RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 RP1P56715 2156 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 SEC24AO95486 1093 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 NR6A1Q15406 480 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 RUNDC3AQ59EK9 446 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 PALB2Q86YC2 1186 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 CLHC1Q8NHS4 586 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 SUN5Q8TC36 379 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 C1QTNF1Q9BXJ1 281 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 STN1Q9H668 368 aaKnown RBP13.19□□□□□ -0.3
USP47-202ENST00000339865 ZNF302Q9NR11 478 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 WDR19Q8NEZ3 1342 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 PRKAB2O43741 272 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 NOS1APO75052 506 aaPredicted RBP13.19□□□□□ -0.3
USP47-202ENST00000339865 UBOX5O94941 541 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 PRKAR2AP13861 404 aaKnown RBP13.19□□□□□ -0.3
USP47-202ENST00000339865 GSTT1P30711 240 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 STIP1P31948 543 aaKnown RBP13.19□□□□□ -0.3
USP47-202ENST00000339865 CLK2P49760 499 aaKnown RBP13.19□□□□□ -0.3
USP47-202ENST00000339865 TXNRD1Q16881 649 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 ZNF512Q96ME7 567 aaPredicted RBP13.19□□□□□ -0.3
USP47-202ENST00000339865 UNKQ9C0B0 810 aaKnown RBP13.19□□□□□ -0.3
USP47-202ENST00000339865 ZMYM3Q14202 1370 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 C2orf81A6NN90 581 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 TADA2AO75478 443 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 ADD2P35612 726 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 CBX5P45973 191 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 RPS6KA3P51812 740 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 WDR72Q3MJ13 1102 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 EXOC3L1Q86VI1 746 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 PARP8Q8N3A8 854 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 PRKD2Q9BZL6 878 aa13.19□□□□□ -0.3
USP47-202ENST00000339865 TIMM50Q3ZCQ8 353 aa13.18□□□□□ -0.3
USP47-202ENST00000339865 REXO1L1PQ8IX06 675 aa13.18□□□□□ -0.3
USP47-202ENST00000339865 KLHL28Q9NXS3 571 aa13.18□□□□□ -0.3
USP47-202ENST00000339865 EGFRP00533 1210 aa13.18□□□□□ -0.3
USP47-202ENST00000339865 SULT1C3Q6IMI6 304 aa13.18□□□□□ -0.3
USP47-202ENST00000339865 TXNDC11Q6PKC3 985 aa13.18□□□□□ -0.3
USP47-202ENST00000339865 PMM1Q92871 262 aa13.18□□□□□ -0.3
USP47-202ENST00000339865 CHORDC1Q9UHD1 332 aaPredicted RBP13.18□□□□□ -0.3
USP47-202ENST00000339865 NUP50Q9UKX7 468 aa13.18□□□□□ -0.3
USP47-202ENST00000339865 CCDC154A6NI56 674 aa13.18□□□□□ -0.3
USP47-202ENST00000339865 SFNP31947 248 aa13.18□□□□□ -0.3
USP47-202ENST00000339865 PDK1Q15118 436 aa13.18□□□□□ -0.3
USP47-202ENST00000339865 TTC23Q5W5X9 447 aa13.18□□□□□ -0.3
USP47-202ENST00000339865 ENGASEQ8NFI3 743 aa13.18□□□□□ -0.3
USP47-202ENST00000339865 EPS8L3Q8TE67 593 aaKnown RBP13.18□□□□□ -0.3
USP47-202ENST00000339865 NSMCE2Q96MF7 247 aa13.18□□□□□ -0.3
USP47-202ENST00000339865 OSBPL11Q9BXB4 747 aa13.18□□□□□ -0.3
USP47-202ENST00000339865 TEX46H3BTG2 121 aa13.18□□□□□ -0.3
USP47-202ENST00000339865 VPS26AO75436 327 aa13.18□□□□□ -0.3
USP47-202ENST00000339865 AP1S1P61966 158 aa13.18□□□□□ -0.3
USP47-202ENST00000339865 ZNF615Q8N8J6 731 aa13.18□□□□□ -0.3
USP47-202ENST00000339865 SPIRE2Q8WWL2 714 aa13.18□□□□□ -0.3
USP47-202ENST00000339865 MTG1Q9BT17 334 aaPredicted RBP13.18□□□□□ -0.3
USP47-202ENST00000339865 AKAP7Q9P0M2 348 aaPredicted RBP13.18□□□□□ -0.3
USP47-202ENST00000339865 SNRNP48Q6IEG0 339 aaKnown RBP13.18□□□□□ -0.3
USP47-202ENST00000339865 PACS1Q6VY07 963 aa13.18□□□□□ -0.3
USP47-202ENST00000339865 FAM20CQ8IXL6 584 aa13.18□□□□□ -0.3
USP47-202ENST00000339865 PPIL6Q8IXY8 311 aa13.18□□□□□ -0.3
USP47-202ENST00000339865 ALKBH4Q9NXW9 302 aa13.18□□□□□ -0.3
USP47-202ENST00000339865 EMC3Q9P0I2 261 aa13.18□□□□□ -0.3
USP47-202ENST00000339865 GABBR1Q9UBS5 961 aa13.18□□□□□ -0.3
USP47-202ENST00000339865 RPH3AQ9Y2J0 694 aaPredicted RBP13.18□□□□□ -0.3
USP47-202ENST00000339865 RPAP1Q9BWH6 1393 aaPredicted RBP13.18□□□□□ -0.3
USP47-202ENST00000339865 PTGS2P35354 604 aa13.18□□□□□ -0.3
USP47-202ENST00000339865 GALCP54803 685 aa13.18□□□□□ -0.3
USP47-202ENST00000339865 C4orf46Q504U0 113 aa13.18□□□□□ -0.3
USP47-202ENST00000339865 FRMD5Q7Z6J6 570 aa13.18□□□□□ -0.3
USP47-202ENST00000339865 FAM9CQ8IZT9 166 aa13.18□□□□□ -0.3
USP47-202ENST00000339865 EEF1AKMT1Q8WVE0 214 aa13.18□□□□□ -0.3
USP47-202ENST00000339865 TMEM120AQ9BXJ8 343 aa13.18□□□□□ -0.3
USP47-202ENST00000339865 SEMA6AQ9H2E6 1030 aa13.18□□□□□ -0.3
USP47-202ENST00000339865 SH3BP1Q9Y3L3 701 aa13.18□□□□□ -0.3
USP47-202ENST00000339865 MROH7Q68CQ1 1323 aa13.18□□□□□ -0.3
USP47-202ENST00000339865 MT-CO1P00395 513 aa13.17□□□□□ -0.3
USP47-202ENST00000339865 GSTM5P46439 218 aa13.17□□□□□ -0.3
USP47-202ENST00000339865 LINC00523Q86TU6 105 aa13.17□□□□□ -0.3
USP47-202ENST00000339865 AKAP14Q86UN6 197 aa13.17□□□□□ -0.3
USP47-202ENST00000339865 JAMLQ86YT9 394 aa13.17□□□□□ -0.3
USP47-202ENST00000339865 CENPSQ8N2Z9 138 aa13.17□□□□□ -0.3
USP47-202ENST00000339865 MEIOBQ8N635 442 aa13.17□□□□□ -0.3
USP47-202ENST00000339865 SSH3Q8TE77 659 aa13.17□□□□□ -0.3
USP47-202ENST00000339865 TAGLN3Q9UI15 199 aa13.17□□□□□ -0.3
USP47-202ENST00000339865 FOXN3O00409 490 aaPredicted RBP13.17□□□□□ -0.3
USP47-202ENST00000339865 KYQ8NBH2 561 aa13.17□□□□□ -0.3
USP47-202ENST00000339865 SETD9Q8NE22 299 aa13.17□□□□□ -0.3
USP47-202ENST00000339865 TSPAN14Q8NG11 270 aa13.17□□□□□ -0.3
USP47-202ENST00000339865 TMEM237Q96Q45 408 aa13.17□□□□□ -0.3
USP47-202ENST00000339865 PRKAR1AP10644 381 aa13.17□□□□□ -0.3
USP47-202ENST00000339865 C5orf22Q49AR2 442 aa13.17□□□□□ -0.3
USP47-202ENST00000339865 ZBTB46Q86UZ6 589 aa13.17□□□□□ -0.3
USP47-202ENST00000339865 CLYBLQ8N0X4 340 aa13.17□□□□□ -0.3
USP47-202ENST00000339865 FAM167AQ96KS9 214 aa13.17□□□□□ -0.3
USP47-202ENST00000339865 ATPIF1Q9UII2 106 aa13.17□□□□□ -0.3
USP47-202ENST00000339865 ZNF112Q9UJU3 913 aa13.17□□□□□ -0.3
USP47-202ENST00000339865 MAPK1P28482 360 aa13.17□□□□□ -0.3
USP47-202ENST00000339865 FAPQ12884 760 aa13.17□□□□□ -0.3
USP47-202ENST00000339865 UBE2Q1Q7Z7E8 422 aa13.17□□□□□ -0.3
USP47-202ENST00000339865 GIPC3Q8TF64 312 aa13.17□□□□□ -0.3
USP47-202ENST00000339865 LXNQ9BS40 222 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms