RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 PM20D1Q6GTS8 502 aa8.24□□□□□ -1.09
CDC42-201ENST00000315554 MMS22LQ6ZRQ5 1243 aa8.24□□□□□ -1.09
CDC42-201ENST00000315554 FAM183BPQ6ZVS7 135 aa8.24□□□□□ -1.09
CDC42-201ENST00000315554 RSRC2Q7L4I2 434 aaKnown RBP8.24□□□□□ -1.09
CDC42-201ENST00000315554 ZNF571Q7Z3V5 609 aaPredicted RBP8.24□□□□□ -1.09
CDC42-201ENST00000315554 YAF2Q8IY57 180 aa8.24□□□□□ -1.09
CDC42-201ENST00000315554 GPATCH11Q8N954 259 aa8.24□□□□□ -1.09
CDC42-201ENST00000315554 OLIG1Q8TAK6 271 aa8.24□□□□□ -1.09
CDC42-201ENST00000315554 IPO4Q8TEX9 1081 aaKnown RBP8.24□□□□□ -1.09
CDC42-201ENST00000315554 ELSPBP1Q96BH3 223 aa8.24□□□□□ -1.09
CDC42-201ENST00000315554 FAM149B1Q96BN6 582 aa8.24□□□□□ -1.09
CDC42-201ENST00000315554 ASIC4Q96FT7 647 aa8.24□□□□□ -1.09
CDC42-201ENST00000315554 C11orf70Q9BRQ4 267 aa8.24□□□□□ -1.09
CDC42-201ENST00000315554 LHX5Q9H2C1 402 aa8.24□□□□□ -1.09
CDC42-201ENST00000315554 EPHX3Q9H6B9 360 aa8.24□□□□□ -1.09
CDC42-201ENST00000315554 CNGB3Q9NQW8 809 aa8.24□□□□□ -1.09
CDC42-201ENST00000315554 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.24□□□□□ -1.09
CDC42-201ENST00000315554 TAS2R14Q9NYV8 317 aa8.24□□□□□ -1.09
CDC42-201ENST00000315554 CFAP97Q9P2B7 532 aa8.24□□□□□ -1.09
CDC42-201ENST00000315554 SFMBT1Q9UHJ3 866 aa8.24□□□□□ -1.09
CDC42-201ENST00000315554 CAPN11Q9UMQ6 739 aa8.24□□□□□ -1.09
CDC42-201ENST00000315554 SORCS3Q9UPU3 1222 aa8.24□□□□□ -1.09
CDC42-201ENST00000315554 LUC7L2Q9Y383 392 aaKnown RBP8.24□□□□□ -1.09
CDC42-201ENST00000315554 CEP83Q9Y592 693 aa8.24□□□□□ -1.09
CDC42-201ENST00000315554 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.24□□□□□ -1.09
CDC42-201ENST00000315554 WNT6Q9Y6F9 365 aa8.24□□□□□ -1.09
CDC42-201ENST00000315554 ZNF638Q14966 1978 aaKnown RBP8.24□□□□□ -1.09
CDC42-201ENST00000315554 ITIH6Q6UXX5 1313 aa8.23□□□□□ -1.09
CDC42-201ENST00000315554 COL4A3Q01955 1670 aa8.23□□□□□ -1.09
CDC42-201ENST00000315554 A0A1W2PQJ5 194 aa8.23□□□□□ -1.09
CDC42-201ENST00000315554 BDP1A6H8Y1 2624 aa8.23□□□□□ -1.09
CDC42-201ENST00000315554 MSI1O43347 362 aaKnown RBP8.23□□□□□ -1.09
CDC42-201ENST00000315554 DCXO43602 365 aa8.23□□□□□ -1.09
CDC42-201ENST00000315554 FBXO21O94952 628 aa8.23□□□□□ -1.09
CDC42-201ENST00000315554 GJB6O95452 261 aa8.23□□□□□ -1.09
CDC42-201ENST00000315554 OLFM2O95897 454 aa8.23□□□□□ -1.09
CDC42-201ENST00000315554 LTFP02788 710 aa8.23□□□□□ -1.09
CDC42-201ENST00000315554 CYP1A1P04798 512 aaPredicted RBP8.23□□□□□ -1.09
CDC42-201ENST00000315554 FYNP06241 537 aa8.23□□□□□ -1.09
CDC42-201ENST00000315554 RALAP11233 206 aa8.23□□□□□ -1.09
CDC42-201ENST00000315554 PSMC3P17980 439 aa8.23□□□□□ -1.09
CDC42-201ENST00000315554 TNFAIP3P21580 790 aa8.23□□□□□ -1.09
CDC42-201ENST00000315554 CDH5P33151 784 aaPredicted RBP8.23□□□□□ -1.09
CDC42-201ENST00000315554 ACADSBP45954 432 aa8.23□□□□□ -1.09
CDC42-201ENST00000315554 RPL34P49207 117 aaKnown RBP8.23□□□□□ -1.09
CDC42-201ENST00000315554 ADKP55263 362 aaKnown RBP8.23□□□□□ -1.09
CDC42-201ENST00000315554 SLC7A9P82251 487 aa8.23□□□□□ -1.09
CDC42-201ENST00000315554 PRR20EP86478 221 aa8.23□□□□□ -1.09
CDC42-201ENST00000315554 PRR20CP86479 221 aa8.23□□□□□ -1.09
CDC42-201ENST00000315554 PRR20DP86480 221 aa8.23□□□□□ -1.09
CDC42-201ENST00000315554 PRR20BP86481 221 aa8.23□□□□□ -1.09
CDC42-201ENST00000315554 PRR20AP86496 221 aa8.23□□□□□ -1.09
CDC42-201ENST00000315554 ZXDAP98168 799 aa8.23□□□□□ -1.09
CDC42-201ENST00000315554 TNK2Q07912 1038 aa8.23□□□□□ -1.09
CDC42-201ENST00000315554 MTF1Q14872 753 aa8.23□□□□□ -1.09
CDC42-201ENST00000315554 ZNF77Q15935 545 aa8.23□□□□□ -1.09
CDC42-201ENST00000315554 CLEC16AQ2KHT3 1053 aa8.23□□□□□ -1.09
CDC42-201ENST00000315554 SNX30Q5VWJ9 437 aa8.23□□□□□ -1.09
CDC42-201ENST00000315554 TMEM110Q86TL2 294 aa8.23□□□□□ -1.09
CDC42-201ENST00000315554 ERICH1Q86X53 443 aa8.23□□□□□ -1.09
CDC42-201ENST00000315554 ZNF677Q86XU0 584 aa8.23□□□□□ -1.09
CDC42-201ENST00000315554 MFSD6LQ8IWD5 586 aa8.23□□□□□ -1.09
CDC42-201ENST00000315554 ARHGAP18Q8N392 663 aa8.23□□□□□ -1.09
CDC42-201ENST00000315554 CELF5Q8N6W0 485 aaKnown RBP8.23□□□□□ -1.09
CDC42-201ENST00000315554 ZNF397Q8NF99 534 aaPredicted RBP8.23□□□□□ -1.09
CDC42-201ENST00000315554 ADAM32Q8TC27 787 aa8.23□□□□□ -1.09
CDC42-201ENST00000315554 BPIFB1Q8TDL5 484 aa8.23□□□□□ -1.09
CDC42-201ENST00000315554 STK32AQ8WU08 396 aa8.23□□□□□ -1.09
CDC42-201ENST00000315554 NOX5Q96PH1 765 aa8.23□□□□□ -1.09
CDC42-201ENST00000315554 ANP32EQ9BTT0 268 aa8.23□□□□□ -1.09
CDC42-201ENST00000315554 TRMT61BQ9BVS5 477 aaKnown RBP8.23□□□□□ -1.09
CDC42-201ENST00000315554 EDEM3Q9BZQ6 932 aa8.23□□□□□ -1.09
CDC42-201ENST00000315554 BRD9Q9H8M2 597 aa8.23□□□□□ -1.09
CDC42-201ENST00000315554 TRPV4Q9HBA0 871 aa8.23□□□□□ -1.09
CDC42-201ENST00000315554 CYLDQ9NQC7 956 aa8.23□□□□□ -1.09
CDC42-201ENST00000315554 AIPL1Q9NZN9 384 aa8.23□□□□□ -1.09
CDC42-201ENST00000315554 CA14Q9ULX7 337 aa8.23□□□□□ -1.09
CDC42-201ENST00000315554 MYO6Q9UM54 1294 aa8.23□□□□□ -1.09
CDC42-201ENST00000315554 ARHGAP26Q9UNA1 814 aa8.23□□□□□ -1.09
CDC42-201ENST00000315554 NAALADL1Q9UQQ1 740 aa8.23□□□□□ -1.09
CDC42-201ENST00000315554 ANAPC1Q9H1A4 1944 aa8.23□□□□□ -1.09
CDC42-201ENST00000315554 SYNJ2BP-COX16A0A087WUM0 186 aa8.22□□□□□ -1.09
CDC42-201ENST00000315554 SLC12A8A0AV02 714 aa8.22□□□□□ -1.09
CDC42-201ENST00000315554 FAM86C2PA6NEL3 165 aa8.22□□□□□ -1.09
CDC42-201ENST00000315554 DLL1O00548 723 aa8.22□□□□□ -1.09
CDC42-201ENST00000315554 ZNF263O14978 683 aa8.22□□□□□ -1.09
CDC42-201ENST00000315554 LSM8O95777 96 aaKnown RBP8.22□□□□□ -1.09
CDC42-201ENST00000315554 CCDC172P0C7W6 258 aa8.22□□□□□ -1.09
CDC42-201ENST00000315554 NCAM1P13591 858 aa8.22□□□□□ -1.09
CDC42-201ENST00000315554 ARSAP15289 507 aa8.22□□□□□ -1.09
CDC42-201ENST00000315554 ATP5C1P36542 298 aaKnown RBP8.22□□□□□ -1.09
CDC42-201ENST00000315554 SOX9P48436 509 aa8.22□□□□□ -1.09
CDC42-201ENST00000315554 RNASE9P60153 205 aaKnown RBP8.22□□□□□ -1.09
CDC42-201ENST00000315554 PITX1P78337 314 aaPredicted RBP8.22□□□□□ -1.09
CDC42-201ENST00000315554 USP4Q13107 963 aa8.22□□□□□ -1.09
CDC42-201ENST00000315554 CAMK2BQ13554 666 aa8.22□□□□□ -1.09
CDC42-201ENST00000315554 ZNF268Q14587 947 aaPredicted RBP8.22□□□□□ -1.09
CDC42-201ENST00000315554 SYPL2Q5VXT5 272 aa8.22□□□□□ -1.09
CDC42-201ENST00000315554 HGSNATQ68CP4 663 aa8.22□□□□□ -1.09
CDC42-201ENST00000315554 CC2D1AQ6P1N0 951 aaPredicted RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms