RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 CXCL10P02778 98 aa21.11■□□□□ 0.97
RIPPLY3-201ENST00000329553 FYNP06241 537 aa21.11■□□□□ 0.97
RIPPLY3-201ENST00000329553 USP17L7P0C7H9 530 aa21.11■□□□□ 0.97
RIPPLY3-201ENST00000329553 KLRC2P26717 231 aa21.11■□□□□ 0.97
RIPPLY3-201ENST00000329553 MAP7D3Q8IWC1 876 aa21.11■□□□□ 0.97
RIPPLY3-201ENST00000329553 GLIS1Q8NBF1 620 aa21.11■□□□□ 0.97
RIPPLY3-201ENST00000329553 TTC13Q8NBP0 860 aa21.11■□□□□ 0.97
RIPPLY3-201ENST00000329553 NT5C3BQ969T7 300 aa21.11■□□□□ 0.97
RIPPLY3-201ENST00000329553 SLC2A13Q96QE2 648 aa21.11■□□□□ 0.97
RIPPLY3-201ENST00000329553 MAK16Q9BXY0 300 aaKnown RBP21.11■□□□□ 0.97
RIPPLY3-201ENST00000329553 MAGEB5Q9BZ81 275 aa21.11■□□□□ 0.97
RIPPLY3-201ENST00000329553 PCDH18Q9HCL0 1135 aa21.11■□□□□ 0.97
RIPPLY3-201ENST00000329553 HCSTQ9UBK5 93 aa21.11■□□□□ 0.97
RIPPLY3-201ENST00000329553 FAM107AO95990 144 aa21.1■□□□□ 0.97
RIPPLY3-201ENST00000329553 ITIH2P19823 946 aa21.1■□□□□ 0.97
RIPPLY3-201ENST00000329553 ADCY8P40145 1251 aa21.1■□□□□ 0.97
RIPPLY3-201ENST00000329553 SULT1E1P49888 294 aa21.1■□□□□ 0.97
RIPPLY3-201ENST00000329553 SEC24CP53992 1094 aa21.1■□□□□ 0.97
RIPPLY3-201ENST00000329553 BCAR1P56945 870 aa21.1■□□□□ 0.97
RIPPLY3-201ENST00000329553 CALCOCO2Q13137 446 aa21.1■□□□□ 0.97
RIPPLY3-201ENST00000329553 MAPRE1Q15691 268 aaKnown RBP21.1■□□□□ 0.97
RIPPLY3-201ENST00000329553 OTUD1Q5VV17 481 aaPredicted RBP21.1■□□□□ 0.97
RIPPLY3-201ENST00000329553 DEFB128Q7Z7B8 93 aa21.1■□□□□ 0.97
RIPPLY3-201ENST00000329553 ALLCQ8N6M5 410 aa21.1■□□□□ 0.97
RIPPLY3-201ENST00000329553 DIS3LQ8TF46 1054 aaKnown RBP21.1■□□□□ 0.97
RIPPLY3-201ENST00000329553 TOX2Q96NM4 488 aa21.1■□□□□ 0.97
RIPPLY3-201ENST00000329553 RNF157Q96PX1 679 aa21.1■□□□□ 0.97
RIPPLY3-201ENST00000329553 NPY6RQ99463 290 aa21.1■□□□□ 0.97
RIPPLY3-201ENST00000329553 TMEM121Q9BTD3 319 aa21.1■□□□□ 0.97
RIPPLY3-201ENST00000329553 POPDC2Q9HBU9 364 aa21.1■□□□□ 0.97
RIPPLY3-201ENST00000329553 NAALADL1Q9UQQ1 740 aa21.1■□□□□ 0.97
RIPPLY3-201ENST00000329553 OAZ2O95190 189 aa21.1■□□□□ 0.97
RIPPLY3-201ENST00000329553 OR4Q2P0C623 313 aa21.1■□□□□ 0.97
RIPPLY3-201ENST00000329553 PECAM1P16284 738 aaPredicted RBP21.1■□□□□ 0.97
RIPPLY3-201ENST00000329553 CCDC185Q8N715 623 aa21.1■□□□□ 0.97
RIPPLY3-201ENST00000329553 CCDC89Q8N998 374 aa21.1■□□□□ 0.97
RIPPLY3-201ENST00000329553 SNF8Q96H20 258 aa21.1■□□□□ 0.97
RIPPLY3-201ENST00000329553 ATP8A1Q9Y2Q0 1164 aa21.1■□□□□ 0.97
RIPPLY3-201ENST00000329553 TRAPPC3O43617 180 aa21.09■□□□□ 0.97
RIPPLY3-201ENST00000329553 ZBED1O96006 694 aa21.09■□□□□ 0.97
RIPPLY3-201ENST00000329553 ITGAVP06756 1048 aa21.09■□□□□ 0.97
RIPPLY3-201ENST00000329553 ZSCAN5DPP0CG00 497 aa21.09■□□□□ 0.97
RIPPLY3-201ENST00000329553 ETS1P14921 441 aa21.09■□□□□ 0.97
RIPPLY3-201ENST00000329553 ATF2P15336 505 aa21.09■□□□□ 0.97
RIPPLY3-201ENST00000329553 YTHDF3Q7Z739 585 aaKnown RBP21.09■□□□□ 0.97
RIPPLY3-201ENST00000329553 MICALL1Q8N3F8 863 aa21.09■□□□□ 0.97
RIPPLY3-201ENST00000329553 C10orf88Q9H8K7 445 aa21.09■□□□□ 0.97
RIPPLY3-201ENST00000329553 DMAP1Q9NPF5 467 aaPredicted RBP21.09■□□□□ 0.97
RIPPLY3-201ENST00000329553 MTRF1LQ9UGC7 380 aaKnown RBP21.09■□□□□ 0.97
RIPPLY3-201ENST00000329553 GGA2Q9UJY4 613 aa21.09■□□□□ 0.97
RIPPLY3-201ENST00000329553 NLRC5Q86WI3 1866 aa21.09■□□□□ 0.97
RIPPLY3-201ENST00000329553 APOC4-APOC2K7ER74 178 aa21.09■□□□□ 0.97
RIPPLY3-201ENST00000329553 APOC2P02655 101 aa21.09■□□□□ 0.97
RIPPLY3-201ENST00000329553 ALDH2P05091 517 aa21.09■□□□□ 0.97
RIPPLY3-201ENST00000329553 L1CAMP32004 1257 aa21.09■□□□□ 0.97
RIPPLY3-201ENST00000329553 EIF3BP55884 814 aaKnown RBP21.09■□□□□ 0.97
RIPPLY3-201ENST00000329553 PPP2R2AP63151 447 aa21.09■□□□□ 0.97
RIPPLY3-201ENST00000329553 ANKRD20A8PQ5CZ79 823 aa21.09■□□□□ 0.97
RIPPLY3-201ENST00000329553 PPP6R3Q5H9R7 873 aaPredicted RBP21.09■□□□□ 0.97
RIPPLY3-201ENST00000329553 FAM43BQ6ZT52 329 aaPredicted RBP21.09■□□□□ 0.97
RIPPLY3-201ENST00000329553 BHLHA9Q7RTU4 235 aa21.09■□□□□ 0.97
RIPPLY3-201ENST00000329553 BNIPLQ7Z465 357 aa21.09■□□□□ 0.97
RIPPLY3-201ENST00000329553 FAM131BQ86XD5 332 aa21.09■□□□□ 0.97
RIPPLY3-201ENST00000329553 ZNF333Q96JL9 665 aa21.09■□□□□ 0.97
RIPPLY3-201ENST00000329553 FRMD8P1Q9BZ68 369 aaPredicted RBP21.09■□□□□ 0.97
RIPPLY3-201ENST00000329553 M0QYT0 321 aa21.08■□□□□ 0.97
RIPPLY3-201ENST00000329553 LIG3P49916 1009 aa21.08■□□□□ 0.97
RIPPLY3-201ENST00000329553 ITGA8P53708 1063 aa21.08■□□□□ 0.97
RIPPLY3-201ENST00000329553 TFDP2Q14188 446 aa21.08■□□□□ 0.97
RIPPLY3-201ENST00000329553 DPYSL2Q16555 572 aa21.08■□□□□ 0.97
RIPPLY3-201ENST00000329553 NPNTQ6UXI9 565 aa21.08■□□□□ 0.97
RIPPLY3-201ENST00000329553 NPAS4Q8IUM7 802 aa21.08■□□□□ 0.97
RIPPLY3-201ENST00000329553 SPATA2LQ8IUW3 424 aaPredicted RBP21.08■□□□□ 0.97
RIPPLY3-201ENST00000329553 PQLC3Q8N755 202 aa21.08■□□□□ 0.97
RIPPLY3-201ENST00000329553 FAM129AQ9BZQ8 928 aa21.08■□□□□ 0.97
RIPPLY3-201ENST00000329553 DHX35Q9H5Z1 703 aaKnown RBP21.08■□□□□ 0.97
RIPPLY3-201ENST00000329553 MTMR10Q9NXD2 777 aa21.08■□□□□ 0.97
RIPPLY3-201ENST00000329553 ADAM28Q9UKQ2 775 aa21.08■□□□□ 0.97
RIPPLY3-201ENST00000329553 AP4E1Q9UPM8 1137 aa21.08■□□□□ 0.97
RIPPLY3-201ENST00000329553 PTPRDP23468 1912 aa21.08■□□□□ 0.97
RIPPLY3-201ENST00000329553 TANC1Q9C0D5 1861 aa21.08■□□□□ 0.96
RIPPLY3-201ENST00000329553 SYNJ2BP-COX16A0A087WUM0 186 aa21.08■□□□□ 0.96
RIPPLY3-201ENST00000329553 CYP2F1P24903 491 aa21.08■□□□□ 0.96
RIPPLY3-201ENST00000329553 SLC11A1P49279 550 aa21.08■□□□□ 0.96
RIPPLY3-201ENST00000329553 SLC39A12Q504Y0 691 aa21.08■□□□□ 0.96
RIPPLY3-201ENST00000329553 RHBDF2Q6PJF5 856 aa21.08■□□□□ 0.96
RIPPLY3-201ENST00000329553 MICALCLQ6ZW33 695 aa21.08■□□□□ 0.96
RIPPLY3-201ENST00000329553 PCDH19Q8TAB3 1148 aa21.08■□□□□ 0.96
RIPPLY3-201ENST00000329553 GPR62Q9BZJ7 368 aa21.08■□□□□ 0.96
RIPPLY3-201ENST00000329553 ZCWPW1Q9H0M4 648 aa21.08■□□□□ 0.96
RIPPLY3-201ENST00000329553 EPB41L4BQ9H329 900 aa21.08■□□□□ 0.96
RIPPLY3-201ENST00000329553 COX16Q9P0S2 106 aa21.08■□□□□ 0.96
RIPPLY3-201ENST00000329553 STAP1Q9ULZ2 295 aa21.08■□□□□ 0.96
RIPPLY3-201ENST00000329553 NOVA2Q9UNW9 492 aaKnown RBP21.08■□□□□ 0.96
RIPPLY3-201ENST00000329553 E7EVH7 732 aa21.07■□□□□ 0.96
RIPPLY3-201ENST00000329553 CAPN9O14815 690 aa21.07■□□□□ 0.96
RIPPLY3-201ENST00000329553 PARNO95453 639 aaKnown RBP21.07■□□□□ 0.96
RIPPLY3-201ENST00000329553 LTFP02788 710 aa21.07■□□□□ 0.96
RIPPLY3-201ENST00000329553 VARS2Q5ST30 1063 aaKnown RBP21.07■□□□□ 0.96
RIPPLY3-201ENST00000329553 FAM171A1Q5VUB5 890 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms