RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 FBXO36Q8NEA4 188 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 SLC35B2Q8TB61 432 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 ACMSDQ8TDX5 336 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 RTFDC1Q9BY42 306 aaPredicted RBP8.67□□□□□ -1.02
SKA2-201ENST00000330137 YTHDF1Q9BYJ9 559 aaKnown RBP8.67□□□□□ -1.02
SKA2-201ENST00000330137 XAB2Q9HCS7 855 aaKnown RBP8.67□□□□□ -1.02
SKA2-201ENST00000330137 NCKIPSDQ9NZQ3 722 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.67□□□□□ -1.02
SKA2-201ENST00000330137 CLEC11AQ9Y240 323 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 IFT52Q9Y366 437 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 C2orf71A6NGG8 1288 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 K7EPI3 171 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 ZBTB11O95625 1053 aaPredicted RBP8.67□□□□□ -1.02
SKA2-201ENST00000330137 FOSP01100 380 aaPredicted RBP8.67□□□□□ -1.02
SKA2-201ENST00000330137 LDHCP07864 332 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 VDRP11473 427 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 ZNF26P17031 533 aaPredicted RBP8.67□□□□□ -1.02
SKA2-201ENST00000330137 NFKBIAP25963 317 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 SSTR1P30872 391 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 TRPC1P48995 793 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 NUMBP49757 651 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 SERPINB9P50453 376 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 SLC5A3P53794 718 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 EVX2Q03828 476 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 UBAP2LQ14157 1087 aaKnown RBP8.67□□□□□ -1.02
SKA2-201ENST00000330137 RALGPS1Q5JS13 557 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 C16orf87Q6PH81 154 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 SLC47A2Q86VL8 602 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 CPNE8Q86YQ8 564 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 FAM178BQ8IXR5 827 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 PEX5LQ8IYB4 626 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 PACRGLQ8N7B6 248 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 POU5F2Q8N7G0 328 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 COA7Q96BR5 231 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 CNDP1Q96KN2 507 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 SLITRK1Q96PX8 696 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 MROQ9BYG7 248 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 MRGBPQ9NV56 204 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 KLHL3Q9UH77 587 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 IP6K2Q9UHH9 426 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 IPO11Q9UI26 975 aaKnown RBP8.67□□□□□ -1.02
SKA2-201ENST00000330137 ERVK-11Q9UQG0 969 aa8.67□□□□□ -1.02
SKA2-201ENST00000330137 PSMD12O00232 456 aaPredicted RBP8.66□□□□□ -1.02
SKA2-201ENST00000330137 ZBTB5O15062 677 aa8.66□□□□□ -1.02
SKA2-201ENST00000330137 AQP9O43315 295 aa8.66□□□□□ -1.02
SKA2-201ENST00000330137 GCATO75600 419 aa8.66□□□□□ -1.02
SKA2-201ENST00000330137 C7P10643 843 aa8.66□□□□□ -1.02
SKA2-201ENST00000330137 MCF2P10911 925 aa8.66□□□□□ -1.02
SKA2-201ENST00000330137 POLD1P28340 1107 aa8.66□□□□□ -1.02
SKA2-201ENST00000330137 NMT1P30419 496 aaKnown RBP8.66□□□□□ -1.02
SKA2-201ENST00000330137 RXRGP48443 463 aa8.66□□□□□ -1.02
SKA2-201ENST00000330137 MXI1P50539 228 aa8.66□□□□□ -1.02
SKA2-201ENST00000330137 PSMC6P62333 389 aa8.66□□□□□ -1.02
SKA2-201ENST00000330137 GCNT1Q02742 428 aa8.66□□□□□ -1.02
SKA2-201ENST00000330137 KCNA1Q09470 495 aa8.66□□□□□ -1.02
SKA2-201ENST00000330137 PHKG1Q16816 387 aa8.66□□□□□ -1.02
SKA2-201ENST00000330137 HP1BP3Q5SSJ5 553 aaPredicted RBP8.66□□□□□ -1.02
SKA2-201ENST00000330137 NANOGP8Q6NSW7 305 aa8.66□□□□□ -1.02
SKA2-201ENST00000330137 HPS6Q86YV9 775 aa8.66□□□□□ -1.02
SKA2-201ENST00000330137 TMEM102Q8N9M5 508 aaPredicted RBP8.66□□□□□ -1.02
SKA2-201ENST00000330137 PNPT1Q8TCS8 783 aaKnown RBP8.66□□□□□ -1.02
SKA2-201ENST00000330137 CPT1BQ92523 772 aa8.66□□□□□ -1.02
SKA2-201ENST00000330137 C12orf43Q96C57 262 aaKnown RBP8.66□□□□□ -1.02
SKA2-201ENST00000330137 KREMEN1Q96MU8 473 aa8.66□□□□□ -1.02
SKA2-201ENST00000330137 HEMGNQ9BXL5 484 aa8.66□□□□□ -1.02
SKA2-201ENST00000330137 VTA1Q9NP79 307 aa8.66□□□□□ -1.02
SKA2-201ENST00000330137 LOC102724428A0A0B4J2F2 783 aa8.66□□□□□ -1.02
SKA2-201ENST00000330137 ARHGEF37A1IGU5 675 aa8.66□□□□□ -1.02
SKA2-201ENST00000330137 CENPBD1B2RD01 187 aa8.66□□□□□ -1.02
SKA2-201ENST00000330137 CFAP99D6REC4 459 aa8.66□□□□□ -1.02
SKA2-201ENST00000330137 GOLGA8RI6L899 631 aa8.66□□□□□ -1.02
SKA2-201ENST00000330137 ABCB7O75027 752 aa8.66□□□□□ -1.02
SKA2-201ENST00000330137 BCAS2O75934 225 aaPredicted RBP8.66□□□□□ -1.02
SKA2-201ENST00000330137 ZBTB7AO95365 584 aa8.66□□□□□ -1.02
SKA2-201ENST00000330137 BMP3P12645 472 aa8.66□□□□□ -1.02
SKA2-201ENST00000330137 COX4I1P13073 169 aa8.66□□□□□ -1.02
SKA2-201ENST00000330137 KRT5P13647 590 aa8.66□□□□□ -1.02
SKA2-201ENST00000330137 JAK1P23458 1154 aa8.66□□□□□ -1.02
SKA2-201ENST00000330137 CDK8P49336 464 aa8.66□□□□□ -1.02
SKA2-201ENST00000330137 PCYT1AP49585 367 aa8.66□□□□□ -1.02
SKA2-201ENST00000330137 SIK1P57059 783 aa8.66□□□□□ -1.02
SKA2-201ENST00000330137 EFTUD2Q15029 972 aaKnown RBP eCLIP8.66□□□□□ -1.028e-12■■■■□ 22.2
SKA2-201ENST00000330137 OXA1LQ15070 435 aa8.66□□□□□ -1.02
SKA2-201ENST00000330137 TEDDM1Q5T9Z0 273 aa8.66□□□□□ -1.02
SKA2-201ENST00000330137 PLEKHA7Q6IQ23 1121 aa8.66□□□□□ -1.02
SKA2-201ENST00000330137 GADL1Q6ZQY3 521 aa8.66□□□□□ -1.02
SKA2-201ENST00000330137 CYS1Q717R9 158 aa8.66□□□□□ -1.02
SKA2-201ENST00000330137 USP37Q86T82 979 aa8.66□□□□□ -1.02
SKA2-201ENST00000330137 RHPN2Q8IUC4 686 aa8.66□□□□□ -1.02
SKA2-201ENST00000330137 LRRC49Q8IUZ0 686 aa8.66□□□□□ -1.02
SKA2-201ENST00000330137 ATP6V0D2Q8N8Y2 350 aa8.66□□□□□ -1.02
SKA2-201ENST00000330137 LRRC39Q96DD0 335 aa8.66□□□□□ -1.02
SKA2-201ENST00000330137 DYNLL2Q96FJ2 89 aa8.66□□□□□ -1.02
SKA2-201ENST00000330137 FERMT1Q9BQL6 677 aa8.66□□□□□ -1.02
SKA2-201ENST00000330137 VAT1LQ9HCJ6 419 aa8.66□□□□□ -1.02
SKA2-201ENST00000330137 ALG13Q9NP73 1137 aaKnown RBP8.66□□□□□ -1.02
SKA2-201ENST00000330137 OLAHQ9NV23 265 aa8.66□□□□□ -1.02
SKA2-201ENST00000330137 TRNAU1APQ9NX07 287 aaKnown RBP8.66□□□□□ -1.02
SKA2-201ENST00000330137 CARD8Q9Y2G2 431 aa8.66□□□□□ -1.02
SKA2-201ENST00000330137 RNF11Q9Y3C5 154 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms