RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 ARID3BQ8IVW6 561 aaPredicted RBP6.74□□□□□ -1.33
SMG1-201ENST00000330588 ZC3H3Q8IXZ2 948 aaKnown RBP6.74□□□□□ -1.33
SMG1-201ENST00000330588 GRAMD1CQ8IYS0 662 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 CMTM8Q8IZV2 173 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 CNPY4Q8N129 248 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 TTC39CQ8N584 583 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 FLCNQ8NFG4 579 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 ENGASEQ8NFI3 743 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 EXOC4Q96A65 974 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 TNIP3Q96KP6 325 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 ZSWIM3Q96MP5 696 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 BCO2Q9BYV7 579 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 PLA2G2FQ9BZM2 168 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 ELOVL4Q9GZR5 314 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 DNAI2Q9GZS0 605 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 SNX25Q9H3E2 840 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 ATXN3LQ9H3M9 355 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 GOLPH3LQ9H4A5 285 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 BRD9Q9H8M2 597 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 TMLHEQ9NVH6 421 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 THG1LQ9NWX6 298 aaKnown RBP6.74□□□□□ -1.33
SMG1-201ENST00000330588 MAGEC2Q9UBF1 373 aaPredicted RBP6.74□□□□□ -1.33
SMG1-201ENST00000330588 CA14Q9ULX7 337 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 GREB1Q4ZG55 1949 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 MYBPHLA2RUH7 354 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 GOLGA6L4A6NEF3 574 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 SHISA7A6NL88 538 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 LRRIQ3A6PVS8 624 aaPredicted RBP6.74□□□□□ -1.33
SMG1-201ENST00000330588 PI15O43692 258 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 SMC2O95347 1197 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 CST3P01034 146 aaPredicted RBP6.74□□□□□ -1.33
SMG1-201ENST00000330588 PSMC2P35998 433 aaKnown RBP6.74□□□□□ -1.33
SMG1-201ENST00000330588 GNL1P36915 607 aaPredicted RBP6.74□□□□□ -1.33
SMG1-201ENST00000330588 VAMP7P51809 220 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 ANGPT1Q15389 498 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 ZNF699Q32M78 642 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 WDR72Q3MJ13 1102 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 ZNF667Q5HYK9 610 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 DGKKQ5KSL6 1271 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 GPR158Q5T848 1215 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 LCE3BQ5TA77 95 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 TDRD10Q5VZ19 366 aaKnown RBP6.74□□□□□ -1.33
SMG1-201ENST00000330588 LMBRD2Q68DH5 695 aaPredicted RBP6.74□□□□□ -1.33
SMG1-201ENST00000330588 TPRG1Q6ZUI0 275 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 TMEM150AQ86TG1 271 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 C1orf210Q8IVY1 113 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 YAF2Q8IY57 180 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 SYNPOQ8N3V7 929 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 IL22RA1Q8N6P7 574 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 B3GALNT2Q8NCR0 500 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 BPIFB1Q8TDL5 484 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 MRPS31Q92665 395 aaKnown RBP6.74□□□□□ -1.33
SMG1-201ENST00000330588 NELL1Q92832 810 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 ATOH1Q92858 354 aaPredicted RBP6.74□□□□□ -1.33
SMG1-201ENST00000330588 CCDC127Q96BQ5 260 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 CITED4Q96RK1 184 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 IMPG2Q9BZV3 1241 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 CHRDQ9H2X0 955 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 SLITRK6Q9H5Y7 841 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 CYP3A43Q9HB55 503 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 CRTAC1Q9NQ79 661 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 PRMT8Q9NR22 394 aaPredicted RBP6.74□□□□□ -1.33
SMG1-201ENST00000330588 GTF3C4Q9UKN8 822 aa6.74□□□□□ -1.33
SMG1-201ENST00000330588 HELZP42694 1942 aaKnown RBP6.73□□□□□ -1.33
SMG1-201ENST00000330588 FANCMQ8IYD8 2048 aa6.73□□□□□ -1.33
SMG1-201ENST00000330588 TICRRQ7Z2Z1 1910 aa6.73□□□□□ -1.33
SMG1-201ENST00000330588 FAM92AA1XBS5 289 aa6.73□□□□□ -1.33
SMG1-201ENST00000330588 SLC38A8A6NNN8 435 aa6.73□□□□□ -1.33
SMG1-201ENST00000330588 PMM2O15305 246 aa6.73□□□□□ -1.33
SMG1-201ENST00000330588 SLC16A3O15427 465 aaKnown RBP6.73□□□□□ -1.33
SMG1-201ENST00000330588 PHACTR2O75167 634 aa6.73□□□□□ -1.33
SMG1-201ENST00000330588 ALX3O95076 343 aa6.73□□□□□ -1.33
SMG1-201ENST00000330588 RTN3O95197 1032 aaPredicted RBP6.73□□□□□ -1.33
SMG1-201ENST00000330588 VNN1O95497 513 aa6.73□□□□□ -1.33
SMG1-201ENST00000330588 OLFM2O95897 454 aa6.73□□□□□ -1.33
SMG1-201ENST00000330588 ASS1P00966 412 aaKnown RBP6.73□□□□□ -1.33
SMG1-201ENST00000330588 USP17L7P0C7H9 530 aa6.73□□□□□ -1.33
SMG1-201ENST00000330588 KRT13P13646 458 aa6.73□□□□□ -1.33
SMG1-201ENST00000330588 PTPN1P18031 435 aaKnown RBP6.73□□□□□ -1.33
SMG1-201ENST00000330588 FSTP19883 344 aa6.73□□□□□ -1.33
SMG1-201ENST00000330588 NR2F2P24468 414 aa6.73□□□□□ -1.33
SMG1-201ENST00000330588 CYP2F1P24903 491 aa6.73□□□□□ -1.33
SMG1-201ENST00000330588 ANXA13P27216 316 aa6.73□□□□□ -1.33
SMG1-201ENST00000330588 GDI1P31150 447 aa6.73□□□□□ -1.33
SMG1-201ENST00000330588 HOXA6P31267 233 aa6.73□□□□□ -1.33
SMG1-201ENST00000330588 AVPR1AP37288 418 aa6.73□□□□□ -1.33
SMG1-201ENST00000330588 TUBP50607 506 aa6.73□□□□□ -1.33
SMG1-201ENST00000330588 MYL6P60660 151 aa6.73□□□□□ -1.33
SMG1-201ENST00000330588 AMPD2Q01433 879 aa6.73□□□□□ -1.33
SMG1-201ENST00000330588 LRRC63Q05C16 580 aa6.73□□□□□ -1.33
SMG1-201ENST00000330588 INCA1Q0VD86 236 aa6.73□□□□□ -1.33
SMG1-201ENST00000330588 LRRC32Q14392 662 aa6.73□□□□□ -1.33
SMG1-201ENST00000330588 PPP2R5DQ14738 602 aa6.73□□□□□ -1.33
SMG1-201ENST00000330588 PDGFRLQ15198 375 aa6.73□□□□□ -1.33
SMG1-201ENST00000330588 ZNF658Q5TYW1 1059 aaPredicted RBP6.73□□□□□ -1.33
SMG1-201ENST00000330588 SNX30Q5VWJ9 437 aa6.73□□□□□ -1.33
SMG1-201ENST00000330588 DDX42Q86XP3 938 aaKnown RBP eCLIP6.73□□□□□ -1.33
SMG1-201ENST00000330588 CACTIN-AS1Q8N1I8 211 aa6.73□□□□□ -1.33
SMG1-201ENST00000330588 CRYBG2Q8N1P7 616 aa6.73□□□□□ -1.33
SMG1-201ENST00000330588 PDZD8Q8NEN9 1154 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 141.5 ms