RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 TBCBQ99426 244 aa11.38□□□□□ -0.59
TOP3A-201ENST00000321105 NCAPGQ9BPX3 1015 aa11.38□□□□□ -0.59
TOP3A-201ENST00000321105 TASP1Q9H6P5 420 aa11.38□□□□□ -0.59
TOP3A-201ENST00000321105 TXLNGQ9NUQ3 528 aa11.38□□□□□ -0.59
TOP3A-201ENST00000321105 PCYOX1Q9UHG3 505 aa11.38□□□□□ -0.59
TOP3A-201ENST00000321105 HAO1Q9UJM8 370 aa11.38□□□□□ -0.59
TOP3A-201ENST00000321105 KIAA1257Q9ULG3 409 aa11.38□□□□□ -0.59
TOP3A-201ENST00000321105 PHTF1Q9UMS5 762 aa11.38□□□□□ -0.59
TOP3A-201ENST00000321105 APOBEC2Q9Y235 224 aaKnown RBP11.38□□□□□ -0.59
TOP3A-201ENST00000321105 SLC27A5Q9Y2P5 690 aa11.38□□□□□ -0.59
TOP3A-201ENST00000321105 LAMA4Q16363 1823 aa11.38□□□□□ -0.59
TOP3A-201ENST00000321105 CCT8L1PA6NM43 557 aa11.38□□□□□ -0.59
TOP3A-201ENST00000321105 DGKIO75912 1065 aa11.38□□□□□ -0.59
TOP3A-201ENST00000321105 UBOX5O94941 541 aa11.38□□□□□ -0.59
TOP3A-201ENST00000321105 C22orf31O95567 290 aa11.38□□□□□ -0.59
TOP3A-201ENST00000321105 PAEPP09466 180 aa11.38□□□□□ -0.59
TOP3A-201ENST00000321105 HOXC6P09630 235 aa11.38□□□□□ -0.59
TOP3A-201ENST00000321105 ODC1P11926 461 aa11.38□□□□□ -0.59
TOP3A-201ENST00000321105 BGNP21810 368 aa11.38□□□□□ -0.59
TOP3A-201ENST00000321105 MGAT1P26572 445 aa11.38□□□□□ -0.59
TOP3A-201ENST00000321105 SREBF2Q12772 1141 aa11.38□□□□□ -0.59
TOP3A-201ENST00000321105 TWF1Q12792 350 aa11.38□□□□□ -0.59
TOP3A-201ENST00000321105 DPYSL3Q14195 570 aa11.38□□□□□ -0.59
TOP3A-201ENST00000321105 SLC39A12Q504Y0 691 aa11.38□□□□□ -0.59
TOP3A-201ENST00000321105 SPRYD7Q5W111 196 aa11.38□□□□□ -0.59
TOP3A-201ENST00000321105 SCARA3Q6AZY7 606 aa11.38□□□□□ -0.59
TOP3A-201ENST00000321105 CRELD2Q6UXH1 353 aaPredicted RBP11.38□□□□□ -0.59
TOP3A-201ENST00000321105 TSHZ1Q6ZSZ6 1077 aa11.38□□□□□ -0.59
TOP3A-201ENST00000321105 SLC4A11Q8NBS3 891 aa11.38□□□□□ -0.59
TOP3A-201ENST00000321105 KCNK16Q96T55 309 aa11.38□□□□□ -0.59
TOP3A-201ENST00000321105 MTG1Q9BT17 334 aaPredicted RBP11.38□□□□□ -0.59
TOP3A-201ENST00000321105 TKTL2Q9H0I9 626 aa11.38□□□□□ -0.59
TOP3A-201ENST00000321105 ACTR5Q9H9F9 607 aaPredicted RBP11.38□□□□□ -0.59
TOP3A-201ENST00000321105 AFF4Q9UHB7 1163 aaKnown RBP11.38□□□□□ -0.59
TOP3A-201ENST00000321105 KCNH4Q9UQ05 1017 aa11.38□□□□□ -0.59
TOP3A-201ENST00000321105 IPPQ9Y573 584 aa11.38□□□□□ -0.59
TOP3A-201ENST00000321105 hCG_1818297A0A087WSY0 165 aa11.38□□□□□ -0.59
TOP3A-201ENST00000321105 A0A1W2PPM1 405 aa11.38□□□□□ -0.59
TOP3A-201ENST00000321105 F7P08709 466 aaPredicted RBP11.38□□□□□ -0.59
TOP3A-201ENST00000321105 PBX3P40426 434 aa11.38□□□□□ -0.59
TOP3A-201ENST00000321105 HSP90AA5PQ58FG0 334 aa11.38□□□□□ -0.59
TOP3A-201ENST00000321105 ILDR2Q71H61 639 aa11.38□□□□□ -0.59
TOP3A-201ENST00000321105 NPLOC4Q8TAT6 608 aa11.38□□□□□ -0.59
TOP3A-201ENST00000321105 BLOC1S5Q8TDH9 187 aa11.38□□□□□ -0.59
TOP3A-201ENST00000321105 CHST12Q9NRB3 414 aa11.38□□□□□ -0.59
TOP3A-201ENST00000321105 KLC4Q9NSK0 619 aa11.38□□□□□ -0.59
TOP3A-201ENST00000321105 IPO11Q9UI26 975 aaKnown RBP11.38□□□□□ -0.59
TOP3A-201ENST00000321105 MYH15Q9Y2K3 1946 aa11.38□□□□□ -0.59
TOP3A-201ENST00000321105 BTNL10A8MVZ5 291 aa11.37□□□□□ -0.59
TOP3A-201ENST00000321105 RNF103O00237 685 aa11.37□□□□□ -0.59
TOP3A-201ENST00000321105 UNGP13051 313 aaPredicted RBP11.37□□□□□ -0.59
TOP3A-201ENST00000321105 DARSP14868 501 aaKnown RBP11.37□□□□□ -0.59
TOP3A-201ENST00000321105 MX2P20592 715 aa11.37□□□□□ -0.59
TOP3A-201ENST00000321105 MAP2K2P36507 400 aa11.37□□□□□ -0.59
TOP3A-201ENST00000321105 PEX19P40855 299 aa11.37□□□□□ -0.59
TOP3A-201ENST00000321105 RPL10AP62906 217 aaKnown RBP11.37□□□□□ -0.59
TOP3A-201ENST00000321105 ARHGAP1Q07960 439 aa11.37□□□□□ -0.59
TOP3A-201ENST00000321105 ZNF618Q5T7W0 954 aa11.37□□□□□ -0.59
TOP3A-201ENST00000321105 ITPRIPL1Q6GPH6 555 aa11.37□□□□□ -0.59
TOP3A-201ENST00000321105 RGMBQ6NW40 437 aa11.37□□□□□ -0.59
TOP3A-201ENST00000321105 EXOC3L1Q86VI1 746 aa11.37□□□□□ -0.59
TOP3A-201ENST00000321105 ZNF410Q86VK4 478 aa11.37□□□□□ -0.59
TOP3A-201ENST00000321105 CD302Q8IX05 232 aa11.37□□□□□ -0.59
TOP3A-201ENST00000321105 SPOCK2Q92563 424 aa11.37□□□□□ -0.59
TOP3A-201ENST00000321105 DDX27Q96GQ7 796 aaKnown RBP11.37□□□□□ -0.59
TOP3A-201ENST00000321105 SGSM3Q96HU1 749 aa11.37□□□□□ -0.59
TOP3A-201ENST00000321105 PRDM12Q9H4Q4 367 aa11.37□□□□□ -0.59
TOP3A-201ENST00000321105 LRRC19Q9H756 370 aa11.37□□□□□ -0.59
TOP3A-201ENST00000321105 CYP4F12Q9HCS2 524 aa11.37□□□□□ -0.59
TOP3A-201ENST00000321105 VANGL2Q9ULK5 521 aa11.37□□□□□ -0.59
TOP3A-201ENST00000321105 COQ4Q9Y3A0 265 aa11.37□□□□□ -0.59
TOP3A-201ENST00000321105 MANSC4A6NHS7 340 aaPredicted RBP11.37□□□□□ -0.59
TOP3A-201ENST00000321105 IGF2BP3O00425 579 aaKnown RBP eCLIP11.37□□□□□ -0.59
TOP3A-201ENST00000321105 B4GALT4O60513 344 aa11.37□□□□□ -0.59
TOP3A-201ENST00000321105 RPA3P35244 121 aaPredicted RBP11.37□□□□□ -0.59
TOP3A-201ENST00000321105 FAM110CQ1W6H9 321 aa11.37□□□□□ -0.59
TOP3A-201ENST00000321105 SH2D4BQ5SQS7 431 aa11.37□□□□□ -0.59
TOP3A-201ENST00000321105 TAS2R42Q7RTR8 314 aa11.37□□□□□ -0.59
TOP3A-201ENST00000321105 FBXO32Q969P5 355 aa11.37□□□□□ -0.59
TOP3A-201ENST00000321105 ZCWPW1Q9H0M4 648 aa11.37□□□□□ -0.59
TOP3A-201ENST00000321105 MANSC1Q9H8J5 431 aa11.37□□□□□ -0.59
TOP3A-201ENST00000321105 SNX10Q9Y5X0 201 aa11.37□□□□□ -0.59
TOP3A-201ENST00000321105 SLC12A8A0AV02 714 aa11.37□□□□□ -0.59
TOP3A-201ENST00000321105 APOC4-APOC2K7ER74 178 aa11.37□□□□□ -0.59
TOP3A-201ENST00000321105 CES2O00748 559 aa11.37□□□□□ -0.59
TOP3A-201ENST00000321105 DCTN3O75935 186 aa11.37□□□□□ -0.59
TOP3A-201ENST00000321105 APOC2P02655 101 aa11.37□□□□□ -0.59
TOP3A-201ENST00000321105 POLBP06746 335 aa11.37□□□□□ -0.59
TOP3A-201ENST00000321105 KCNA4P22459 653 aa11.37□□□□□ -0.59
TOP3A-201ENST00000321105 ALDH7A1P49419 539 aaKnown RBP11.37□□□□□ -0.59
TOP3A-201ENST00000321105 ZNF143P52747 638 aaPredicted RBP11.37□□□□□ -0.59
TOP3A-201ENST00000321105 STX3Q13277 289 aa11.37□□□□□ -0.59
TOP3A-201ENST00000321105 QPCTQ16769 361 aa11.37□□□□□ -0.59
TOP3A-201ENST00000321105 DDR2Q16832 855 aa11.37□□□□□ -0.59
TOP3A-201ENST00000321105 ANKRD22Q5VYY1 191 aa11.37□□□□□ -0.59
TOP3A-201ENST00000321105 PLEKHA7Q6IQ23 1121 aa11.37□□□□□ -0.59
TOP3A-201ENST00000321105 TAF2Q6P1X5 1199 aa11.37□□□□□ -0.59
TOP3A-201ENST00000321105 PPWD1Q96BP3 646 aaKnown RBP11.37□□□□□ -0.59
TOP3A-201ENST00000321105 FAM129AQ9BZQ8 928 aa11.37□□□□□ -0.59
TOP3A-201ENST00000321105 SFMBT1Q9UHJ3 866 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms