RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 SLC26A7Q8TE54 656 aa12.25□□□□□ -0.45
HDAC6-201ENST00000334136 HSPH1Q92598 858 aa12.25□□□□□ -0.45
HDAC6-201ENST00000334136 KRT82Q9NSB4 513 aa12.25□□□□□ -0.45
HDAC6-201ENST00000334136 DPP7Q9UHL4 492 aa12.25□□□□□ -0.45
HDAC6-201ENST00000334136 FIS1Q9Y3D6 152 aa12.25□□□□□ -0.45
HDAC6-201ENST00000334136 FOCADQ5VW36 1801 aa12.25□□□□□ -0.45
HDAC6-201ENST00000334136 PPFIA2O75334 1257 aa12.25□□□□□ -0.45
HDAC6-201ENST00000334136 PDGFRAP16234 1089 aa12.25□□□□□ -0.45
HDAC6-201ENST00000334136 MX2P20592 715 aa12.25□□□□□ -0.45
HDAC6-201ENST00000334136 STAT4Q14765 748 aa12.25□□□□□ -0.45
HDAC6-201ENST00000334136 PPP6R3Q5H9R7 873 aaPredicted RBP12.25□□□□□ -0.45
HDAC6-201ENST00000334136 CRLF3Q8IUI8 442 aa12.25□□□□□ -0.45
HDAC6-201ENST00000334136 PRCCQ92733 491 aaPredicted RBP12.25□□□□□ -0.45
HDAC6-201ENST00000334136 BADQ92934 168 aa12.25□□□□□ -0.45
HDAC6-201ENST00000334136 TOX2Q96NM4 488 aa12.25□□□□□ -0.45
HDAC6-201ENST00000334136 CENPKQ9BS16 269 aa12.25□□□□□ -0.45
HDAC6-201ENST00000334136 ANLNQ9NQW6 1124 aa12.25□□□□□ -0.45
HDAC6-201ENST00000334136 NVLO15381 856 aaKnown RBP12.24□□□□□ -0.45
HDAC6-201ENST00000334136 MAP3K7CLP57077 242 aa12.24□□□□□ -0.45
HDAC6-201ENST00000334136 NR1H3Q13133 447 aa12.24□□□□□ -0.45
HDAC6-201ENST00000334136 HSP90AA5PQ58FG0 334 aa12.24□□□□□ -0.45
HDAC6-201ENST00000334136 RABGAP1LQ5R372 815 aa12.24□□□□□ -0.45
HDAC6-201ENST00000334136 SLC39A4Q6P5W5 647 aa12.24□□□□□ -0.45
HDAC6-201ENST00000334136 ANKS3Q6ZW76 656 aa12.24□□□□□ -0.45
HDAC6-201ENST00000334136 UNC93AQ86WB7 457 aa12.24□□□□□ -0.45
HDAC6-201ENST00000334136 ACTRT1Q8TDG2 376 aa12.24□□□□□ -0.45
HDAC6-201ENST00000334136 TMEM40Q8WWA1 233 aa12.24□□□□□ -0.45
HDAC6-201ENST00000334136 TRAIPQ9BWF2 469 aa12.24□□□□□ -0.45
HDAC6-201ENST00000334136 SIK3Q9Y2K2 1263 aa12.24□□□□□ -0.45
HDAC6-201ENST00000334136 MCM3APO60318 1980 aa12.24□□□□□ -0.45
HDAC6-201ENST00000334136 F5H423 210 aaPredicted RBP12.24□□□□□ -0.45
HDAC6-201ENST00000334136 ENPP3O14638 875 aa12.24□□□□□ -0.45
HDAC6-201ENST00000334136 FANCGO15287 622 aa12.24□□□□□ -0.45
HDAC6-201ENST00000334136 KRT37O76014 449 aa12.24□□□□□ -0.45
HDAC6-201ENST00000334136 MOCS2O96007 188 aaPredicted RBP12.24□□□□□ -0.45
HDAC6-201ENST00000334136 C4BPAP04003 597 aaKnown RBP12.24□□□□□ -0.45
HDAC6-201ENST00000334136 ENO1P06733 434 aaKnown RBP12.24□□□□□ -0.45
HDAC6-201ENST00000334136 UBTFL6P0CB48 400 aaPredicted RBP12.24□□□□□ -0.45
HDAC6-201ENST00000334136 IGFBP4P22692 258 aa12.24□□□□□ -0.45
HDAC6-201ENST00000334136 CLCNKBP51801 687 aa12.24□□□□□ -0.45
HDAC6-201ENST00000334136 TAP1Q03518 808 aa12.24□□□□□ -0.45
HDAC6-201ENST00000334136 SLC39A12Q504Y0 691 aa12.24□□□□□ -0.45
HDAC6-201ENST00000334136 LHX8Q68G74 356 aa12.24□□□□□ -0.45
HDAC6-201ENST00000334136 PALB2Q86YC2 1186 aa12.24□□□□□ -0.45
HDAC6-201ENST00000334136 RNF168Q8IYW5 571 aaPredicted RBP12.24□□□□□ -0.45
HDAC6-201ENST00000334136 ERVK-5Q9HDB9 667 aa12.24□□□□□ -0.45
HDAC6-201ENST00000334136 GDF3Q9NR23 364 aa12.24□□□□□ -0.45
HDAC6-201ENST00000334136 NDE1Q9NXR1 346 aa12.24□□□□□ -0.45
HDAC6-201ENST00000334136 IP6K2Q9UHH9 426 aa12.24□□□□□ -0.45
HDAC6-201ENST00000334136 TSPAN16Q9UKR8 245 aa12.24□□□□□ -0.45
HDAC6-201ENST00000334136 HEY1Q9Y5J3 304 aa12.24□□□□□ -0.45
HDAC6-201ENST00000334136 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.24□□□□□ -0.45
HDAC6-201ENST00000334136 COILP38432 576 aaPredicted RBP12.24□□□□□ -0.45
HDAC6-201ENST00000334136 SERPINB4P48594 390 aa12.24□□□□□ -0.45
HDAC6-201ENST00000334136 POU5F1Q01860 360 aaKnown RBP12.24□□□□□ -0.45
HDAC6-201ENST00000334136 MMEL1Q495T6 779 aa12.24□□□□□ -0.45
HDAC6-201ENST00000334136 EFHC1Q5JVL4 640 aa12.24□□□□□ -0.45
HDAC6-201ENST00000334136 TAS1R3Q7RTX0 852 aa12.24□□□□□ -0.45
HDAC6-201ENST00000334136 IFNLR1Q8IU57 520 aaPredicted RBP12.24□□□□□ -0.45
HDAC6-201ENST00000334136 SLC2A14Q8TDB8 520 aa12.24□□□□□ -0.45
HDAC6-201ENST00000334136 BCAP29Q9UHQ4 241 aa12.24□□□□□ -0.45
HDAC6-201ENST00000334136 TTLL13PA6NNM8 815 aa12.23□□□□□ -0.45
HDAC6-201ENST00000334136 APOEP02649 317 aa12.23□□□□□ -0.45
HDAC6-201ENST00000334136 PAEPP09466 180 aa12.23□□□□□ -0.45
HDAC6-201ENST00000334136 COL6A1P12109 1028 aa12.23□□□□□ -0.45
HDAC6-201ENST00000334136 PTPN1P18031 435 aaKnown RBP12.23□□□□□ -0.45
HDAC6-201ENST00000334136 ITIH2P19823 946 aa12.23□□□□□ -0.45
HDAC6-201ENST00000334136 CYP3A5P20815 502 aa12.23□□□□□ -0.45
HDAC6-201ENST00000334136 CYP4A22Q5TCH4 519 aa12.23□□□□□ -0.45
HDAC6-201ENST00000334136 WDR75Q8IWA0 830 aaKnown RBP12.23□□□□□ -0.45
HDAC6-201ENST00000334136 TRIM42Q8IWZ5 723 aa12.23□□□□□ -0.45
HDAC6-201ENST00000334136 RHOT1Q8IXI2 618 aa12.23□□□□□ -0.45
HDAC6-201ENST00000334136 AGGF1Q8N302 714 aaeCLIP12.23□□□□□ -0.45
HDAC6-201ENST00000334136 STKLD1Q8NE28 680 aa12.23□□□□□ -0.45
HDAC6-201ENST00000334136 CDKL2Q92772 493 aa12.23□□□□□ -0.45
HDAC6-201ENST00000334136 SEMA4DQ92854 862 aa12.23□□□□□ -0.45
HDAC6-201ENST00000334136 KDM4CQ9H3R0 1056 aa12.23□□□□□ -0.45
HDAC6-201ENST00000334136 ABCF3Q9NUQ8 709 aa12.23□□□□□ -0.45
HDAC6-201ENST00000334136 CASP8AP2Q9UKL3 1982 aa12.23□□□□□ -0.45
HDAC6-201ENST00000334136 AGPSO00116 658 aa12.23□□□□□ -0.45
HDAC6-201ENST00000334136 HOXD13P35453 343 aa12.23□□□□□ -0.45
HDAC6-201ENST00000334136 EPHB3P54753 998 aa12.23□□□□□ -0.45
HDAC6-201ENST00000334136 FAF2Q96CS3 445 aa12.23□□□□□ -0.45
HDAC6-201ENST00000334136 SIK2Q9H0K1 926 aa12.23□□□□□ -0.45
HDAC6-201ENST00000334136 NEU2Q9Y3R4 380 aa12.23□□□□□ -0.45
HDAC6-201ENST00000334136 INSL6Q9Y581 213 aa12.23□□□□□ -0.45
HDAC6-201ENST00000334136 ZWINTO95229 277 aa12.23□□□□□ -0.45
HDAC6-201ENST00000334136 SLC12A2P55011 1212 aa12.23□□□□□ -0.45
HDAC6-201ENST00000334136 BST2Q10589 180 aaKnown RBP12.23□□□□□ -0.45
HDAC6-201ENST00000334136 ACAD10Q6JQN1 1059 aa12.23□□□□□ -0.45
HDAC6-201ENST00000334136 RWDD4Q6NW29 188 aaKnown RBP12.23□□□□□ -0.45
HDAC6-201ENST00000334136 SLC13A5Q86YT5 568 aaPredicted RBP12.23□□□□□ -0.45
HDAC6-201ENST00000334136 SLC20A1Q8WUM9 679 aa12.23□□□□□ -0.45
HDAC6-201ENST00000334136 FBXO32Q969P5 355 aa12.23□□□□□ -0.45
HDAC6-201ENST00000334136 TTPALQ9BTX7 342 aa12.23□□□□□ -0.45
HDAC6-201ENST00000334136 CDC42EP4Q9H3Q1 356 aaKnown RBP12.23□□□□□ -0.45
HDAC6-201ENST00000334136 ADAM28Q9UKQ2 775 aa12.23□□□□□ -0.45
HDAC6-201ENST00000334136 MYH11P35749 1972 aa12.23□□□□□ -0.45
HDAC6-201ENST00000334136 SIPA1L1O43166 1804 aa12.23□□□□□ -0.45
HDAC6-201ENST00000334136 ZNF263O14978 683 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms