RNA–Protein interactions for RNA: ENST00000323374.8

SPHK1-201, Transcript of sphingosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene SPHK1, Length 2,138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-201ENST00000323374 MLH1P40692 756 aa22.58■■□□□ 1.2
SPHK1-201ENST00000323374 ELK3P41970 407 aa22.58■■□□□ 1.2
SPHK1-201ENST00000323374 XRCC4Q13426 336 aa22.58■■□□□ 1.2
SPHK1-201ENST00000323374 NUGGCQ68CJ6 796 aa22.58■■□□□ 1.2
SPHK1-201ENST00000323374 C4orf22Q6V702 233 aa22.58■■□□□ 1.2
SPHK1-201ENST00000323374 KCTD13Q8WZ19 329 aa22.58■■□□□ 1.2
SPHK1-201ENST00000323374 TGS1Q96RS0 853 aaKnown RBP22.58■■□□□ 1.2
SPHK1-201ENST00000323374 FGFR1OP2Q9NVK5 253 aa22.58■■□□□ 1.2
SPHK1-201ENST00000323374 TRPM7Q96QT4 1865 aa22.57■■□□□ 1.2
SPHK1-201ENST00000323374 MEIS3P2A8K0S8 358 aa22.57■■□□□ 1.2
SPHK1-201ENST00000323374 SNX3O60493 162 aa22.57■■□□□ 1.2
SPHK1-201ENST00000323374 SPAG7O75391 227 aa22.57■■□□□ 1.2
SPHK1-201ENST00000323374 DAB1O75553 588 aa22.57■■□□□ 1.2
SPHK1-201ENST00000323374 SULT1E1P49888 294 aa22.57■■□□□ 1.2
SPHK1-201ENST00000323374 MRPS5P82675 430 aaKnown RBP22.57■■□□□ 1.2
SPHK1-201ENST00000323374 CBLBQ13191 982 aa22.57■■□□□ 1.2
SPHK1-201ENST00000323374 GDF6Q6KF10 455 aaPredicted RBP22.57■■□□□ 1.2
SPHK1-201ENST00000323374 ADGRD1Q6QNK2 874 aa22.57■■□□□ 1.2
SPHK1-201ENST00000323374 CSPG4P5Q96PW8 444 aa22.57■■□□□ 1.2
SPHK1-201ENST00000323374 PAFAH2Q99487 392 aa22.57■■□□□ 1.2
SPHK1-201ENST00000323374 MED10Q9BTT4 135 aa22.57■■□□□ 1.2
SPHK1-201ENST00000323374 DHRS4Q9BTZ2 278 aa22.57■■□□□ 1.2
SPHK1-201ENST00000323374 KDM4CQ9H3R0 1056 aa22.57■■□□□ 1.2
SPHK1-201ENST00000323374 ACTR5Q9H9F9 607 aaPredicted RBP22.57■■□□□ 1.2
SPHK1-201ENST00000323374 SPC25Q9HBM1 224 aa22.57■■□□□ 1.2
SPHK1-201ENST00000323374 LRRC4Q9HBW1 653 aa22.57■■□□□ 1.2
SPHK1-201ENST00000323374 THP07101 528 aa22.57■■□□□ 1.2
SPHK1-201ENST00000323374 CYBAP13498 195 aa22.57■■□□□ 1.2
SPHK1-201ENST00000323374 YWHAZP63104 245 aaKnown RBP22.57■■□□□ 1.2
SPHK1-201ENST00000323374 EFTUD2Q15029 972 aaKnown RBP eCLIP22.57■■□□□ 1.22e-8■■■■□ 21.1
SPHK1-201ENST00000323374 MFSD14CQ5VZR4 134 aa22.57■■□□□ 1.2
SPHK1-201ENST00000323374 PAQR9Q6ZVX9 377 aa22.57■■□□□ 1.2
SPHK1-201ENST00000323374 GSTCDQ8NEC7 633 aa22.57■■□□□ 1.2
SPHK1-201ENST00000323374 CCT6BQ92526 530 aa22.57■■□□□ 1.2
SPHK1-201ENST00000323374 SENP8Q96LD8 212 aa22.57■■□□□ 1.2
SPHK1-201ENST00000323374 GAD1Q99259 594 aa22.57■■□□□ 1.2
SPHK1-201ENST00000323374 KIF9Q9HAQ2 790 aa22.57■■□□□ 1.2
SPHK1-201ENST00000323374 ETNK2Q9NVF9 386 aa22.57■■□□□ 1.2
SPHK1-201ENST00000323374 DDX43Q9NXZ2 648 aaKnown RBP22.57■■□□□ 1.2
SPHK1-201ENST00000323374 TEX264Q9Y6I9 313 aa22.57■■□□□ 1.2
SPHK1-201ENST00000323374 CAPN7Q9Y6W3 813 aa22.57■■□□□ 1.2
SPHK1-201ENST00000323374 CCT8L1PA6NM43 557 aa22.56■■□□□ 1.2
SPHK1-201ENST00000323374 BEST1O76090 585 aa22.56■■□□□ 1.2
SPHK1-201ENST00000323374 PGK1P00558 417 aa22.56■■□□□ 1.2
SPHK1-201ENST00000323374 CTSHP09668 335 aa22.56■■□□□ 1.2
SPHK1-201ENST00000323374 MSH2P43246 934 aa22.56■■□□□ 1.2
SPHK1-201ENST00000323374 GBE1Q04446 702 aa22.56■■□□□ 1.2
SPHK1-201ENST00000323374 ACTN3Q08043 901 aaPredicted RBP22.56■■□□□ 1.2
SPHK1-201ENST00000323374 SLC45A4Q5BKX6 768 aa22.56■■□□□ 1.2
SPHK1-201ENST00000323374 MDH1BQ5I0G3 518 aa22.56■■□□□ 1.2
SPHK1-201ENST00000323374 SYCP2LQ5T4T6 812 aa22.56■■□□□ 1.2
SPHK1-201ENST00000323374 C4orf33Q8N1A6 199 aa22.56■■□□□ 1.2
SPHK1-201ENST00000323374 CYTH2Q99418 400 aa22.56■■□□□ 1.2
SPHK1-201ENST00000323374 MAGEB5Q9BZ81 275 aa22.56■■□□□ 1.2
SPHK1-201ENST00000323374 SENP6Q9GZR1 1112 aaPredicted RBP22.56■■□□□ 1.2
SPHK1-201ENST00000323374 SPAG6O75602 509 aa22.55■■□□□ 1.2
SPHK1-201ENST00000323374 NOS2P35228 1153 aa22.55■■□□□ 1.2
SPHK1-201ENST00000323374 ARL4AP40617 200 aa22.55■■□□□ 1.2
SPHK1-201ENST00000323374 WDR4P57081 412 aaKnown RBP22.55■■□□□ 1.2
SPHK1-201ENST00000323374 SREBF2Q12772 1141 aa22.55■■□□□ 1.2
SPHK1-201ENST00000323374 LACTB2Q53H82 288 aaPredicted RBP22.55■■□□□ 1.2
SPHK1-201ENST00000323374 DCAF6Q58WW2 860 aa22.55■■□□□ 1.2
SPHK1-201ENST00000323374 CLEC20AQ6ZU45 233 aa22.55■■□□□ 1.2
SPHK1-201ENST00000323374 FAM131BQ86XD5 332 aa22.55■■□□□ 1.2
SPHK1-201ENST00000323374 PSTKQ8IV42 348 aaKnown RBP22.55■■□□□ 1.2
SPHK1-201ENST00000323374 IGDCC3Q8IVU1 814 aa22.55■■□□□ 1.2
SPHK1-201ENST00000323374 SIX6OS1Q8N1H7 587 aa22.55■■□□□ 1.2
SPHK1-201ENST00000323374 TMEM86AQ8N2M4 240 aa22.55■■□□□ 1.2
SPHK1-201ENST00000323374 DENND1AQ8TEH3 1009 aa22.55■■□□□ 1.2
SPHK1-201ENST00000323374 NDRG1Q92597 394 aaKnown RBP22.55■■□□□ 1.2
SPHK1-201ENST00000323374 PAIP2Q9BPZ3 127 aaKnown RBP22.55■■□□□ 1.2
SPHK1-201ENST00000323374 RCOR3Q9P2K3 495 aaPredicted RBP22.55■■□□□ 1.2
SPHK1-201ENST00000323374 FZD10Q9ULW2 581 aa22.55■■□□□ 1.2
SPHK1-201ENST00000323374 ASMTLO95671 621 aa22.55■■□□□ 1.2
SPHK1-201ENST00000323374 CHRNA1P02708 482 aa22.55■■□□□ 1.2
SPHK1-201ENST00000323374 FAM200BP0CF97 657 aa22.55■■□□□ 1.2
SPHK1-201ENST00000323374 IGFBP6P24592 240 aaPredicted RBP22.55■■□□□ 1.2
SPHK1-201ENST00000323374 MAGEA6P43360 314 aa22.55■■□□□ 1.2
SPHK1-201ENST00000323374 LHX1P48742 406 aa22.55■■□□□ 1.2
SPHK1-201ENST00000323374 SF3A3Q12874 501 aaKnown RBP eCLIP22.55■■□□□ 1.25e-7■□□□□ 11
SPHK1-201ENST00000323374 SLC10A2Q12908 348 aaPredicted RBP22.55■■□□□ 1.2
SPHK1-201ENST00000323374 CCDC110Q8TBZ0 833 aa22.55■■□□□ 1.2
SPHK1-201ENST00000323374 WNT8BQ93098 351 aa22.55■■□□□ 1.2
SPHK1-201ENST00000323374 UPF3AQ9H1J1 476 aaKnown RBP22.55■■□□□ 1.2
SPHK1-201ENST00000323374 SSU72Q9NP77 194 aaKnown RBP22.55■■□□□ 1.2
SPHK1-201ENST00000323374 STAP1Q9ULZ2 295 aa22.55■■□□□ 1.2
SPHK1-201ENST00000323374 USP15Q9Y4E8 981 aaPredicted RBP22.55■■□□□ 1.2
SPHK1-201ENST00000323374 A0A1W2PPM1 405 aa22.54■■□□□ 1.2
SPHK1-201ENST00000323374 OAS1P00973 400 aaKnown RBP22.54■■□□□ 1.2
SPHK1-201ENST00000323374 GBP2P32456 591 aaPredicted RBP22.54■■□□□ 1.2
SPHK1-201ENST00000323374 SPARCL1Q14515 664 aa22.54■■□□□ 1.2
SPHK1-201ENST00000323374 KIAA0319Q5VV43 1072 aa22.54■■□□□ 1.2
SPHK1-201ENST00000323374 SERINC5Q86VE9 423 aa22.54■■□□□ 1.2
SPHK1-201ENST00000323374 PRDM16Q9HAZ2 1276 aa22.54■■□□□ 1.2
SPHK1-201ENST00000323374 ETNK1Q9HBU6 452 aa22.54■■□□□ 1.2
SPHK1-201ENST00000323374 CACNG4Q9UBN1 327 aa22.54■■□□□ 1.2
SPHK1-201ENST00000323374 GIT1Q9Y2X7 761 aa22.54■■□□□ 1.2
SPHK1-201ENST00000323374 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.54■■□□□ 1.2
SPHK1-201ENST00000323374 KBTBD13C9JR72 458 aa22.54■■□□□ 1.2
SPHK1-201ENST00000323374 GPR182O15218 404 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 267 ms