RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 NHEJ1Q9H9Q4 299 aaPredicted RBP27.15■■□□□ 1.94
SMDT1-201ENST00000331479 POPDC2Q9HBU9 364 aa27.15■■□□□ 1.94
SMDT1-201ENST00000331479 ASNSD1Q9NWL6 643 aa27.15■■□□□ 1.94
SMDT1-201ENST00000331479 IGSF9Q9P2J2 1179 aa27.15■■□□□ 1.94
SMDT1-201ENST00000331479 RTN2O75298 545 aa27.14■■□□□ 1.94
SMDT1-201ENST00000331479 CALB1P05937 261 aa27.14■■□□□ 1.94
SMDT1-201ENST00000331479 GLI1P08151 1106 aa27.14■■□□□ 1.94
SMDT1-201ENST00000331479 MRE11P49959 708 aa27.14■■□□□ 1.94
SMDT1-201ENST00000331479 GFPT1Q06210 699 aaPredicted RBP27.14■■□□□ 1.94
SMDT1-201ENST00000331479 TADA2BQ86TJ2 420 aa27.14■■□□□ 1.94
SMDT1-201ENST00000331479 MIB1Q86YT6 1006 aa27.14■■□□□ 1.94
SMDT1-201ENST00000331479 RNF139Q8WU17 664 aa27.14■■□□□ 1.94
SMDT1-201ENST00000331479 NXPE3Q969Y0 559 aa27.14■■□□□ 1.94
SMDT1-201ENST00000331479 PANX2Q96RD6 677 aa27.14■■□□□ 1.94
SMDT1-201ENST00000331479 KLF16Q9BXK1 252 aaPredicted RBP27.14■■□□□ 1.94
SMDT1-201ENST00000331479 SFMBT1Q9UHJ3 866 aa27.14■■□□□ 1.94
SMDT1-201ENST00000331479 RASAL2Q9UJF2 1139 aa27.14■■□□□ 1.94
SMDT1-201ENST00000331479 LEFTY2O00292 366 aa27.14■■□□□ 1.93
SMDT1-201ENST00000331479 DPYSL4O14531 572 aa27.14■■□□□ 1.93
SMDT1-201ENST00000331479 HSF2BPO75031 334 aa27.14■■□□□ 1.93
SMDT1-201ENST00000331479 GJB6O95452 261 aa27.14■■□□□ 1.93
SMDT1-201ENST00000331479 RNASE9P60153 205 aaKnown RBP27.14■■□□□ 1.93
SMDT1-201ENST00000331479 GRM2Q14416 872 aa27.14■■□□□ 1.93
SMDT1-201ENST00000331479 GSE1Q14687 1217 aa27.14■■□□□ 1.93
SMDT1-201ENST00000331479 BEND5Q7L4P6 421 aa27.14■■□□□ 1.93
SMDT1-201ENST00000331479 DEFB106AQ8N104 65 aa27.14■■□□□ 1.93
SMDT1-201ENST00000331479 SLC44A3Q8N4M1 653 aa27.14■■□□□ 1.93
SMDT1-201ENST00000331479 WBP2Q969T9 261 aa27.14■■□□□ 1.93
SMDT1-201ENST00000331479 SLC2A13Q96QE2 648 aa27.14■■□□□ 1.93
SMDT1-201ENST00000331479 ISCUQ9H1K1 167 aa27.14■■□□□ 1.93
SMDT1-201ENST00000331479 MARCH2Q9P0N8 246 aa27.14■■□□□ 1.93
SMDT1-201ENST00000331479 STRIP2Q9ULQ0 834 aa27.14■■□□□ 1.93
SMDT1-201ENST00000331479 NENFQ9UMX5 172 aa27.14■■□□□ 1.93
SMDT1-201ENST00000331479 SCNN1AP37088 669 aa27.13■■□□□ 1.93
SMDT1-201ENST00000331479 ZNF77Q15935 545 aa27.13■■□□□ 1.93
SMDT1-201ENST00000331479 MSANTD2Q6P1R3 559 aa27.13■■□□□ 1.93
SMDT1-201ENST00000331479 MFSD6LQ8IWD5 586 aa27.13■■□□□ 1.93
SMDT1-201ENST00000331479 E2F7Q96AV8 911 aa27.13■■□□□ 1.93
SMDT1-201ENST00000331479 DEF6Q9H4E7 631 aa27.13■■□□□ 1.93
SMDT1-201ENST00000331479 KIF9Q9HAQ2 790 aa27.13■■□□□ 1.93
SMDT1-201ENST00000331479 OLA1Q9NTK5 396 aaKnown RBP27.13■■□□□ 1.93
SMDT1-201ENST00000331479 OBP2AQ9NY56 170 aa27.13■■□□□ 1.93
SMDT1-201ENST00000331479 TMEM59LQ9UK28 342 aa27.13■■□□□ 1.93
SMDT1-201ENST00000331479 CAPN9O14815 690 aa27.12■■□□□ 1.93
SMDT1-201ENST00000331479 RRM1P23921 792 aa27.12■■□□□ 1.93
SMDT1-201ENST00000331479 GSCP56915 257 aaPredicted RBP27.12■■□□□ 1.93
SMDT1-201ENST00000331479 PITX1P78337 314 aaPredicted RBP27.12■■□□□ 1.93
SMDT1-201ENST00000331479 USP4Q13107 963 aa27.12■■□□□ 1.93
SMDT1-201ENST00000331479 SLC18A3Q16572 532 aa27.12■■□□□ 1.93
SMDT1-201ENST00000331479 DCAF6Q58WW2 860 aa27.12■■□□□ 1.93
SMDT1-201ENST00000331479 PPP1R2P3Q6NXS1 205 aa27.12■■□□□ 1.93
SMDT1-201ENST00000331479 ALKBH5Q6P6C2 394 aaKnown RBP27.12■■□□□ 1.93
SMDT1-201ENST00000331479 BPIFB1Q8TDL5 484 aa27.12■■□□□ 1.93
SMDT1-201ENST00000331479 CCDC42Q96M95 316 aa27.12■■□□□ 1.93
SMDT1-201ENST00000331479 SMOC2Q9H3U7 446 aa27.12■■□□□ 1.93
SMDT1-201ENST00000331479 METTL5Q9NRN9 209 aaKnown RBP27.12■■□□□ 1.93
SMDT1-201ENST00000331479 WDR35Q9P2L0 1181 aa27.12■■□□□ 1.93
SMDT1-201ENST00000331479 TCRBV5S1A1TA0A578 114 aa27.11■■□□□ 1.93
SMDT1-201ENST00000331479 CCDC122Q5T0U0 273 aa27.11■■□□□ 1.93
SMDT1-201ENST00000331479 TRNP1Q6NT89 227 aa27.11■■□□□ 1.93
SMDT1-201ENST00000331479 ADAM32Q8TC27 787 aa27.11■■□□□ 1.93
SMDT1-201ENST00000331479 DQX1Q8TE96 717 aaKnown RBP27.11■■□□□ 1.93
SMDT1-201ENST00000331479 VCPIP1Q96JH7 1222 aa27.11■■□□□ 1.93
SMDT1-201ENST00000331479 TRIM62Q9BVG3 475 aa27.11■■□□□ 1.93
SMDT1-201ENST00000331479 CFAP97Q9P2B7 532 aa27.11■■□□□ 1.93
SMDT1-201ENST00000331479 TRIOO75962 3097 aa27.1■■□□□ 1.93
SMDT1-201ENST00000331479 SCAMP3O14828 347 aaKnown RBP27.1■■□□□ 1.93
SMDT1-201ENST00000331479 ATMINO43313 823 aaPredicted RBP27.1■■□□□ 1.93
SMDT1-201ENST00000331479 MSI1O43347 362 aaKnown RBP27.1■■□□□ 1.93
SMDT1-201ENST00000331479 AKR1B10O60218 316 aa27.1■■□□□ 1.93
SMDT1-201ENST00000331479 DAB1O75553 588 aa27.1■■□□□ 1.93
SMDT1-201ENST00000331479 IRF1P10914 325 aa27.1■■□□□ 1.93
SMDT1-201ENST00000331479 TCF3P15923 654 aa27.1■■□□□ 1.93
SMDT1-201ENST00000331479 PSMC3P17980 439 aa27.1■■□□□ 1.93
SMDT1-201ENST00000331479 FECHP22830 423 aa27.1■■□□□ 1.93
SMDT1-201ENST00000331479 FLT3P36888 993 aa27.1■■□□□ 1.93
SMDT1-201ENST00000331479 C3orf20Q8ND61 904 aa27.1■■□□□ 1.93
SMDT1-201ENST00000331479 SPTLC3Q9NUV7 552 aa27.1■■□□□ 1.93
SMDT1-201ENST00000331479 SLC12A8A0AV02 714 aa27.09■■□□□ 1.93
SMDT1-201ENST00000331479 NARSO43776 548 aaKnown RBP27.09■■□□□ 1.93
SMDT1-201ENST00000331479 FCHO2Q0JRZ9 810 aa27.09■■□□□ 1.93
SMDT1-201ENST00000331479 TDGQ13569 410 aa27.09■■□□□ 1.93
SMDT1-201ENST00000331479 MTF1Q14872 753 aa27.09■■□□□ 1.93
SMDT1-201ENST00000331479 TAC4Q86UU9 113 aa27.09■■□□□ 1.93
SMDT1-201ENST00000331479 EMC1Q8N766 993 aa27.09■■□□□ 1.93
SMDT1-201ENST00000331479 JOSD2Q8TAC2 188 aa27.09■■□□□ 1.93
SMDT1-201ENST00000331479 ZFYVE19Q96K21 471 aa27.09■■□□□ 1.93
SMDT1-201ENST00000331479 MUTYHQ9UIF7 546 aa27.09■■□□□ 1.93
SMDT1-201ENST00000331479 HMBSP08397 361 aa27.09■■□□□ 1.93
SMDT1-201ENST00000331479 MATKP42679 507 aa27.09■■□□□ 1.93
SMDT1-201ENST00000331479 DEPDC1BQ8WUY9 529 aa27.09■■□□□ 1.93
SMDT1-201ENST00000331479 ADAM33Q9BZ11 813 aa27.09■■□□□ 1.93
SMDT1-201ENST00000331479 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP27.09■■□□□ 1.931e-7■■■■□ 24.3
SMDT1-201ENST00000331479 GREM1O60565 184 aa27.08■■□□□ 1.93
SMDT1-201ENST00000331479 KRT3P12035 628 aa27.08■■□□□ 1.93
SMDT1-201ENST00000331479 ABCB4P21439 1286 aa27.08■■□□□ 1.93
SMDT1-201ENST00000331479 NOS2P35228 1153 aa27.08■■□□□ 1.93
SMDT1-201ENST00000331479 COG7P83436 770 aa27.08■■□□□ 1.93
SMDT1-201ENST00000331479 DNAJC24Q6P3W2 148 aa27.08■■□□□ 1.93
SMDT1-201ENST00000331479 ASIC4Q96FT7 647 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms