RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 THAP1Q9NVV9 213 aa19.8■□□□□ 0.76
RTN4-201ENST00000317610 KAT6AQ92794 2004 aa19.8■□□□□ 0.76
RTN4-201ENST00000317610 CILPO75339 1184 aa19.8■□□□□ 0.76
RTN4-201ENST00000317610 IL4RP24394 825 aa19.8■□□□□ 0.76
RTN4-201ENST00000317610 RBL1P28749 1068 aa19.8■□□□□ 0.76
RTN4-201ENST00000317610 SERPINB9P50453 376 aa19.8■□□□□ 0.76
RTN4-201ENST00000317610 CXCL9Q07325 125 aa19.8■□□□□ 0.76
RTN4-201ENST00000317610 PDK2Q15119 407 aa19.8■□□□□ 0.76
RTN4-201ENST00000317610 AAGABQ6PD74 315 aa19.8■□□□□ 0.76
RTN4-201ENST00000317610 IZUMO2Q6UXV1 221 aa19.8■□□□□ 0.76
RTN4-201ENST00000317610 TSHZ1Q6ZSZ6 1077 aa19.8■□□□□ 0.76
RTN4-201ENST00000317610 ZBTB8OSQ8IWT0 167 aa19.8■□□□□ 0.76
RTN4-201ENST00000317610 PQLC3Q8N755 202 aa19.8■□□□□ 0.76
RTN4-201ENST00000317610 STKLD1Q8NE28 680 aa19.8■□□□□ 0.76
RTN4-201ENST00000317610 DNERQ8NFT8 737 aa19.8■□□□□ 0.76
RTN4-201ENST00000317610 GSDMBQ8TAX9 411 aa19.8■□□□□ 0.76
RTN4-201ENST00000317610 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.8■□□□□ 0.76
RTN4-201ENST00000317610 FARP2O94887 1054 aaPredicted RBP19.79■□□□□ 0.76
RTN4-201ENST00000317610 HMGCRP04035 888 aa19.79■□□□□ 0.76
RTN4-201ENST00000317610 UBA1P22314 1058 aaKnown RBP19.79■□□□□ 0.76
RTN4-201ENST00000317610 STAT5BP51692 787 aa19.79■□□□□ 0.76
RTN4-201ENST00000317610 ALDH18A1P54886 795 aaKnown RBP19.79■□□□□ 0.76
RTN4-201ENST00000317610 LAMTOR4Q0VGL1 99 aa19.79■□□□□ 0.76
RTN4-201ENST00000317610 STX3Q13277 289 aa19.79■□□□□ 0.76
RTN4-201ENST00000317610 RAB6CQ53S08 254 aa19.79■□□□□ 0.76
RTN4-201ENST00000317610 STXBP5Q5T5C0 1151 aa19.79■□□□□ 0.76
RTN4-201ENST00000317610 C4orf22Q6V702 233 aa19.79■□□□□ 0.76
RTN4-201ENST00000317610 SESTD1Q86VW0 696 aa19.79■□□□□ 0.76
RTN4-201ENST00000317610 NIM1KQ8IY84 436 aa19.79■□□□□ 0.76
RTN4-201ENST00000317610 TTLL6Q8N841 843 aa19.79■□□□□ 0.76
RTN4-201ENST00000317610 ZNF280CQ8ND82 737 aa19.79■□□□□ 0.76
RTN4-201ENST00000317610 USP6NLQ92738 828 aa19.79■□□□□ 0.76
RTN4-201ENST00000317610 TMEM176AQ96HP8 235 aa19.79■□□□□ 0.76
RTN4-201ENST00000317610 FGD4Q96M96 766 aa19.79■□□□□ 0.76
RTN4-201ENST00000317610 RAB6CQ9H0N0 254 aa19.79■□□□□ 0.76
RTN4-201ENST00000317610 AS3MTQ9HBK9 375 aa19.79■□□□□ 0.76
RTN4-201ENST00000317610 PCMTD2Q9NV79 361 aa19.79■□□□□ 0.76
RTN4-201ENST00000317610 MARCOQ9UEW3 520 aaPredicted RBP19.79■□□□□ 0.76
RTN4-201ENST00000317610 HMGXB4Q9UGU5 601 aa19.79■□□□□ 0.76
RTN4-201ENST00000317610 M0QYV0 167 aa19.79■□□□□ 0.76
RTN4-201ENST00000317610 BUD23O43709 281 aaKnown RBP19.79■□□□□ 0.76
RTN4-201ENST00000317610 KITP10721 976 aa19.79■□□□□ 0.76
RTN4-201ENST00000317610 FSTL1Q12841 308 aa19.79■□□□□ 0.76
RTN4-201ENST00000317610 ORC1Q13415 861 aa19.79■□□□□ 0.76
RTN4-201ENST00000317610 TUBB3Q13509 450 aa19.79■□□□□ 0.76
RTN4-201ENST00000317610 FAXCQ5TGI0 409 aa19.79■□□□□ 0.76
RTN4-201ENST00000317610 C1orf146Q5VVC0 180 aa19.79■□□□□ 0.76
RTN4-201ENST00000317610 SLC9A4Q6AI14 798 aa19.79■□□□□ 0.76
RTN4-201ENST00000317610 ZNF534Q76KX8 674 aa19.79■□□□□ 0.76
RTN4-201ENST00000317610 MAP7D3Q8IWC1 876 aa19.79■□□□□ 0.76
RTN4-201ENST00000317610 NDUFAF2Q8N183 169 aa19.79■□□□□ 0.76
RTN4-201ENST00000317610 RXFP2Q8WXD0 754 aa19.79■□□□□ 0.76
RTN4-201ENST00000317610 SIGLEC10Q96LC7 697 aa19.79■□□□□ 0.76
RTN4-201ENST00000317610 STN1Q9H668 368 aaKnown RBP19.79■□□□□ 0.76
RTN4-201ENST00000317610 SMYD3Q9H7B4 428 aa19.79■□□□□ 0.76
RTN4-201ENST00000317610 SOX13Q9UN79 622 aa19.79■□□□□ 0.76
RTN4-201ENST00000317610 A0A088AWK7 358 aa19.78■□□□□ 0.76
RTN4-201ENST00000317610 APOL1O14791 398 aa19.78■□□□□ 0.76
RTN4-201ENST00000317610 PRPSAP2O60256 369 aa19.78■□□□□ 0.76
RTN4-201ENST00000317610 ZBED1O96006 694 aa19.78■□□□□ 0.76
RTN4-201ENST00000317610 APRTP07741 180 aa19.78■□□□□ 0.76
RTN4-201ENST00000317610 CDC16Q13042 620 aa19.78■□□□□ 0.76
RTN4-201ENST00000317610 HNRNPDQ14103 355 aaKnown RBP19.78■□□□□ 0.76
RTN4-201ENST00000317610 MXD4Q14582 209 aaPredicted RBP19.78■□□□□ 0.76
RTN4-201ENST00000317610 FAM160B1Q5W0V3 765 aa19.78■□□□□ 0.76
RTN4-201ENST00000317610 ADGRF2Q8IZF7 708 aa19.78■□□□□ 0.76
RTN4-201ENST00000317610 EBNA1BP2Q99848 306 aaKnown RBP19.78■□□□□ 0.76
RTN4-201ENST00000317610 EBF4Q9BQW3 602 aa19.78■□□□□ 0.76
RTN4-201ENST00000317610 C2orf40Q9H1Z8 148 aa19.78■□□□□ 0.76
RTN4-201ENST00000317610 PPM1HQ9ULR3 514 aa19.78■□□□□ 0.76
RTN4-201ENST00000317610 GSRP00390 522 aa19.77■□□□□ 0.76
RTN4-201ENST00000317610 SRGAP2CP0DJJ0 459 aa19.77■□□□□ 0.76
RTN4-201ENST00000317610 UBAP2LQ14157 1087 aaKnown RBP19.77■□□□□ 0.76
RTN4-201ENST00000317610 KRT81Q14533 505 aa19.77■□□□□ 0.76
RTN4-201ENST00000317610 CCNJLQ8IV13 435 aa19.77■□□□□ 0.76
RTN4-201ENST00000317610 RNF149Q8NC42 400 aa19.77■□□□□ 0.76
RTN4-201ENST00000317610 AZIN2Q96A70 460 aa19.77■□□□□ 0.76
RTN4-201ENST00000317610 XAB2Q9HCS7 855 aaKnown RBP19.77■□□□□ 0.76
RTN4-201ENST00000317610 ZDHHC7Q9NXF8 308 aa19.77■□□□□ 0.76
RTN4-201ENST00000317610 CSDE1O75534 798 aaKnown RBP19.77■□□□□ 0.76
RTN4-201ENST00000317610 IL18RAPO95256 599 aa19.77■□□□□ 0.76
RTN4-201ENST00000317610 KRT19P08727 400 aa19.77■□□□□ 0.76
RTN4-201ENST00000317610 UBTFL6P0CB48 400 aaPredicted RBP19.77■□□□□ 0.76
RTN4-201ENST00000317610 PDGFRAP16234 1089 aa19.77■□□□□ 0.76
RTN4-201ENST00000317610 TPSB2P20231 275 aa19.77■□□□□ 0.76
RTN4-201ENST00000317610 CNTFP26441 200 aa19.77■□□□□ 0.76
RTN4-201ENST00000317610 BCAR1P56945 870 aa19.77■□□□□ 0.76
RTN4-201ENST00000317610 TPSAB1Q15661 275 aa19.77■□□□□ 0.76
RTN4-201ENST00000317610 C15orf59Q2T9L4 293 aaPredicted RBP19.77■□□□□ 0.76
RTN4-201ENST00000317610 RABGAP1LQ5R372 815 aa19.77■□□□□ 0.76
RTN4-201ENST00000317610 FAM182AQ5T1J6 154 aa19.77■□□□□ 0.76
RTN4-201ENST00000317610 TRMT10BQ6PF06 316 aaKnown RBP19.77■□□□□ 0.76
RTN4-201ENST00000317610 CYS1Q717R9 158 aa19.77■□□□□ 0.76
RTN4-201ENST00000317610 C1orf127Q8N9H9 656 aa19.77■□□□□ 0.76
RTN4-201ENST00000317610 PPP2R3CQ969Q6 453 aa19.77■□□□□ 0.76
RTN4-201ENST00000317610 RILPQ96NA2 401 aa19.77■□□□□ 0.76
RTN4-201ENST00000317610 GBP5Q96PP8 586 aa19.77■□□□□ 0.76
RTN4-201ENST00000317610 PCDHA11Q9Y5I1 949 aa19.77■□□□□ 0.76
RTN4-201ENST00000317610 DPYSL4O14531 572 aa19.76■□□□□ 0.75
RTN4-201ENST00000317610 GAS2O43903 313 aaKnown RBP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 269 ms