RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 SLC2A13Q96QE2 648 aa16.08■□□□□ 0.16
SEC13-201ENST00000337354 KCNK12Q9HB15 430 aa16.08■□□□□ 0.16
SEC13-201ENST00000337354 RRN3Q9NYV6 651 aa16.08■□□□□ 0.16
SEC13-201ENST00000337354 TMEM59LQ9UK28 342 aa16.08■□□□□ 0.16
SEC13-201ENST00000337354 PTPRDP23468 1912 aa16.07■□□□□ 0.16
SEC13-201ENST00000337354 SIGLEC16A6NMB1 481 aa16.07■□□□□ 0.16
SEC13-201ENST00000337354 KRT3P12035 628 aa16.07■□□□□ 0.16
SEC13-201ENST00000337354 FCARP24071 287 aa16.07■□□□□ 0.16
SEC13-201ENST00000337354 MATKP42679 507 aa16.07■□□□□ 0.16
SEC13-201ENST00000337354 GFPT1Q06210 699 aaPredicted RBP16.07■□□□□ 0.16
SEC13-201ENST00000337354 HTR4Q13639 388 aa16.07■□□□□ 0.16
SEC13-201ENST00000337354 TAF5Q15542 800 aa16.07■□□□□ 0.16
SEC13-201ENST00000337354 C2CD6Q53TS8 623 aa16.07■□□□□ 0.16
SEC13-201ENST00000337354 C10orf76Q5T2E6 689 aa16.07■□□□□ 0.16
SEC13-201ENST00000337354 TANGO2Q6ICL3 276 aa16.07■□□□□ 0.16
SEC13-201ENST00000337354 MSANTD2Q6P1R3 559 aa16.07■□□□□ 0.16
SEC13-201ENST00000337354 MFSD6LQ8IWD5 586 aa16.07■□□□□ 0.16
SEC13-201ENST00000337354 DEPDC1BQ8WUY9 529 aa16.07■□□□□ 0.16
SEC13-201ENST00000337354 FGF14Q92915 247 aa16.07■□□□□ 0.16
SEC13-201ENST00000337354 PIWIL1Q96J94 861 aaKnown RBP16.07■□□□□ 0.16
SEC13-201ENST00000337354 BAG1Q99933 345 aaPredicted RBP16.07■□□□□ 0.16
SEC13-201ENST00000337354 SELENOOQ9BVL4 669 aa16.07■□□□□ 0.16
SEC13-201ENST00000337354 KLF16Q9BXK1 252 aaPredicted RBP16.07■□□□□ 0.16
SEC13-201ENST00000337354 PARVAQ9NVD7 372 aa16.07■□□□□ 0.16
SEC13-201ENST00000337354 THG1LQ9NWX6 298 aaKnown RBP16.07■□□□□ 0.16
SEC13-201ENST00000337354 MARCH2Q9P0N8 246 aa16.07■□□□□ 0.16
SEC13-201ENST00000337354 NENFQ9UMX5 172 aa16.07■□□□□ 0.16
SEC13-201ENST00000337354 NAALADL1Q9UQQ1 740 aa16.07■□□□□ 0.16
SEC13-201ENST00000337354 CPQQ9Y646 472 aa16.07■□□□□ 0.16
SEC13-201ENST00000337354 NUMBLQ9Y6R0 609 aa16.07■□□□□ 0.16
SEC13-201ENST00000337354 DOCK6Q96HP0 2047 aa16.06■□□□□ 0.16
SEC13-201ENST00000337354 ANKRD62A6NC57 917 aa16.06■□□□□ 0.16
SEC13-201ENST00000337354 HEPACAM2A8MVW5 462 aa16.06■□□□□ 0.16
SEC13-201ENST00000337354 GOLGA8SH3BPF8 625 aa16.06■□□□□ 0.16
SEC13-201ENST00000337354 DAB1O75553 588 aa16.06■□□□□ 0.16
SEC13-201ENST00000337354 PSMC3P17980 439 aa16.06■□□□□ 0.16
SEC13-201ENST00000337354 CYLC1P35663 651 aaPredicted RBP16.06■□□□□ 0.16
SEC13-201ENST00000337354 VIPR2P41587 438 aa16.06■□□□□ 0.16
SEC13-201ENST00000337354 EFEMP1Q12805 493 aa16.06■□□□□ 0.16
SEC13-201ENST00000337354 NNTQ13423 1086 aa16.06■□□□□ 0.16
SEC13-201ENST00000337354 DCAF6Q58WW2 860 aa16.06■□□□□ 0.16
SEC13-201ENST00000337354 DEFB106AQ8N104 65 aa16.06■□□□□ 0.16
SEC13-201ENST00000337354 BPIFB1Q8TDL5 484 aa16.06■□□□□ 0.16
SEC13-201ENST00000337354 MRPL47Q9HD33 250 aaKnown RBP16.06■□□□□ 0.16
SEC13-201ENST00000337354 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.06■□□□□ 0.16
SEC13-201ENST00000337354 NUDT5Q9UKK9 219 aa16.06■□□□□ 0.16
SEC13-201ENST00000337354 STAP1Q9ULZ2 295 aa16.06■□□□□ 0.16
SEC13-201ENST00000337354 HBS1LQ9Y450 684 aaKnown RBP16.06■□□□□ 0.16
SEC13-201ENST00000337354 TCRBV5S1A1TA0A578 114 aa16.05■□□□□ 0.16
SEC13-201ENST00000337354 LEFTY2O00292 366 aa16.05■□□□□ 0.16
SEC13-201ENST00000337354 PRAMEF12O95522 483 aa16.05■□□□□ 0.16
SEC13-201ENST00000337354 RRM1P23921 792 aa16.05■□□□□ 0.16
SEC13-201ENST00000337354 GBP1P32455 592 aa16.05■□□□□ 0.16
SEC13-201ENST00000337354 RNASE9P60153 205 aaKnown RBP16.05■□□□□ 0.16
SEC13-201ENST00000337354 GPC5P78333 572 aa16.05■□□□□ 0.16
SEC13-201ENST00000337354 FCHO2Q0JRZ9 810 aa16.05■□□□□ 0.16
SEC13-201ENST00000337354 SYPL2Q5VXT5 272 aa16.05■□□□□ 0.16
SEC13-201ENST00000337354 PLEKHA7Q6IQ23 1121 aa16.05■□□□□ 0.16
SEC13-201ENST00000337354 DNAJC24Q6P3W2 148 aa16.05■□□□□ 0.16
SEC13-201ENST00000337354 SLC44A3Q8N4M1 653 aa16.05■□□□□ 0.16
SEC13-201ENST00000337354 SH3RF2Q8TEC5 729 aa16.05■□□□□ 0.16
SEC13-201ENST00000337354 ZFRQ96KR1 1074 aaKnown RBP16.05■□□□□ 0.16
SEC13-201ENST00000337354 SERPINB11Q96P15 392 aa16.05■□□□□ 0.16
SEC13-201ENST00000337354 DDX23Q9BUQ8 820 aaKnown RBP16.05■□□□□ 0.16
SEC13-201ENST00000337354 SMG9Q9H0W8 520 aaKnown RBP16.05■□□□□ 0.16
SEC13-201ENST00000337354 SMOC2Q9H3U7 446 aa16.05■□□□□ 0.16
SEC13-201ENST00000337354 LUC7LQ9NQ29 371 aaKnown RBP16.05■□□□□ 0.16
SEC13-201ENST00000337354 SMPD4Q9NXE4 827 aa16.05■□□□□ 0.16
SEC13-201ENST00000337354 CNOT8Q9UFF9 292 aaKnown RBP16.05■□□□□ 0.16
SEC13-201ENST00000337354 RASAL2Q9UJF2 1139 aa16.05■□□□□ 0.16
SEC13-201ENST00000337354 CCL26Q9Y258 94 aa16.05■□□□□ 0.16
SEC13-201ENST00000337354 SCINQ9Y6U3 715 aa16.05■□□□□ 0.16
SEC13-201ENST00000337354 E2F8A0AVK6 867 aa16.04■□□□□ 0.16
SEC13-201ENST00000337354 GRAP2O75791 330 aa16.04■□□□□ 0.16
SEC13-201ENST00000337354 LCA5LO95447 670 aa16.04■□□□□ 0.16
SEC13-201ENST00000337354 F9P00740 461 aa16.04■□□□□ 0.16
SEC13-201ENST00000337354 H2AFZP0C0S5 128 aa16.04■□□□□ 0.16
SEC13-201ENST00000337354 ZXDBP98169 803 aa16.04■□□□□ 0.16
SEC13-201ENST00000337354 MAMLD1Q13495 774 aa16.04■□□□□ 0.16
SEC13-201ENST00000337354 TDGQ13569 410 aa16.04■□□□□ 0.16
SEC13-201ENST00000337354 SPA17Q15506 151 aa16.04■□□□□ 0.16
SEC13-201ENST00000337354 ZNF77Q15935 545 aa16.04■□□□□ 0.16
SEC13-201ENST00000337354 SLC25A52Q3SY17 297 aa16.04■□□□□ 0.16
SEC13-201ENST00000337354 CC2D1AQ6P1N0 951 aaPredicted RBP16.04■□□□□ 0.16
SEC13-201ENST00000337354 VITQ6UXI7 678 aa16.04■□□□□ 0.16
SEC13-201ENST00000337354 HTR3DQ70Z44 454 aa16.04■□□□□ 0.16
SEC13-201ENST00000337354 H2AFVQ71UI9 128 aa16.04■□□□□ 0.16
SEC13-201ENST00000337354 MIB1Q86YT6 1006 aa16.04■□□□□ 0.16
SEC13-201ENST00000337354 YAF2Q8IY57 180 aa16.04■□□□□ 0.16
SEC13-201ENST00000337354 DQX1Q8TE96 717 aaKnown RBP16.04■□□□□ 0.16
SEC13-201ENST00000337354 NT5C3BQ969T7 300 aa16.04■□□□□ 0.16
SEC13-201ENST00000337354 PLD4Q96BZ4 506 aa16.04■□□□□ 0.16
SEC13-201ENST00000337354 TRMT61BQ9BVS5 477 aaKnown RBP16.04■□□□□ 0.16
SEC13-201ENST00000337354 DCLK3Q9C098 648 aa16.04■□□□□ 0.16
SEC13-201ENST00000337354 METTL5Q9NRN9 209 aaKnown RBP16.04■□□□□ 0.16
SEC13-201ENST00000337354 GKN1Q9NS71 199 aa16.04■□□□□ 0.16
SEC13-201ENST00000337354 SFMBT1Q9UHJ3 866 aa16.04■□□□□ 0.16
SEC13-201ENST00000337354 INTUQ9ULD6 942 aa16.04■□□□□ 0.16
SEC13-201ENST00000337354 TLR6Q9Y2C9 796 aa16.04■□□□□ 0.16
SEC13-201ENST00000337354 SH3BP1Q9Y3L3 701 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms