 aa16.04■□□□□ 0.16
MBD1-203ENST00000339998 TEKT4Q8WW24 435 aa16.04■□□□□ 0.16
MBD1-203ENST00000339998 PGLYRP2Q96PD5 576 aa16.04■□□□□ 0.16
MBD1-203ENST00000339998 INTS9Q9NV88 658 aaKnown RBP16.04■□□□□ 0.16
MBD1-203ENST00000339998 DTLQ9NZJ0 730 aa16.04■□□□□ 0.16
MBD1-203ENST00000339998 DNAJB4Q9UDY4 337 aa16.04■□□□□ 0.16
MBD1-203ENST00000339998 SHOC2Q9UQ13 582 aa16.04■□□□□ 0.16
MBD1-203ENST00000339998 GMNCA6NCL1 334 aa16.04■□□□□ 0.16
MBD1-203ENST00000339998 GATMP50440 423 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms