RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 RRP1BQ14684 758 aaKnown RBP11.78□□□□□ -0.52
COL4A5-201ENST00000328300 RNF135Q8IUD6 432 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.78□□□□□ -0.52
COL4A5-201ENST00000328300 SPATA20Q8TB22 786 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 GIMAP4Q9NUV9 329 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 PCDHGC5Q9Y5F6 944 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 RPS6KL1Q9Y6S9 549 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 AFDNP55196 1824 aaKnown RBP11.78□□□□□ -0.52
COL4A5-201ENST00000328300 TCP11X1B4DZS4 312 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 LTFP02788 710 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 SPATA31C1P0DKV0 1188 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 CKBP12277 381 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 IL1RL1Q01638 556 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 AMHR2Q16671 573 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 HP1BP3Q5SSJ5 553 aaPredicted RBP11.78□□□□□ -0.52
COL4A5-201ENST00000328300 FAM171A1Q5VUB5 890 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 L3MBTL3Q96JM7 780 aaPredicted RBP11.78□□□□□ -0.52
COL4A5-201ENST00000328300 SENP8Q96LD8 212 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 ZIM3Q96PE6 472 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 ADAM2Q99965 735 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 CDT1Q9H211 546 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 MANSC1Q9H8J5 431 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 ECT2Q9H8V3 914 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 AFF4Q9UHB7 1163 aaKnown RBP11.78□□□□□ -0.52
COL4A5-201ENST00000328300 VPS28Q9UK41 221 aa11.78□□□□□ -0.52
COL4A5-201ENST00000328300 A0A0G2JLL6 359 aaPredicted RBP11.77□□□□□ -0.52
COL4A5-201ENST00000328300 ANKRD65E5RJM6 399 aa11.77□□□□□ -0.52
COL4A5-201ENST00000328300 PRPF4O43172 522 aaKnown RBP eCLIP11.77□□□□□ -0.52
COL4A5-201ENST00000328300 GLI1P08151 1106 aa11.77□□□□□ -0.52
COL4A5-201ENST00000328300 SERPINF2P08697 491 aa11.77□□□□□ -0.52
COL4A5-201ENST00000328300 CAPRIN1Q14444 709 aaKnown RBP11.77□□□□□ -0.52
COL4A5-201ENST00000328300 SPANXN3Q5MJ09 141 aa11.77□□□□□ -0.52
COL4A5-201ENST00000328300 MARC1Q5VT66 337 aa11.77□□□□□ -0.52
COL4A5-201ENST00000328300 POLNQ7Z5Q5 900 aa11.77□□□□□ -0.52
COL4A5-201ENST00000328300 PRRT2Q7Z6L0 340 aaPredicted RBP11.77□□□□□ -0.52
COL4A5-201ENST00000328300 C4orf32Q8N8J7 132 aa11.77□□□□□ -0.52
COL4A5-201ENST00000328300 PRMT1Q99873 361 aaKnown RBP11.77□□□□□ -0.52
COL4A5-201ENST00000328300 STX18Q9P2W9 335 aaKnown RBP11.77□□□□□ -0.52
COL4A5-201ENST00000328300 DCTN4Q9UJW0 460 aa11.77□□□□□ -0.52
COL4A5-201ENST00000328300 ANKRD6Q9Y2G4 727 aa11.77□□□□□ -0.52
COL4A5-201ENST00000328300 RAMP2O60895 175 aa11.77□□□□□ -0.53
COL4A5-201ENST00000328300 E2F6O75461 281 aa11.77□□□□□ -0.53
COL4A5-201ENST00000328300 CDH2P19022 906 aaPredicted RBP11.77□□□□□ -0.53
COL4A5-201ENST00000328300 ANXA11P50995 505 aaKnown RBP11.77□□□□□ -0.53
COL4A5-201ENST00000328300 SLC22A9Q8IVM8 553 aa11.77□□□□□ -0.53
COL4A5-201ENST00000328300 ZCCHC2Q9C0B9 1178 aaKnown RBP11.77□□□□□ -0.53
COL4A5-201ENST00000328300 CYP4F11Q9HBI6 524 aa11.77□□□□□ -0.53
COL4A5-201ENST00000328300 LRP6O75581 1613 aa11.77□□□□□ -0.53
COL4A5-201ENST00000328300 TMEM120BA0PK00 339 aa11.77□□□□□ -0.53
COL4A5-201ENST00000328300 SRP72O76094 671 aaKnown RBP11.77□□□□□ -0.53
COL4A5-201ENST00000328300 PTPN1P18031 435 aaKnown RBP11.77□□□□□ -0.53
COL4A5-201ENST00000328300 CES1P23141 567 aa11.77□□□□□ -0.53
COL4A5-201ENST00000328300 PPP1R15BQ5SWA1 713 aa11.77□□□□□ -0.53
COL4A5-201ENST00000328300 RARS2Q5T160 578 aaKnown RBP11.77□□□□□ -0.53
COL4A5-201ENST00000328300 DENND5BQ6ZUT9 1274 aa11.77□□□□□ -0.53
COL4A5-201ENST00000328300 OOSP2Q86WS3 158 aa11.77□□□□□ -0.53
COL4A5-201ENST00000328300 SHC3Q92529 594 aa11.77□□□□□ -0.53
COL4A5-201ENST00000328300 RNF208Q9H0X6 261 aa11.77□□□□□ -0.53
COL4A5-201ENST00000328300 YDJCA8MPS7 323 aa11.77□□□□□ -0.53
COL4A5-201ENST00000328300 DDX3XO00571 662 aaKnown RBP eCLIP11.77□□□□□ -0.53
COL4A5-201ENST00000328300 DNALI1O14645 258 aaPredicted RBP11.77□□□□□ -0.53
COL4A5-201ENST00000328300 KITP10721 976 aa11.77□□□□□ -0.53
COL4A5-201ENST00000328300 CYP2A6P11509 494 aaPredicted RBP11.77□□□□□ -0.53
COL4A5-201ENST00000328300 ARMC6Q6NXE6 501 aa11.77□□□□□ -0.53
COL4A5-201ENST00000328300 PTF1AQ7RTS3 328 aa11.77□□□□□ -0.53
COL4A5-201ENST00000328300 MIB1Q86YT6 1006 aa11.77□□□□□ -0.53
COL4A5-201ENST00000328300 SLAIN1Q8ND83 568 aa11.77□□□□□ -0.53
COL4A5-201ENST00000328300 FBXO36Q8NEA4 188 aa11.77□□□□□ -0.53
COL4A5-201ENST00000328300 ETNK1Q9HBU6 452 aa11.77□□□□□ -0.53
COL4A5-201ENST00000328300 SMARCAL1Q9NZC9 954 aa11.77□□□□□ -0.53
COL4A5-201ENST00000328300 TMCO1Q9UM00 188 aa11.77□□□□□ -0.53
COL4A5-201ENST00000328300 OPLAHO14841 1288 aa11.77□□□□□ -0.53
COL4A5-201ENST00000328300 USP2O75604 605 aaPredicted RBP11.77□□□□□ -0.53
COL4A5-201ENST00000328300 PGAM1P18669 254 aa11.77□□□□□ -0.53
COL4A5-201ENST00000328300 ADIGQ0VDE8 80 aa11.77□□□□□ -0.53
COL4A5-201ENST00000328300 ZACNQ401N2 412 aa11.77□□□□□ -0.53
COL4A5-201ENST00000328300 SPRYD7Q5W111 196 aa11.77□□□□□ -0.53
COL4A5-201ENST00000328300 ZNF467Q7Z7K2 595 aaPredicted RBP11.77□□□□□ -0.53
COL4A5-201ENST00000328300 CARNMT1Q8N4J0 409 aa11.77□□□□□ -0.53
COL4A5-201ENST00000328300 OSCP1Q8WVF1 389 aa11.77□□□□□ -0.53
COL4A5-201ENST00000328300 WNT8BQ93098 351 aa11.77□□□□□ -0.53
COL4A5-201ENST00000328300 GPR20Q99678 358 aa11.77□□□□□ -0.53
COL4A5-201ENST00000328300 RBBP8Q99708 897 aa11.77□□□□□ -0.53
COL4A5-201ENST00000328300 PACSIN1Q9BY11 444 aa11.77□□□□□ -0.53
COL4A5-201ENST00000328300 TRIM49D1C9J1S8 452 aa11.76□□□□□ -0.53
COL4A5-201ENST00000328300 PQBP1O60828 265 aaKnown RBP11.76□□□□□ -0.53
COL4A5-201ENST00000328300 INPP1P49441 399 aa11.76□□□□□ -0.53
COL4A5-201ENST00000328300 SH3D19Q5HYK7 790 aa11.76□□□□□ -0.53
COL4A5-201ENST00000328300 MYO1HQ8N1T3 1032 aa11.76□□□□□ -0.53
COL4A5-201ENST00000328300 DDI1Q8WTU0 396 aa11.76□□□□□ -0.53
COL4A5-201ENST00000328300 ZNF510Q9Y2H8 683 aa11.76□□□□□ -0.53
COL4A5-201ENST00000328300 SOX10P56693 466 aa11.76□□□□□ -0.53
COL4A5-201ENST00000328300 SLC29A2Q14542 456 aa11.76□□□□□ -0.53
COL4A5-201ENST00000328300 NOMO2Q5JPE7 1267 aa11.76□□□□□ -0.53
COL4A5-201ENST00000328300 PPM1LQ5SGD2 360 aa11.76□□□□□ -0.53
COL4A5-201ENST00000328300 ERAP2Q6P179 960 aa11.76□□□□□ -0.53
COL4A5-201ENST00000328300 NOA1Q8NC60 698 aaKnown RBP11.76□□□□□ -0.53
COL4A5-201ENST00000328300 TTLL13PA6NNM8 815 aa11.76□□□□□ -0.53
COL4A5-201ENST00000328300 C2CD2LO14523 706 aa11.76□□□□□ -0.53
COL4A5-201ENST00000328300 CHRM3P20309 590 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms