RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 STAT5BP51692 787 aa14.35□□□□□ -0.11
MKS1-201ENST00000313863 ALDH18A1P54886 795 aaKnown RBP14.35□□□□□ -0.11
MKS1-201ENST00000313863 SP2Q02086 613 aa14.35□□□□□ -0.11
MKS1-201ENST00000313863 DCAF15Q66K64 600 aa14.35□□□□□ -0.11
MKS1-201ENST00000313863 TTLL6Q8N841 843 aa14.35□□□□□ -0.11
MKS1-201ENST00000313863 STKLD1Q8NE28 680 aa14.35□□□□□ -0.11
MKS1-201ENST00000313863 JADE3Q92613 823 aa14.35□□□□□ -0.11
MKS1-201ENST00000313863 C12orf42Q96LP6 360 aa14.35□□□□□ -0.11
MKS1-201ENST00000313863 PANX3Q96QZ0 392 aa14.35□□□□□ -0.11
MKS1-201ENST00000313863 TBCBQ99426 244 aa14.35□□□□□ -0.11
MKS1-201ENST00000313863 MECRQ9BV79 373 aa14.35□□□□□ -0.11
MKS1-201ENST00000313863 TJP2Q9UDY2 1190 aa14.35□□□□□ -0.11
MKS1-201ENST00000313863 SLC7A8Q9UHI5 535 aa14.35□□□□□ -0.11
MKS1-201ENST00000313863 ZNF487B1APH4 448 aa14.34□□□□□ -0.11
MKS1-201ENST00000313863 AVILO75366 819 aa14.34□□□□□ -0.11
MKS1-201ENST00000313863 MICAL2O94851 1124 aa14.34□□□□□ -0.11
MKS1-201ENST00000313863 UPP2O95045 317 aa14.34□□□□□ -0.11
MKS1-201ENST00000313863 TPSB2P20231 275 aa14.34□□□□□ -0.11
MKS1-201ENST00000313863 ATICP31939 592 aa14.34□□□□□ -0.11
MKS1-201ENST00000313863 RPL26P61254 145 aaKnown RBP14.34□□□□□ -0.11
MKS1-201ENST00000313863 TAF5Q15542 800 aa14.34□□□□□ -0.11
MKS1-201ENST00000313863 TPSAB1Q15661 275 aa14.34□□□□□ -0.11
MKS1-201ENST00000313863 C1orf228Q6PIY5 440 aa14.34□□□□□ -0.11
MKS1-201ENST00000313863 TSHZ1Q6ZSZ6 1077 aa14.34□□□□□ -0.11
MKS1-201ENST00000313863 CYS1Q717R9 158 aa14.34□□□□□ -0.11
MKS1-201ENST00000313863 CAND1Q86VP6 1230 aaKnown RBP14.34□□□□□ -0.11
MKS1-201ENST00000313863 PLD5Q8N7P1 536 aa14.34□□□□□ -0.11
MKS1-201ENST00000313863 ATP2A3Q93084 1043 aa14.34□□□□□ -0.11
MKS1-201ENST00000313863 TMEM176AQ96HP8 235 aa14.34□□□□□ -0.11
MKS1-201ENST00000313863 EBNA1BP2Q99848 306 aaKnown RBP14.34□□□□□ -0.11
MKS1-201ENST00000313863 IFT122Q9HBG6 1241 aa14.34□□□□□ -0.11
MKS1-201ENST00000313863 PCMTD2Q9NV79 361 aa14.34□□□□□ -0.11
MKS1-201ENST00000313863 KIAA1257Q9ULG3 409 aa14.34□□□□□ -0.11
MKS1-201ENST00000313863 APOBEC2Q9Y235 224 aaKnown RBP14.34□□□□□ -0.11
MKS1-201ENST00000313863 MGAMO43451 1857 aa14.34□□□□□ -0.11
MKS1-201ENST00000313863 CCDC195A0A1B0GUA6 201 aa14.34□□□□□ -0.11
MKS1-201ENST00000313863 SLC15A5A6NIM6 579 aa14.34□□□□□ -0.11
MKS1-201ENST00000313863 SDR42E2A6NKP2 422 aa14.34□□□□□ -0.11
MKS1-201ENST00000313863 CXorf49A8MYA2 514 aaPredicted RBP14.34□□□□□ -0.11
MKS1-201ENST00000313863 C19orf81C9J6K1 198 aa14.34□□□□□ -0.11
MKS1-201ENST00000313863 BAG2O95816 211 aa14.34□□□□□ -0.11
MKS1-201ENST00000313863 APBA3O96018 575 aa14.34□□□□□ -0.11
MKS1-201ENST00000313863 APRTP07741 180 aa14.34□□□□□ -0.11
MKS1-201ENST00000313863 KRT19P08727 400 aa14.34□□□□□ -0.11
MKS1-201ENST00000313863 PDGFRAP16234 1089 aa14.34□□□□□ -0.11
MKS1-201ENST00000313863 LAMTOR4Q0VGL1 99 aa14.34□□□□□ -0.11
MKS1-201ENST00000313863 MMRN1Q13201 1228 aa14.34□□□□□ -0.11
MKS1-201ENST00000313863 NAB1Q13506 487 aa14.34□□□□□ -0.11
MKS1-201ENST00000313863 EFHC1Q5JVL4 640 aa14.34□□□□□ -0.11
MKS1-201ENST00000313863 SCARA3Q6AZY7 606 aa14.34□□□□□ -0.11
MKS1-201ENST00000313863 UNC5AQ6ZN44 842 aa14.34□□□□□ -0.11
MKS1-201ENST00000313863 KBTBD2Q8IY47 623 aa14.34□□□□□ -0.11
MKS1-201ENST00000313863 ST13P4Q8IZP2 240 aaPredicted RBP14.34□□□□□ -0.11
MKS1-201ENST00000313863 ZNF280CQ8ND82 737 aa14.34□□□□□ -0.11
MKS1-201ENST00000313863 PIP4K2CQ8TBX8 421 aa14.34□□□□□ -0.11
MKS1-201ENST00000313863 DEPDC1BQ8WUY9 529 aa14.34□□□□□ -0.11
MKS1-201ENST00000313863 PEBP4Q96S96 227 aa14.34□□□□□ -0.11
MKS1-201ENST00000313863 RPF1Q9H9Y2 349 aaKnown RBP14.34□□□□□ -0.11
MKS1-201ENST00000313863 VCX3AQ9NNX9 186 aa14.34□□□□□ -0.11
MKS1-201ENST00000313863 PICK1Q9NRD5 415 aa14.34□□□□□ -0.11
MKS1-201ENST00000313863 ZNF277Q9NRM2 450 aaPredicted RBP14.34□□□□□ -0.11
MKS1-201ENST00000313863 ZDHHC7Q9NXF8 308 aa14.34□□□□□ -0.11
MKS1-201ENST00000313863 PCDHA11Q9Y5I1 949 aa14.34□□□□□ -0.11
MKS1-201ENST00000313863 COL4A5P29400 1685 aa14.33□□□□□ -0.12
MKS1-201ENST00000313863 SCN4AP35499 1836 aa14.33□□□□□ -0.12
MKS1-201ENST00000313863 C2CD4BA6NLJ0 364 aa14.33□□□□□ -0.12
MKS1-201ENST00000313863 ZFXP17010 805 aaPredicted RBP14.33□□□□□ -0.12
MKS1-201ENST00000313863 PROZP22891 400 aa14.33□□□□□ -0.12
MKS1-201ENST00000313863 RAB27AP51159 221 aa14.33□□□□□ -0.12
MKS1-201ENST00000313863 POLE2P56282 527 aa14.33□□□□□ -0.12
MKS1-201ENST00000313863 HNRNPDQ14103 355 aaKnown RBP14.33□□□□□ -0.12
MKS1-201ENST00000313863 TMEM132BQ14DG7 1078 aa14.33□□□□□ -0.12
MKS1-201ENST00000313863 TMEM132AQ24JP5 1023 aa14.33□□□□□ -0.12
MKS1-201ENST00000313863 RNF217Q8TC41 542 aa14.33□□□□□ -0.12
MKS1-201ENST00000313863 PIWIL2Q8TC59 973 aaKnown RBP14.33□□□□□ -0.12
MKS1-201ENST00000313863 PPP4R1Q8TF05 950 aa14.33□□□□□ -0.12
MKS1-201ENST00000313863 ZNF526Q8TF50 670 aaPredicted RBP14.33□□□□□ -0.12
MKS1-201ENST00000313863 RXFP2Q8WXD0 754 aa14.33□□□□□ -0.12
MKS1-201ENST00000313863 TTC1Q99614 292 aa14.33□□□□□ -0.12
MKS1-201ENST00000313863 ITGA11Q9UKX5 1188 aa14.33□□□□□ -0.12
MKS1-201ENST00000313863 SSX2IPQ9Y2D8 614 aa14.33□□□□□ -0.12
MKS1-201ENST00000313863 SLC4A7Q9Y6M7 1214 aa14.33□□□□□ -0.12
MKS1-201ENST00000313863 PRR5-ARHGAP8B1AHC4 643 aa14.32□□□□□ -0.12
MKS1-201ENST00000313863 ACKR2O00590 384 aa14.32□□□□□ -0.12
MKS1-201ENST00000313863 DPYSL4O14531 572 aa14.32□□□□□ -0.12
MKS1-201ENST00000313863 GLRA3O75311 464 aa14.32□□□□□ -0.12
MKS1-201ENST00000313863 CILPO75339 1184 aa14.32□□□□□ -0.12
MKS1-201ENST00000313863 KITP10721 976 aa14.32□□□□□ -0.12
MKS1-201ENST00000313863 RBL1P28749 1068 aa14.32□□□□□ -0.12
MKS1-201ENST00000313863 GPD2P43304 727 aa14.32□□□□□ -0.12
MKS1-201ENST00000313863 MAGEA3P43357 314 aa14.32□□□□□ -0.12
MKS1-201ENST00000313863 RAP1GAPP47736 663 aa14.32□□□□□ -0.12
MKS1-201ENST00000313863 SNX16P57768 344 aa14.32□□□□□ -0.12
MKS1-201ENST00000313863 ARHGAP8P85298 464 aa14.32□□□□□ -0.12
MKS1-201ENST00000313863 STILQ15468 1287 aa14.32□□□□□ -0.12
MKS1-201ENST00000313863 HSF5Q4G112 596 aaPredicted RBP14.32□□□□□ -0.12
MKS1-201ENST00000313863 ATF7IP2Q5U623 682 aa14.32□□□□□ -0.12
MKS1-201ENST00000313863 SLC9A4Q6AI14 798 aa14.32□□□□□ -0.12
MKS1-201ENST00000313863 ACAD11Q709F0 780 aa14.32□□□□□ -0.12
MKS1-201ENST00000313863 CHST13Q8NET6 341 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms