RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-223ENST00000324771 MMP3P08254 477 aa12.23□□□□□ -0.45
DDR1-223ENST00000324771 OR4Q2P0C623 313 aa12.23□□□□□ -0.45
DDR1-223ENST00000324771 GOT1P17174 413 aa12.23□□□□□ -0.45
DDR1-223ENST00000324771 MGAT1P26572 445 aa12.23□□□□□ -0.45
DDR1-223ENST00000324771 YWHAHQ04917 246 aaPredicted RBP12.23□□□□□ -0.45
DDR1-223ENST00000324771 DPYSL3Q14195 570 aa12.23□□□□□ -0.45
DDR1-223ENST00000324771 FAM171A1Q5VUB5 890 aa12.23□□□□□ -0.45
DDR1-223ENST00000324771 PRRT2Q7Z6L0 340 aaPredicted RBP12.23□□□□□ -0.45
DDR1-223ENST00000324771 RNF39Q9H2S5 420 aa12.23□□□□□ -0.45
DDR1-223ENST00000324771 ST6GALNAC4Q9H4F1 302 aa12.23□□□□□ -0.45
DDR1-223ENST00000324771 SMIM28A0A1B0GU29 152 aa12.23□□□□□ -0.45
DDR1-223ENST00000324771 WDR27A2RRH5 827 aa12.23□□□□□ -0.45
DDR1-223ENST00000324771 MANSC4A6NHS7 340 aaPredicted RBP12.23□□□□□ -0.45
DDR1-223ENST00000324771 SPECC1L-ADORA2AF8WAN1 911 aa12.23□□□□□ -0.45
DDR1-223ENST00000324771 CES2O00748 559 aa12.23□□□□□ -0.45
DDR1-223ENST00000324771 BUD23O43709 281 aaKnown RBP12.23□□□□□ -0.45
DDR1-223ENST00000324771 LRCH4O75427 683 aa12.23□□□□□ -0.45
DDR1-223ENST00000324771 PAMP19021 973 aa12.23□□□□□ -0.45
DDR1-223ENST00000324771 RPL10AP62906 217 aaKnown RBP12.23□□□□□ -0.45
DDR1-223ENST00000324771 PDK2Q15119 407 aa12.23□□□□□ -0.45
DDR1-223ENST00000324771 RBBP5Q15291 538 aaKnown RBP12.23□□□□□ -0.45
DDR1-223ENST00000324771 C16orf46Q6P387 395 aa12.23□□□□□ -0.45
DDR1-223ENST00000324771 ZNF410Q86VK4 478 aa12.23□□□□□ -0.45
DDR1-223ENST00000324771 MAML3Q96JK9 1138 aa12.23□□□□□ -0.45
DDR1-223ENST00000324771 FAM129AQ9BZQ8 928 aa12.23□□□□□ -0.45
DDR1-223ENST00000324771 CHST12Q9NRB3 414 aa12.23□□□□□ -0.45
DDR1-223ENST00000324771 CITO14578 2027 aa12.23□□□□□ -0.45
DDR1-223ENST00000324771 CRYBG1Q9Y4K1 1723 aa12.22□□□□□ -0.45
DDR1-223ENST00000324771 SLC12A8A0AV02 714 aa12.22□□□□□ -0.45
DDR1-223ENST00000324771 BTNL10A8MVZ5 291 aa12.22□□□□□ -0.45
DDR1-223ENST00000324771 TULP2O00295 520 aa12.22□□□□□ -0.45
DDR1-223ENST00000324771 OPHN1O60890 802 aa12.22□□□□□ -0.45
DDR1-223ENST00000324771 PDHA1P08559 390 aa12.22□□□□□ -0.45
DDR1-223ENST00000324771 LMO2P25791 158 aa12.22□□□□□ -0.45
DDR1-223ENST00000324771 WNT7BP56706 349 aa12.22□□□□□ -0.45
DDR1-223ENST00000324771 KIF19Q2TAC6 998 aa12.22□□□□□ -0.45
DDR1-223ENST00000324771 GRAMD1BQ3KR37 738 aa12.22□□□□□ -0.45
DDR1-223ENST00000324771 DCAF12L1Q5VU92 463 aa12.22□□□□□ -0.45
DDR1-223ENST00000324771 C1orf146Q5VVC0 180 aa12.22□□□□□ -0.45
DDR1-223ENST00000324771 GIPC2Q8TF65 315 aa12.22□□□□□ -0.45
DDR1-223ENST00000324771 ELMO2Q96JJ3 720 aa12.22□□□□□ -0.45
DDR1-223ENST00000324771 SLCO1B3Q9NPD5 702 aa12.22□□□□□ -0.45
DDR1-223ENST00000324771 IL1RAPL1Q9NZN1 696 aa12.22□□□□□ -0.45
DDR1-223ENST00000324771 PCYOX1Q9UHG3 505 aa12.22□□□□□ -0.45
DDR1-223ENST00000324771 RNF103O00237 685 aa12.22□□□□□ -0.45
DDR1-223ENST00000324771 ICAM3P32942 547 aa12.22□□□□□ -0.45
DDR1-223ENST00000324771 RAD23BP54727 409 aa12.22□□□□□ -0.45
DDR1-223ENST00000324771 CORO7P57737 925 aa12.22□□□□□ -0.45
DDR1-223ENST00000324771 SNX17Q15036 470 aa12.22□□□□□ -0.45
DDR1-223ENST00000324771 SLC39A12Q504Y0 691 aa12.22□□□□□ -0.45
DDR1-223ENST00000324771 HSP90AA5PQ58FG0 334 aa12.22□□□□□ -0.45
DDR1-223ENST00000324771 TAF2Q6P1X5 1199 aa12.22□□□□□ -0.45
DDR1-223ENST00000324771 KLC3Q6P597 504 aa12.22□□□□□ -0.45
DDR1-223ENST00000324771 ZC3H15Q8WU90 426 aaKnown RBP12.22□□□□□ -0.45
DDR1-223ENST00000324771 E2F7Q96AV8 911 aa12.22□□□□□ -0.45
DDR1-223ENST00000324771 FIZ1Q96SL8 496 aa12.22□□□□□ -0.45
DDR1-223ENST00000324771 TBCBQ99426 244 aa12.22□□□□□ -0.45
DDR1-223ENST00000324771 TKTL2Q9H0I9 626 aa12.22□□□□□ -0.45
DDR1-223ENST00000324771 CYP4F12Q9HCS2 524 aa12.22□□□□□ -0.45
DDR1-223ENST00000324771 HEY2Q9UBP5 337 aa12.22□□□□□ -0.45
DDR1-223ENST00000324771 PCDHB7Q9Y5E2 793 aa12.22□□□□□ -0.45
DDR1-223ENST00000324771 USH1CQ9Y6N9 552 aa12.22□□□□□ -0.45
DDR1-223ENST00000324771 RPTORQ8N122 1335 aa12.22□□□□□ -0.45
DDR1-223ENST00000324771 CEP290O15078 2479 aa12.22□□□□□ -0.45
DDR1-223ENST00000324771 hCG_1818297A0A087WSY0 165 aa12.22□□□□□ -0.45
DDR1-223ENST00000324771 YBX3P16989 372 aaKnown RBP eCLIP12.22□□□□□ -0.454e-7■□□□□ 9.7
DDR1-223ENST00000324771 ALDH7A1P49419 539 aaKnown RBP12.22□□□□□ -0.45
DDR1-223ENST00000324771 CCL23P55773 120 aa12.22□□□□□ -0.45
DDR1-223ENST00000324771 MBTD1Q05BQ5 628 aa12.22□□□□□ -0.45
DDR1-223ENST00000324771 RAB44Q7Z6P3 723 aaPredicted RBP12.22□□□□□ -0.45
DDR1-223ENST00000324771 B3GALNT2Q8NCR0 500 aa12.22□□□□□ -0.45
DDR1-223ENST00000324771 PPTC7Q8NI37 304 aa12.22□□□□□ -0.45
DDR1-223ENST00000324771 TTC8Q8TAM2 541 aa12.22□□□□□ -0.45
DDR1-223ENST00000324771 LRRC19Q9H756 370 aa12.22□□□□□ -0.45
DDR1-223ENST00000324771 IARS2Q9NSE4 1012 aaKnown RBP12.22□□□□□ -0.45
DDR1-223ENST00000324771 WDR70Q9NW82 654 aa12.22□□□□□ -0.45
DDR1-223ENST00000324771 ZC3H4Q9UPT8 1303 aaKnown RBP12.22□□□□□ -0.45
DDR1-223ENST00000324771 APOC4-APOC2K7ER74 178 aa12.22□□□□□ -0.45
DDR1-223ENST00000324771 APOC2P02655 101 aa12.22□□□□□ -0.45
DDR1-223ENST00000324771 STX1BP61266 288 aa12.22□□□□□ -0.45
DDR1-223ENST00000324771 GBE1Q04446 702 aa12.22□□□□□ -0.45
DDR1-223ENST00000324771 PTK6Q13882 451 aa12.22□□□□□ -0.45
DDR1-223ENST00000324771 MON1BQ7L1V2 547 aa12.22□□□□□ -0.45
DDR1-223ENST00000324771 PARP9Q8IXQ6 854 aa12.22□□□□□ -0.45
DDR1-223ENST00000324771 CRYGNQ8WXF5 182 aa12.22□□□□□ -0.45
DDR1-223ENST00000324771 RBM22Q9NW64 420 aaKnown RBP eCLIP12.22□□□□□ -0.452e-7■■■□□ 16.7
DDR1-223ENST00000324771 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.22□□□□□ -0.45
DDR1-223ENST00000324771 C4BP0C0L5 1744 aa12.21□□□□□ -0.45
DDR1-223ENST00000324771 TSPAN1O60635 241 aa12.21□□□□□ -0.45
DDR1-223ENST00000324771 PRKAR2AP13861 404 aaKnown RBP12.21□□□□□ -0.45
DDR1-223ENST00000324771 SATB1Q01826 763 aa12.21□□□□□ -0.45
DDR1-223ENST00000324771 EFTUD2Q15029 972 aaKnown RBP eCLIP12.21□□□□□ -0.454e-6■■■■□ 22.5
DDR1-223ENST00000324771 DCP1BQ8IZD4 617 aaKnown RBP12.21□□□□□ -0.45
DDR1-223ENST00000324771 CLEC4CQ8WTT0 213 aa12.21□□□□□ -0.45
DDR1-223ENST00000324771 HTR3CQ8WXA8 447 aa12.21□□□□□ -0.45
DDR1-223ENST00000324771 TRIM56Q9BRZ2 755 aaKnown RBP12.21□□□□□ -0.45
DDR1-223ENST00000324771 FOXP3Q9BZS1 431 aa12.21□□□□□ -0.45
DDR1-223ENST00000324771 ZCWPW1Q9H0M4 648 aa12.21□□□□□ -0.45
DDR1-223ENST00000324771 MUC3BQ9H195 1237 aa12.21□□□□□ -0.45
DDR1-223ENST00000324771 PRDM12Q9H4Q4 367 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms