RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 LXNQ9BS40 222 aa25.18■■□□□ 1.62
SOX1-201ENST00000330949 DDX56Q9NY93 547 aaKnown RBP25.18■■□□□ 1.62
SOX1-201ENST00000330949 HERC5Q9UII4 1024 aaKnown RBP25.18■■□□□ 1.62
SOX1-201ENST00000330949 ARHGAP26Q9UNA1 814 aa25.18■■□□□ 1.62
SOX1-201ENST00000330949 HALP42357 657 aa25.18■■□□□ 1.62
SOX1-201ENST00000330949 PPP1R2P3Q6NXS1 205 aa25.18■■□□□ 1.62
SOX1-201ENST00000330949 ZFP1Q6P2D0 407 aa25.18■■□□□ 1.62
SOX1-201ENST00000330949 PHF13Q86YI8 300 aaPredicted RBP25.18■■□□□ 1.62
SOX1-201ENST00000330949 TICAM1Q8IUC6 712 aa25.18■■□□□ 1.62
SOX1-201ENST00000330949 WDR18Q9BV38 432 aa25.18■■□□□ 1.62
SOX1-201ENST00000330949 ZC3H11AO75152 810 aaKnown RBP eCLIP25.17■■□□□ 1.62
SOX1-201ENST00000330949 FBXO21O94952 628 aa25.17■■□□□ 1.62
SOX1-201ENST00000330949 ALDH2P05091 517 aa25.17■■□□□ 1.62
SOX1-201ENST00000330949 PHKA2P46019 1235 aa25.17■■□□□ 1.62
SOX1-201ENST00000330949 STT3AP46977 705 aa25.17■■□□□ 1.62
SOX1-201ENST00000330949 ENTPD1P49961 510 aa25.17■■□□□ 1.62
SOX1-201ENST00000330949 NOMO3P69849 1222 aa25.17■■□□□ 1.62
SOX1-201ENST00000330949 AOC3Q16853 763 aa25.17■■□□□ 1.62
SOX1-201ENST00000330949 ELMO3Q96BJ8 720 aa25.17■■□□□ 1.62
SOX1-201ENST00000330949 KLC2Q9H0B6 622 aa25.17■■□□□ 1.62
SOX1-201ENST00000330949 LY75O60449 1722 aa25.17■■□□□ 1.62
SOX1-201ENST00000330949 PFKPQ01813 784 aa25.17■■□□□ 1.62
SOX1-201ENST00000330949 C1QBPQ07021 282 aaKnown RBP25.17■■□□□ 1.62
SOX1-201ENST00000330949 C6orf52Q5T4I8 152 aa25.17■■□□□ 1.62
SOX1-201ENST00000330949 HAUS6Q7Z4H7 955 aa25.17■■□□□ 1.62
SOX1-201ENST00000330949 TAB3Q8N5C8 712 aaPredicted RBP25.17■■□□□ 1.62
SOX1-201ENST00000330949 PPM1NQ8N819 430 aa25.17■■□□□ 1.62
SOX1-201ENST00000330949 NUF2Q9BZD4 464 aa25.17■■□□□ 1.62
SOX1-201ENST00000330949 DHX33Q9H6R0 707 aaKnown RBP25.17■■□□□ 1.62
SOX1-201ENST00000330949 PNPLA8Q9NP80 782 aa25.17■■□□□ 1.62
SOX1-201ENST00000330949 TBC1D23Q9NUY8 699 aa25.17■■□□□ 1.62
SOX1-201ENST00000330949 BASP1P80723 227 aaKnown RBP25.16■■□□□ 1.62
SOX1-201ENST00000330949 GTF2BQ00403 316 aa25.16■■□□□ 1.62
SOX1-201ENST00000330949 ABCB5Q2M3G0 1257 aa25.16■■□□□ 1.62
SOX1-201ENST00000330949 ACTL9Q8TC94 416 aa25.16■■□□□ 1.62
SOX1-201ENST00000330949 TMC2Q8TDI7 906 aa25.16■■□□□ 1.62
SOX1-201ENST00000330949 TRIM56Q9BRZ2 755 aaKnown RBP25.16■■□□□ 1.62
SOX1-201ENST00000330949 WDR11Q9BZH6 1224 aa25.16■■□□□ 1.62
SOX1-201ENST00000330949 IFT122Q9HBG6 1241 aa25.16■■□□□ 1.62
SOX1-201ENST00000330949 TEX264Q9Y6I9 313 aa25.16■■□□□ 1.62
SOX1-201ENST00000330949 ADCY6O43306 1168 aa25.16■■□□□ 1.62
SOX1-201ENST00000330949 OTUD4Q01804 1114 aaKnown RBP25.16■■□□□ 1.62
SOX1-201ENST00000330949 ACAP1Q15027 740 aa25.16■■□□□ 1.62
SOX1-201ENST00000330949 TMEM53Q6P2H8 277 aa25.16■■□□□ 1.62
SOX1-201ENST00000330949 SV2AQ7L0J3 742 aa25.16■■□□□ 1.62
SOX1-201ENST00000330949 SHCBP1LQ9BZQ2 653 aa25.16■■□□□ 1.62
SOX1-201ENST00000330949 TOPORSQ9NS56 1045 aaPredicted RBP25.16■■□□□ 1.62
SOX1-201ENST00000330949 DNAJC16Q9Y2G8 782 aa25.16■■□□□ 1.62
SOX1-201ENST00000330949 FADS3Q9Y5Q0 445 aa25.16■■□□□ 1.62
SOX1-201ENST00000330949 KAT6AQ92794 2004 aa25.15■■□□□ 1.62
SOX1-201ENST00000330949 RFPL1O75677 317 aa25.15■■□□□ 1.62
SOX1-201ENST00000330949 PDGFRBP09619 1106 aa25.15■■□□□ 1.62
SOX1-201ENST00000330949 ZCCHC23Q6ZST2 131 aa25.15■■□□□ 1.62
SOX1-201ENST00000330949 CCDC17Q96LX7 622 aa25.15■■□□□ 1.62
SOX1-201ENST00000330949 PI4KBQ9UBF8 816 aa25.15■■□□□ 1.62
SOX1-201ENST00000330949 STK39Q9UEW8 545 aa25.15■■□□□ 1.62
SOX1-201ENST00000330949 FBP2O00757 339 aa25.15■■□□□ 1.62
SOX1-201ENST00000330949 PSMC3P17980 439 aa25.15■■□□□ 1.62
SOX1-201ENST00000330949 ALDH3B2P48448 385 aa25.15■■□□□ 1.62
SOX1-201ENST00000330949 CCR3P51677 355 aa25.15■■□□□ 1.62
SOX1-201ENST00000330949 FRMD7Q6ZUT3 714 aa25.15■■□□□ 1.62
SOX1-201ENST00000330949 EFCAB3Q8N7B9 438 aa25.15■■□□□ 1.62
SOX1-201ENST00000330949 INO80BQ9C086 356 aaPredicted RBP25.15■■□□□ 1.62
SOX1-201ENST00000330949 LIN28AQ9H9Z2 209 aaKnown RBP25.15■■□□□ 1.62
SOX1-201ENST00000330949 BCAP29Q9UHQ4 241 aa25.15■■□□□ 1.62
SOX1-201ENST00000330949 RIMS3Q9UJD0 308 aa25.15■■□□□ 1.62
SOX1-201ENST00000330949 EFR3BQ9Y2G0 817 aa25.15■■□□□ 1.62
SOX1-201ENST00000330949 TFB1MQ8WVM0 346 aaKnown RBP25.14■■□□□ 1.62
SOX1-201ENST00000330949 PI4K2AQ9BTU6 479 aa25.14■■□□□ 1.62
SOX1-201ENST00000330949 SLC2A11Q9BYW1 496 aa25.14■■□□□ 1.62
SOX1-201ENST00000330949 HEMK1Q9Y5R4 338 aaPredicted RBP25.14■■□□□ 1.62
SOX1-201ENST00000330949 TOM1L1O75674 476 aa25.14■■□□□ 1.61
SOX1-201ENST00000330949 PRDX6P30041 224 aa25.14■■□□□ 1.61
SOX1-201ENST00000330949 CRHR1P34998 444 aa25.14■■□□□ 1.61
SOX1-201ENST00000330949 RPL7AP62424 266 aaKnown RBP25.14■■□□□ 1.61
SOX1-201ENST00000330949 PDPK2PQ6A1A2 396 aa25.14■■□□□ 1.61
SOX1-201ENST00000330949 SERPINI1Q99574 410 aa25.14■■□□□ 1.61
SOX1-201ENST00000330949 ST6GALNAC4Q9H4F1 302 aa25.14■■□□□ 1.61
SOX1-201ENST00000330949 IGSF9Q9P2J2 1179 aa25.14■■□□□ 1.61
SOX1-201ENST00000330949 AGTPBP1Q9UPW5 1226 aa25.14■■□□□ 1.61
SOX1-201ENST00000330949 KRT38O76015 456 aa25.13■■□□□ 1.61
SOX1-201ENST00000330949 ABRAQ8N0Z2 381 aa25.13■■□□□ 1.61
SOX1-201ENST00000330949 NLRP7Q8WX94 980 aa25.13■■□□□ 1.61
SOX1-201ENST00000330949 LOC100653049A0A140TA62 436 aa25.13■■□□□ 1.61
SOX1-201ENST00000330949 TMEM191CA6NGB0 347 aa25.13■■□□□ 1.61
SOX1-201ENST00000330949 KRT34O76011 436 aa25.13■■□□□ 1.61
SOX1-201ENST00000330949 TMEM191BP0C7N4 346 aa25.13■■□□□ 1.61
SOX1-201ENST00000330949 PPARGP37231 505 aaPredicted RBP25.13■■□□□ 1.61
SOX1-201ENST00000330949 ITPKCQ96DU7 683 aa25.13■■□□□ 1.61
SOX1-201ENST00000330949 CSRNP1Q96S65 589 aa25.13■■□□□ 1.61
SOX1-201ENST00000330949 C10orf88Q9H8K7 445 aa25.13■■□□□ 1.61
SOX1-201ENST00000330949 DNAJC28Q9NX36 388 aa25.13■■□□□ 1.61
SOX1-201ENST00000330949 P4HBP07237 508 aaKnown RBP25.13■■□□□ 1.61
SOX1-201ENST00000330949 DYNLT1P63172 113 aa25.13■■□□□ 1.61
SOX1-201ENST00000330949 CYTH1Q15438 398 aa25.13■■□□□ 1.61
SOX1-201ENST00000330949 HHIPL2Q6UWX4 724 aa25.13■■□□□ 1.61
SOX1-201ENST00000330949 ACSF2Q96CM8 615 aaPredicted RBP25.13■■□□□ 1.61
SOX1-201ENST00000330949 SAE1Q9UBE0 346 aaPredicted RBP25.13■■□□□ 1.61
SOX1-201ENST00000330949 ZBTB21Q9ULJ3 1066 aa25.13■■□□□ 1.61
SOX1-201ENST00000330949 KLRG2A4D1S0 409 aaPredicted RBP25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms