RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 NDUFAF2Q8N183 169 aa13.23□□□□□ -0.29
CCDC60-201ENST00000327554 NIPA2Q8N8Q9 360 aa13.23□□□□□ -0.29
CCDC60-201ENST00000327554 APBB2Q92870 758 aa13.23□□□□□ -0.29
CCDC60-201ENST00000327554 CMTM5Q96DZ9 223 aa13.23□□□□□ -0.29
CCDC60-201ENST00000327554 YIPF2Q9BWQ6 316 aa13.23□□□□□ -0.29
CCDC60-201ENST00000327554 ZNHIT2Q9UHR6 403 aa13.23□□□□□ -0.29
CCDC60-201ENST00000327554 GNEQ9Y223 722 aaKnown RBP13.23□□□□□ -0.29
CCDC60-201ENST00000327554 DHX15O43143 795 aaKnown RBP13.22□□□□□ -0.29
CCDC60-201ENST00000327554 RPS6KA4O75676 772 aa13.22□□□□□ -0.29
CCDC60-201ENST00000327554 ZNF189O75820 626 aaPredicted RBP13.22□□□□□ -0.29
CCDC60-201ENST00000327554 VNN1O95497 513 aa13.22□□□□□ -0.29
CCDC60-201ENST00000327554 CSH1P0DML2 217 aa13.22□□□□□ -0.29
CCDC60-201ENST00000327554 CSH2P0DML3 217 aa13.22□□□□□ -0.29
CCDC60-201ENST00000327554 FGF3P11487 239 aaPredicted RBP13.22□□□□□ -0.29
CCDC60-201ENST00000327554 ITGB5P18084 799 aa13.22□□□□□ -0.29
CCDC60-201ENST00000327554 ACAT1P24752 427 aaKnown RBP13.22□□□□□ -0.29
CCDC60-201ENST00000327554 WNT7BP56706 349 aa13.22□□□□□ -0.29
CCDC60-201ENST00000327554 SLC25A11Q02978 314 aaKnown RBP13.22□□□□□ -0.29
CCDC60-201ENST00000327554 ENPEPQ07075 957 aa13.22□□□□□ -0.29
CCDC60-201ENST00000327554 BTG3Q14201 252 aaPredicted RBP13.22□□□□□ -0.29
CCDC60-201ENST00000327554 LTBP1Q14766 1721 aa13.22□□□□□ -0.29
CCDC60-201ENST00000327554 FASTKD1Q53R41 847 aaKnown RBP13.22□□□□□ -0.29
CCDC60-201ENST00000327554 RARS2Q5T160 578 aaKnown RBP13.22□□□□□ -0.29
CCDC60-201ENST00000327554 FAM102BQ5T8I3 360 aa13.22□□□□□ -0.29
CCDC60-201ENST00000327554 TDRD10Q5VZ19 366 aaKnown RBP13.22□□□□□ -0.29
CCDC60-201ENST00000327554 PDPK2PQ6A1A2 396 aa13.22□□□□□ -0.29
CCDC60-201ENST00000327554 PHTF2Q8N3S3 785 aa13.22□□□□□ -0.29
CCDC60-201ENST00000327554 KCNK16Q96T55 309 aa13.22□□□□□ -0.29
CCDC60-201ENST00000327554 FAM213AQ9BRX8 229 aa13.22□□□□□ -0.29
CCDC60-201ENST00000327554 DHX33Q9H6R0 707 aaKnown RBP13.22□□□□□ -0.29
CCDC60-201ENST00000327554 POPDC2Q9HBU9 364 aa13.22□□□□□ -0.29
CCDC60-201ENST00000327554 XPNPEP1Q9NQW7 623 aa13.22□□□□□ -0.29
CCDC60-201ENST00000327554 RSL24D1Q9UHA3 163 aaKnown RBP13.22□□□□□ -0.29
CCDC60-201ENST00000327554 BARX2Q9UMQ3 279 aaPredicted RBP13.22□□□□□ -0.29
CCDC60-201ENST00000327554 CNTN6Q9UQ52 1028 aa13.22□□□□□ -0.29
CCDC60-201ENST00000327554 ZNF711Q9Y462 761 aa13.22□□□□□ -0.29
CCDC60-201ENST00000327554 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.22□□□□□ -0.29
CCDC60-201ENST00000327554 LOC100653049A0A140TA62 436 aa13.22□□□□□ -0.29
CCDC60-201ENST00000327554 KANSL1LA0AUZ9 987 aa13.22□□□□□ -0.29
CCDC60-201ENST00000327554 KRT34O76011 436 aa13.22□□□□□ -0.29
CCDC60-201ENST00000327554 LYPLA2O95372 231 aa13.22□□□□□ -0.29
CCDC60-201ENST00000327554 GDF11O95390 407 aa13.22□□□□□ -0.29
CCDC60-201ENST00000327554 C4BPAP04003 597 aaKnown RBP13.22□□□□□ -0.29
CCDC60-201ENST00000327554 IL1R2P27930 398 aa13.22□□□□□ -0.29
CCDC60-201ENST00000327554 YWHABP31946 246 aaKnown RBP13.22□□□□□ -0.29
CCDC60-201ENST00000327554 QARSP47897 775 aaKnown RBP13.22□□□□□ -0.29
CCDC60-201ENST00000327554 EIF3EP60228 445 aaKnown RBP13.22□□□□□ -0.29
CCDC60-201ENST00000327554 CLDN10P78369 228 aa13.22□□□□□ -0.29
CCDC60-201ENST00000327554 KCNT1Q5JUK3 1230 aa13.22□□□□□ -0.29
CCDC60-201ENST00000327554 FAM182AQ5T1J6 154 aa13.22□□□□□ -0.29
CCDC60-201ENST00000327554 LGSNQ5TDP6 509 aa13.22□□□□□ -0.29
CCDC60-201ENST00000327554 APOBEC3HQ6NTF7 200 aaKnown RBP13.22□□□□□ -0.29
CCDC60-201ENST00000327554 AMIGO3Q86WK7 504 aa13.22□□□□□ -0.29
CCDC60-201ENST00000327554 TMEM126BQ8IUX1 230 aa13.22□□□□□ -0.29
CCDC60-201ENST00000327554 MXRA8Q9BRK3 442 aa13.22□□□□□ -0.29
CCDC60-201ENST00000327554 CDCA7Q9BWT1 371 aaPredicted RBP13.22□□□□□ -0.29
CCDC60-201ENST00000327554 LIN28AQ9H9Z2 209 aaKnown RBP13.22□□□□□ -0.29
CCDC60-201ENST00000327554 DNAJC28Q9NX36 388 aa13.22□□□□□ -0.29
CCDC60-201ENST00000327554 ZBTB21Q9ULJ3 1066 aa13.22□□□□□ -0.29
CCDC60-201ENST00000327554 PTPRJQ12913 1337 aa13.22□□□□□ -0.29
CCDC60-201ENST00000327554 DDTLA6NHG4 134 aaPredicted RBP13.21□□□□□ -0.29
CCDC60-201ENST00000327554 ZNF195O14628 629 aa13.21□□□□□ -0.29
CCDC60-201ENST00000327554 CALB1P05937 261 aa13.21□□□□□ -0.29
CCDC60-201ENST00000327554 IDO1P14902 403 aa13.21□□□□□ -0.29
CCDC60-201ENST00000327554 PORP16435 677 aaPredicted RBP13.21□□□□□ -0.29
CCDC60-201ENST00000327554 KDELR1P24390 212 aa13.21□□□□□ -0.29
CCDC60-201ENST00000327554 SLC1A6P48664 564 aa13.21□□□□□ -0.29
CCDC60-201ENST00000327554 CDK9P50750 372 aaKnown RBP13.21□□□□□ -0.29
CCDC60-201ENST00000327554 UGCGQ16739 394 aa13.21□□□□□ -0.29
CCDC60-201ENST00000327554 TATDN1Q6P1N9 297 aa13.21□□□□□ -0.29
CCDC60-201ENST00000327554 POTEHQ6S545 545 aa13.21□□□□□ -0.29
CCDC60-201ENST00000327554 POTEAQ6S8J7 498 aa13.21□□□□□ -0.29
CCDC60-201ENST00000327554 TMEM179Q6ZVK1 233 aa13.21□□□□□ -0.29
CCDC60-201ENST00000327554 PATL1Q86TB9 770 aaKnown RBP13.21□□□□□ -0.29
CCDC60-201ENST00000327554 CROCCP3Q8IVE0 287 aa13.21□□□□□ -0.29
CCDC60-201ENST00000327554 LILRA2Q8N149 483 aa13.21□□□□□ -0.29
CCDC60-201ENST00000327554 ARFGAP1Q8N6T3 406 aa13.21□□□□□ -0.29
CCDC60-201ENST00000327554 ADCY4Q8NFM4 1077 aa13.21□□□□□ -0.29
CCDC60-201ENST00000327554 ZNF606Q8WXB4 792 aa13.21□□□□□ -0.29
CCDC60-201ENST00000327554 BSNDQ8WZ55 320 aa13.21□□□□□ -0.29
CCDC60-201ENST00000327554 PNPOQ9NVS9 261 aa13.21□□□□□ -0.29
CCDC60-201ENST00000327554 PACSIN3Q9UKS6 424 aa13.21□□□□□ -0.29
CCDC60-201ENST00000327554 DKC1O60832 514 aaKnown RBP eCLIP13.21□□□□□ -0.29
CCDC60-201ENST00000327554 KRT38O76015 456 aa13.21□□□□□ -0.29
CCDC60-201ENST00000327554 CAPNS1P04632 268 aa13.21□□□□□ -0.29
CCDC60-201ENST00000327554 THRAP10827 490 aa13.21□□□□□ -0.29
CCDC60-201ENST00000327554 MYL4P12829 197 aa13.21□□□□□ -0.29
CCDC60-201ENST00000327554 COX4I1P13073 169 aa13.21□□□□□ -0.29
CCDC60-201ENST00000327554 ALOX15P16050 662 aaPredicted RBP13.21□□□□□ -0.29
CCDC60-201ENST00000327554 STT3AP46977 705 aa13.21□□□□□ -0.29
CCDC60-201ENST00000327554 ALDH3B2P48448 385 aa13.21□□□□□ -0.29
CCDC60-201ENST00000327554 RPL10AP62906 217 aaKnown RBP13.21□□□□□ -0.29
CCDC60-201ENST00000327554 JAG1P78504 1218 aa13.21□□□□□ -0.29
CCDC60-201ENST00000327554 VWA5B1Q5TIE3 1220 aa13.21□□□□□ -0.29
CCDC60-201ENST00000327554 CATSPER1Q8NEC5 780 aa13.21□□□□□ -0.29
CCDC60-201ENST00000327554 PPP1R14CQ8TAE6 165 aa13.21□□□□□ -0.29
CCDC60-201ENST00000327554 TMIGD2Q96BF3 282 aa13.21□□□□□ -0.29
CCDC60-201ENST00000327554 LRGUKQ96M69 825 aa13.21□□□□□ -0.29
CCDC60-201ENST00000327554 BIRC8Q96P09 236 aa13.21□□□□□ -0.29
CCDC60-201ENST00000327554 CSRNP1Q96S65 589 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms