RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 DEPDC1BQ8WUY9 529 aa15.2■□□□□ 0.02
COL6A2-202ENST00000310645 PPP1R36Q96LQ0 422 aa15.2■□□□□ 0.02
COL6A2-202ENST00000310645 C8orf37Q96NL8 207 aa15.2■□□□□ 0.02
COL6A2-202ENST00000310645 RAB6CQ9H0N0 254 aa15.2■□□□□ 0.02
COL6A2-202ENST00000310645 PIH1D1Q9NWS0 290 aaKnown RBP15.2■□□□□ 0.02
COL6A2-202ENST00000310645 K7ERI5 159 aa15.19■□□□□ 0.02
COL6A2-202ENST00000310645 KLHL2O95198 593 aa15.19■□□□□ 0.02
COL6A2-202ENST00000310645 TFAP2AP05549 437 aa15.19■□□□□ 0.02
COL6A2-202ENST00000310645 SH2D4BQ5SQS7 431 aa15.19■□□□□ 0.02
COL6A2-202ENST00000310645 SH3PXD2AQ5TCZ1 1133 aa15.19■□□□□ 0.02
COL6A2-202ENST00000310645 FRMD7Q6ZUT3 714 aa15.19■□□□□ 0.02
COL6A2-202ENST00000310645 ADGRF2Q8IZF7 708 aa15.19■□□□□ 0.02
COL6A2-202ENST00000310645 MTMR12Q9C0I1 747 aa15.19■□□□□ 0.02
COL6A2-202ENST00000310645 UBAP1Q9NZ09 502 aa15.19■□□□□ 0.02
COL6A2-202ENST00000310645 H0YIN7 160 aa15.19■□□□□ 0.02
COL6A2-202ENST00000310645 CCNT2O60583 730 aaKnown RBP15.19■□□□□ 0.02
COL6A2-202ENST00000310645 SNNO75324 88 aaPredicted RBP15.19■□□□□ 0.02
COL6A2-202ENST00000310645 ITGBL1O95965 494 aaPredicted RBP15.19■□□□□ 0.02
COL6A2-202ENST00000310645 GRM2Q14416 872 aa15.19■□□□□ 0.02
COL6A2-202ENST00000310645 KCNJ11Q14654 390 aa15.19■□□□□ 0.02
COL6A2-202ENST00000310645 N4BP2L1Q5TBK1 243 aaPredicted RBP15.19■□□□□ 0.02
COL6A2-202ENST00000310645 CASC4Q6P4E1 433 aa15.19■□□□□ 0.02
COL6A2-202ENST00000310645 THNSL1Q8IYQ7 743 aa15.19■□□□□ 0.02
COL6A2-202ENST00000310645 RNF148Q8N7C7 305 aa15.19■□□□□ 0.02
COL6A2-202ENST00000310645 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.19■□□□□ 0.02
COL6A2-202ENST00000310645 SCAF8Q9UPN6 1271 aaKnown RBP15.19■□□□□ 0.02
COL6A2-202ENST00000310645 E9PBE3 544 aa15.18■□□□□ 0.02
COL6A2-202ENST00000310645 KLHL41O60662 606 aa15.18■□□□□ 0.02
COL6A2-202ENST00000310645 SPAG6O75602 509 aa15.18■□□□□ 0.02
COL6A2-202ENST00000310645 SMIM18P0DKX4 95 aa15.18■□□□□ 0.02
COL6A2-202ENST00000310645 TPP2P29144 1249 aaPredicted RBP15.18■□□□□ 0.02
COL6A2-202ENST00000310645 SH3BGRP55822 239 aaPredicted RBP15.18■□□□□ 0.02
COL6A2-202ENST00000310645 KRT76Q01546 638 aa15.18■□□□□ 0.02
COL6A2-202ENST00000310645 ARHGEF16Q5VV41 709 aa15.18■□□□□ 0.02
COL6A2-202ENST00000310645 PDPK2PQ6A1A2 396 aa15.18■□□□□ 0.02
COL6A2-202ENST00000310645 SCYL2Q6P3W7 929 aa15.18■□□□□ 0.02
COL6A2-202ENST00000310645 UNC5AQ6ZN44 842 aa15.18■□□□□ 0.02
COL6A2-202ENST00000310645 PODNQ7Z5L7 613 aa15.18■□□□□ 0.02
COL6A2-202ENST00000310645 MPP5Q8N3R9 675 aa15.18■□□□□ 0.02
COL6A2-202ENST00000310645 METTL25Q8N6Q8 603 aa15.18■□□□□ 0.02
COL6A2-202ENST00000310645 DCUN1D1Q96GG9 259 aa15.18■□□□□ 0.02
COL6A2-202ENST00000310645 NGLY1Q96IV0 654 aa15.18■□□□□ 0.02
COL6A2-202ENST00000310645 PRICKLE1Q96MT3 831 aaPredicted RBP15.18■□□□□ 0.02
COL6A2-202ENST00000310645 USP29Q9HBJ7 922 aa15.18■□□□□ 0.02
COL6A2-202ENST00000310645 GPATCH2LQ9NWQ4 482 aa15.18■□□□□ 0.02
COL6A2-202ENST00000310645 STRCQ7RTU9 1775 aa15.18■□□□□ 0.02
COL6A2-202ENST00000310645 SPDYE2BA6NHP3 402 aa15.18■□□□□ 0.02
COL6A2-202ENST00000310645 AIM2O14862 343 aa15.18■□□□□ 0.02
COL6A2-202ENST00000310645 APOEP02649 317 aa15.18■□□□□ 0.02
COL6A2-202ENST00000310645 SPDYE6P0CI01 402 aa15.18■□□□□ 0.02
COL6A2-202ENST00000310645 TSHRP16473 764 aa15.18■□□□□ 0.02
COL6A2-202ENST00000310645 ITGAXP20702 1163 aa15.18■□□□□ 0.02
COL6A2-202ENST00000310645 RBL1P28749 1068 aa15.18■□□□□ 0.02
COL6A2-202ENST00000310645 PGM5Q15124 567 aa15.18■□□□□ 0.02
COL6A2-202ENST00000310645 SPDYE2Q495Y8 402 aa15.18■□□□□ 0.02
COL6A2-202ENST00000310645 MEX3CQ5U5Q3 659 aaKnown RBP15.18■□□□□ 0.02
COL6A2-202ENST00000310645 PPP1R2P3Q6NXS1 205 aa15.18■□□□□ 0.02
COL6A2-202ENST00000310645 FAM160B2Q86V87 743 aa15.18■□□□□ 0.02
COL6A2-202ENST00000310645 ZFP28Q8NHY6 868 aa15.18■□□□□ 0.02
COL6A2-202ENST00000310645 DEPTORQ8TB45 409 aa15.18■□□□□ 0.02
COL6A2-202ENST00000310645 CLEC4DQ8WXI8 215 aa15.18■□□□□ 0.02
COL6A2-202ENST00000310645 POPDC2Q9HBU9 364 aa15.18■□□□□ 0.02
COL6A2-202ENST00000310645 TMEM165Q9HC07 324 aa15.18■□□□□ 0.02
COL6A2-202ENST00000310645 PTTG2Q9NZH5 202 aa15.18■□□□□ 0.02
COL6A2-202ENST00000310645 SIPA1L1O43166 1804 aa15.18■□□□□ 0.02
COL6A2-202ENST00000310645 CFLARO15519 480 aa15.18■□□□□ 0.02
COL6A2-202ENST00000310645 GRAP2O75791 330 aa15.18■□□□□ 0.02
COL6A2-202ENST00000310645 ICAM1P05362 532 aa15.18■□□□□ 0.02
COL6A2-202ENST00000310645 TNFSF9P41273 254 aa15.18■□□□□ 0.02
COL6A2-202ENST00000310645 HPCAP84074 193 aa15.18■□□□□ 0.02
COL6A2-202ENST00000310645 DACT2Q5SW24 774 aa15.18■□□□□ 0.02
COL6A2-202ENST00000310645 BSPRYQ5W0U4 402 aa15.18■□□□□ 0.02
COL6A2-202ENST00000310645 PPP4R1Q8TF05 950 aa15.18■□□□□ 0.02
COL6A2-202ENST00000310645 TFB1MQ8WVM0 346 aaKnown RBP15.18■□□□□ 0.02
COL6A2-202ENST00000310645 NDUFA13Q9P0J0 144 aa15.18■□□□□ 0.02
COL6A2-202ENST00000310645 FEM1BQ9UK73 627 aa15.18■□□□□ 0.02
COL6A2-202ENST00000310645 CTDP1Q9Y5B0 961 aaPredicted RBP15.18■□□□□ 0.02
COL6A2-202ENST00000310645 HMX2A2RU54 273 aa15.17■□□□□ 0.02
COL6A2-202ENST00000310645 PDLIM1O00151 329 aa15.17■□□□□ 0.02
COL6A2-202ENST00000310645 MAGEB3O15480 346 aa15.17■□□□□ 0.02
COL6A2-202ENST00000310645 HNRNPCP07910 306 aaKnown RBP eCLIP15.17■□□□□ 0.02
COL6A2-202ENST00000310645 SFNP31947 248 aa15.17■□□□□ 0.02
COL6A2-202ENST00000310645 RAP1GAPP47736 663 aa15.17■□□□□ 0.02
COL6A2-202ENST00000310645 MRPS22P82650 360 aaKnown RBP15.17■□□□□ 0.02
COL6A2-202ENST00000310645 TFAMQ00059 246 aaKnown RBP15.17■□□□□ 0.02
COL6A2-202ENST00000310645 TAP1Q03518 808 aa15.17■□□□□ 0.02
COL6A2-202ENST00000310645 ACAP1Q15027 740 aa15.17■□□□□ 0.02
COL6A2-202ENST00000310645 MYLK3Q32MK0 819 aa15.17■□□□□ 0.02
COL6A2-202ENST00000310645 ACBD5Q5T8D3 534 aaPredicted RBP15.17■□□□□ 0.02
COL6A2-202ENST00000310645 TEDDM1Q5T9Z0 273 aa15.17■□□□□ 0.02
COL6A2-202ENST00000310645 WDR78Q5VTH9 848 aa15.17■□□□□ 0.02
COL6A2-202ENST00000310645 MCPH1Q8NEM0 835 aa15.17■□□□□ 0.02
COL6A2-202ENST00000310645 CGRRF1Q99675 332 aa15.17■□□□□ 0.02
COL6A2-202ENST00000310645 MRPL1Q9BYD6 325 aaKnown RBP15.17■□□□□ 0.02
COL6A2-202ENST00000310645 ARHGAP28Q9P2N2 729 aa15.17■□□□□ 0.02
COL6A2-202ENST00000310645 CYTH4Q9UIA0 394 aa15.17■□□□□ 0.02
COL6A2-202ENST00000310645 USP18Q9UMW8 372 aa15.17■□□□□ 0.02
COL6A2-202ENST00000310645 RPS6KL1Q9Y6S9 549 aa15.17■□□□□ 0.02
COL6A2-202ENST00000310645 DGAT1O75907 488 aa15.17■□□□□ 0.02
COL6A2-202ENST00000310645 ZBED1O96006 694 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms