RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 CTNNAL1Q9UBT7 734 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 CDY2AQ9Y6F7 541 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 ZBBXA8MT70 800 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 GLRA3O75311 464 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 PGM1P36871 562 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 RAD23BP54727 409 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 ADIGQ0VDE8 80 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 CTXN3Q4LDR2 81 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 ZCCHC9Q8N567 271 aaKnown RBP6.5□□□□□ -1.37
PRKDC-202ENST00000338368 ALLCQ8N6M5 410 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 ARRDC4Q8NCT1 418 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 POPDC2Q9HBU9 364 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 MTO1Q9Y2Z2 717 aaKnown RBP6.5□□□□□ -1.37
PRKDC-202ENST00000338368 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.5□□□□□ -1.37
PRKDC-202ENST00000338368 NCAM2O15394 837 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 TSPAN1O60635 241 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 VEPH1Q14D04 833 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 SLC40A1Q9NP59 571 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 RBM22Q9NW64 420 aaKnown RBP eCLIP6.5□□□□□ -1.372e-6■■■■■ 26.9
PRKDC-202ENST00000338368 CNTNAP2Q9UHC6 1331 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 SDR42E2A6NKP2 422 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 LTFP02788 710 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 S100BP04271 92 aaPredicted RBP6.5□□□□□ -1.37
PRKDC-202ENST00000338368 NUDT18Q6ZVK8 323 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 APBA2Q99767 749 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 MRPL45Q9BRJ2 306 aaKnown RBP6.5□□□□□ -1.37
PRKDC-202ENST00000338368 B3GNT5Q9BYG0 378 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 SLC39A10Q9ULF5 831 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 R3HDM2Q9Y2K5 976 aaKnown RBP6.5□□□□□ -1.37
PRKDC-202ENST00000338368 PMPCBO75439 489 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 TOMM70O94826 608 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 LMNAP02545 664 aaKnown RBP6.5□□□□□ -1.37
PRKDC-202ENST00000338368 CHI3L2Q15782 390 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 CPNE8Q86YQ8 564 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 CALML6Q8TD86 181 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 WNT8BQ93098 351 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 SH3GL2Q99962 352 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 ST3GAL5Q9UNP4 418 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 RGPD8O14715 1765 aaPredicted RBP6.5□□□□□ -1.37
PRKDC-202ENST00000338368 TM9SF1O15321 606 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 LUC7L3O95232 432 aaKnown RBP6.5□□□□□ -1.37
PRKDC-202ENST00000338368 ZBTB48P10074 688 aaPredicted RBP6.5□□□□□ -1.37
PRKDC-202ENST00000338368 PYGBP11216 843 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 HARS2P49590 506 aaKnown RBP6.5□□□□□ -1.37
PRKDC-202ENST00000338368 KDSRQ06136 332 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 AGGF1Q8N302 714 aaeCLIP6.5□□□□□ -1.371e-6■■■■□ 21.7
PRKDC-202ENST00000338368 PPWD1Q96BP3 646 aaKnown RBP6.5□□□□□ -1.37
PRKDC-202ENST00000338368 PPP1R2P1Q96PQ5 205 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 GOLGA2P5Q9HBQ8 144 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 ETNK2Q9NVF9 386 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 SPEF2Q9C093 1822 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 SNX17Q15036 470 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 SH3TC2Q8TF17 1288 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 GCNAQ96QF7 691 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 FAM105AQ9NUU6 356 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 ARHGEF38Q9NXL2 777 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 BAZ2BQ9UIF8 2168 aaKnown RBP6.5□□□□□ -1.37
PRKDC-202ENST00000338368 UNGP13051 313 aaPredicted RBP6.5□□□□□ -1.37
PRKDC-202ENST00000338368 FSTL1Q12841 308 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 UNC45BQ8IWX7 931 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 MTBPQ96DY7 904 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 PDZD7Q9H5P4 517 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 UBP1Q9NZI7 540 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 CFHP08603 1231 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 ARHGAP1Q07960 439 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 LINC00523Q86TU6 105 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.49□□□□□ -1.37
PRKDC-202ENST00000338368 C18orf25Q96B23 403 aaPredicted RBP6.49□□□□□ -1.37
PRKDC-202ENST00000338368 ELOVL4Q9GZR5 314 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 KIF9Q9HAQ2 790 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 DMAP1Q9NPF5 467 aaPredicted RBP6.49□□□□□ -1.37
PRKDC-202ENST00000338368 CLGNO14967 610 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 NSUN2Q08J23 767 aaKnown RBP eCLIP6.49□□□□□ -1.37
PRKDC-202ENST00000338368 ITIH4Q14624 930 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 SLC10A6Q3KNW5 377 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 KIF2BQ8N4N8 673 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 B3GALNT2Q8NCR0 500 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 ELMO2Q96JJ3 720 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 DDX20Q9UHI6 824 aaKnown RBP6.49□□□□□ -1.37
PRKDC-202ENST00000338368 AAR2Q9Y312 384 aaKnown RBP6.49□□□□□ -1.37
PRKDC-202ENST00000338368 B2RBV5 119 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 ERBB2P04626 1255 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 CCR1P32246 355 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 MPP3Q13368 585 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 ART3Q13508 389 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 KBTBD12Q3ZCT8 623 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 STKLD1Q8NE28 680 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 CENPTQ96BT3 561 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 PIH1D1Q9NWS0 290 aaKnown RBP6.49□□□□□ -1.37
PRKDC-202ENST00000338368 NSMCE4AQ9NXX6 385 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 DSEQ9UL01 958 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 ANKRD12Q6UB98 2062 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 ETFBP38117 255 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 RPL10AP62906 217 aaKnown RBP6.49□□□□□ -1.37
PRKDC-202ENST00000338368 PTP4A2Q12974 167 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 ANKRD20A8PQ5CZ79 823 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 ZC3H4Q9UPT8 1303 aaKnown RBP6.49□□□□□ -1.37
PRKDC-202ENST00000338368 ADRA1DP25100 572 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 GEMP55040 296 aa6.49□□□□□ -1.37
PRKDC-202ENST00000338368 RAD51Q06609 339 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms