RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 CLUHO75153 1309 aa12.63□□□□□ -0.39
FN1-202ENST00000336916 CLK1P49759 484 aaKnown RBP12.63□□□□□ -0.39
FN1-202ENST00000336916 VSNL1P62760 191 aa12.63□□□□□ -0.39
FN1-202ENST00000336916 KPNB1Q14974 876 aaKnown RBP12.63□□□□□ -0.39
FN1-202ENST00000336916 CYP51A1Q16850 503 aa12.63□□□□□ -0.39
FN1-202ENST00000336916 DPP10Q8N608 796 aa12.63□□□□□ -0.39
FN1-202ENST00000336916 OSBPL6Q9BZF3 934 aa12.63□□□□□ -0.39
FN1-202ENST00000336916 TMEM39AQ9NV64 488 aa12.63□□□□□ -0.39
FN1-202ENST00000336916 ZBTB12Q9Y330 459 aaPredicted RBP12.63□□□□□ -0.39
FN1-202ENST00000336916 DUOX1Q9NRD9 1551 aa12.63□□□□□ -0.39
FN1-202ENST00000336916 IGSF6O95976 241 aa12.63□□□□□ -0.39
FN1-202ENST00000336916 MZF1P28698 734 aaPredicted RBP12.63□□□□□ -0.39
FN1-202ENST00000336916 BLOC1S5Q8TDH9 187 aa12.63□□□□□ -0.39
FN1-202ENST00000336916 RAD51BO15315 384 aa12.62□□□□□ -0.39
FN1-202ENST00000336916 CCT8P50990 548 aa12.62□□□□□ -0.39
FN1-202ENST00000336916 LAMTOR4Q0VGL1 99 aa12.62□□□□□ -0.39
FN1-202ENST00000336916 IKBKEQ14164 716 aa12.62□□□□□ -0.39
FN1-202ENST00000336916 TRIM71Q2Q1W2 868 aaKnown RBP12.62□□□□□ -0.39
FN1-202ENST00000336916 EFCAB1Q9HAE3 211 aa12.62□□□□□ -0.39
FN1-202ENST00000336916 PSME2Q9UL46 239 aa12.62□□□□□ -0.39
FN1-202ENST00000336916 CES2O00748 559 aa12.62□□□□□ -0.39
FN1-202ENST00000336916 MDH1P40925 334 aaKnown RBP12.62□□□□□ -0.39
FN1-202ENST00000336916 MRPS15P82914 257 aaKnown RBP12.62□□□□□ -0.39
FN1-202ENST00000336916 CCNG2Q16589 344 aa12.62□□□□□ -0.39
FN1-202ENST00000336916 OVOS1Q6IE37 1185 aa12.62□□□□□ -0.39
FN1-202ENST00000336916 TBC1D23Q9NUY8 699 aa12.62□□□□□ -0.39
FN1-202ENST00000336916 VANGL2Q9ULK5 521 aa12.62□□□□□ -0.39
FN1-202ENST00000336916 ZSCAN5CA6NGD5 496 aaPredicted RBP12.62□□□□□ -0.39
FN1-202ENST00000336916 PDE2AO00408 941 aaPredicted RBP12.62□□□□□ -0.39
FN1-202ENST00000336916 PMPCBO75439 489 aa12.62□□□□□ -0.39
FN1-202ENST00000336916 PAEPP09466 180 aa12.62□□□□□ -0.39
FN1-202ENST00000336916 ST13P50502 369 aaKnown RBP12.62□□□□□ -0.39
FN1-202ENST00000336916 ALG6Q9Y672 507 aa12.62□□□□□ -0.39
FN1-202ENST00000336916 MSH4O15457 936 aa12.62□□□□□ -0.39
FN1-202ENST00000336916 KRT6AP02538 564 aa12.62□□□□□ -0.39
FN1-202ENST00000336916 KRT6BP04259 564 aa12.62□□□□□ -0.39
FN1-202ENST00000336916 COMTP21964 271 aa12.62□□□□□ -0.39
FN1-202ENST00000336916 KRT6CP48668 564 aa12.62□□□□□ -0.39
FN1-202ENST00000336916 KLC1Q07866 573 aa12.62□□□□□ -0.39
FN1-202ENST00000336916 ATP6AP1LQ52LC2 224 aa12.62□□□□□ -0.39
FN1-202ENST00000336916 SEL1L3Q68CR1 1132 aa12.62□□□□□ -0.39
FN1-202ENST00000336916 C11orf63Q6NUN7 778 aa12.62□□□□□ -0.39
FN1-202ENST00000336916 TMEM199Q8N511 208 aa12.62□□□□□ -0.39
FN1-202ENST00000336916 DPF2Q92785 391 aa12.62□□□□□ -0.39
FN1-202ENST00000336916 ERI2A8K979 691 aaKnown RBP12.62□□□□□ -0.39
FN1-202ENST00000336916 PLA2G6O60733 806 aa12.62□□□□□ -0.39
FN1-202ENST00000336916 ENO1P06733 434 aaKnown RBP12.62□□□□□ -0.39
FN1-202ENST00000336916 ENO3P13929 434 aaPredicted RBP12.62□□□□□ -0.39
FN1-202ENST00000336916 PARP9Q8IXQ6 854 aa12.62□□□□□ -0.39
FN1-202ENST00000336916 FBXL16Q8N461 479 aa12.62□□□□□ -0.39
FN1-202ENST00000336916 ST13P5Q8NFI4 369 aaPredicted RBP12.62□□□□□ -0.39
FN1-202ENST00000336916 LOC102724159A0A0B4J2E5 919 aa12.62□□□□□ -0.39
FN1-202ENST00000336916 NPHP3-ACAD11A0A0J9YXS1 232 aa12.62□□□□□ -0.39
FN1-202ENST00000336916 PP2D1A8MPX8 630 aa12.62□□□□□ -0.39
FN1-202ENST00000336916 MYO1GB0I1T2 1018 aa12.62□□□□□ -0.39
FN1-202ENST00000336916 MAPK7Q13164 816 aa12.62□□□□□ -0.39
FN1-202ENST00000336916 PWP2Q15269 919 aaKnown RBP12.62□□□□□ -0.39
FN1-202ENST00000336916 ANKMY2Q8IV38 441 aa12.62□□□□□ -0.39
FN1-202ENST00000336916 CYGBQ8WWM9 190 aa12.62□□□□□ -0.39
FN1-202ENST00000336916 TMEM159Q96B96 161 aa12.62□□□□□ -0.39
FN1-202ENST00000336916 ANKRD27Q96NW4 1050 aa12.62□□□□□ -0.39
FN1-202ENST00000336916 CACNA2D2Q9NY47 1150 aa12.62□□□□□ -0.39
FN1-202ENST00000336916 SETD1AO15047 1707 aaKnown RBP12.62□□□□□ -0.39
FN1-202ENST00000336916 CES1P23141 567 aa12.62□□□□□ -0.39
FN1-202ENST00000336916 INSCQ1MX18 579 aa12.62□□□□□ -0.39
FN1-202ENST00000336916 ERMARDQ5T6L9 678 aa12.62□□□□□ -0.39
FN1-202ENST00000336916 MCOLN3Q8TDD5 553 aa12.62□□□□□ -0.39
FN1-202ENST00000336916 E2F7Q96AV8 911 aa12.62□□□□□ -0.39
FN1-202ENST00000336916 CNDP1Q96KN2 507 aa12.62□□□□□ -0.39
FN1-202ENST00000336916 DEPDC7Q96QD5 511 aa12.62□□□□□ -0.39
FN1-202ENST00000336916 RGPD1P0DJD0 1748 aa12.62□□□□□ -0.39
FN1-202ENST00000336916 ICE1Q9Y2F5 2266 aa12.61□□□□□ -0.39
FN1-202ENST00000336916 ADCY6O43306 1168 aa12.61□□□□□ -0.39
FN1-202ENST00000336916 RAMP2O60895 175 aa12.61□□□□□ -0.39
FN1-202ENST00000336916 TMC7Q7Z402 723 aa12.61□□□□□ -0.39
FN1-202ENST00000336916 COL23A1Q86Y22 540 aaPredicted RBP12.61□□□□□ -0.39
FN1-202ENST00000336916 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.61□□□□□ -0.398e-6■□□□□ 10.8
FN1-202ENST00000336916 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.61□□□□□ -0.39
FN1-202ENST00000336916 DYTNA2CJ06 578 aa12.61□□□□□ -0.39
FN1-202ENST00000336916 PAGE2BQ5JRK9 111 aa12.61□□□□□ -0.39
FN1-202ENST00000336916 PRPF39Q86UA1 669 aaKnown RBP12.61□□□□□ -0.39
FN1-202ENST00000336916 MOSPD2Q8NHP6 518 aa12.61□□□□□ -0.39
FN1-202ENST00000336916 SLIT3O75094 1523 aa12.61□□□□□ -0.39
FN1-202ENST00000336916 KNTC1P50748 2209 aa12.61□□□□□ -0.39
FN1-202ENST00000336916 RBAK-RBAKDNI3L0D1 243 aa12.61□□□□□ -0.39
FN1-202ENST00000336916 OR56A5P0C7T3 313 aa12.61□□□□□ -0.39
FN1-202ENST00000336916 NUP62P37198 522 aaPredicted RBP12.61□□□□□ -0.39
FN1-202ENST00000336916 HERVK_113P62684 666 aa12.61□□□□□ -0.39
FN1-202ENST00000336916 ZNF248Q8NDW4 579 aa12.61□□□□□ -0.39
FN1-202ENST00000336916 STMN3Q9NZ72 180 aa12.61□□□□□ -0.39
FN1-202ENST00000336916 THRAP10827 490 aa12.61□□□□□ -0.39
FN1-202ENST00000336916 PCSK2P16519 638 aa12.61□□□□□ -0.39
FN1-202ENST00000336916 ZNF7P17097 686 aaPredicted RBP12.61□□□□□ -0.39
FN1-202ENST00000336916 SLC27A1Q6PCB7 646 aa12.61□□□□□ -0.39
FN1-202ENST00000336916 C2orf49Q9BVC5 232 aaPredicted RBP12.61□□□□□ -0.39
FN1-202ENST00000336916 MAP1BP46821 2468 aaKnown RBP12.61□□□□□ -0.39
FN1-202ENST00000336916 CXCR2P25025 360 aa12.61□□□□□ -0.39
FN1-202ENST00000336916 GRIK4Q16099 956 aa12.61□□□□□ -0.39
FN1-202ENST00000336916 BHLHB9Q6PI77 547 aa12.61□□□□□ -0.39
FN1-202ENST00000336916 TRPM8Q7Z2W7 1104 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms