RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 BNIP1Q12981 228 aa11.98□□□□□ -0.49
PTPN2-201ENST00000309660 HEATR6Q6AI08 1181 aaKnown RBP11.98□□□□□ -0.49
PTPN2-201ENST00000309660 FAM228AQ86W67 206 aa11.98□□□□□ -0.49
PTPN2-201ENST00000309660 GRAMD1AQ96CP6 724 aa11.98□□□□□ -0.49
PTPN2-201ENST00000309660 LGMNQ99538 433 aa11.98□□□□□ -0.49
PTPN2-201ENST00000309660 SLC4A5Q9BY07 1137 aa11.98□□□□□ -0.49
PTPN2-201ENST00000309660 ADAMTS10Q9H324 1103 aa11.98□□□□□ -0.49
PTPN2-201ENST00000309660 UBQLN1Q9UMX0 589 aaKnown RBP11.98□□□□□ -0.49
PTPN2-201ENST00000309660 CXorf49A8MYA2 514 aaPredicted RBP11.98□□□□□ -0.49
PTPN2-201ENST00000309660 ZWINTO95229 277 aa11.98□□□□□ -0.49
PTPN2-201ENST00000309660 DARSP14868 501 aaKnown RBP11.98□□□□□ -0.49
PTPN2-201ENST00000309660 IGFBP6P24592 240 aaPredicted RBP11.98□□□□□ -0.49
PTPN2-201ENST00000309660 SULT1E1P49888 294 aa11.98□□□□□ -0.49
PTPN2-201ENST00000309660 GSCP56915 257 aaPredicted RBP11.98□□□□□ -0.49
PTPN2-201ENST00000309660 ZBTB16Q05516 673 aa11.98□□□□□ -0.49
PTPN2-201ENST00000309660 SOX4Q06945 474 aaPredicted RBP11.98□□□□□ -0.49
PTPN2-201ENST00000309660 BST2Q10589 180 aaKnown RBP11.98□□□□□ -0.49
PTPN2-201ENST00000309660 MROH9Q5TGP6 573 aa11.98□□□□□ -0.49
PTPN2-201ENST00000309660 TMEM110Q86TL2 294 aa11.98□□□□□ -0.49
PTPN2-201ENST00000309660 TLK2Q86UE8 772 aa11.98□□□□□ -0.49
PTPN2-201ENST00000309660 AGGF1Q8N302 714 aaeCLIP11.98□□□□□ -0.49
PTPN2-201ENST00000309660 RNF169Q8NCN4 708 aa11.98□□□□□ -0.49
PTPN2-201ENST00000309660 PTPRN2Q92932 1015 aa11.98□□□□□ -0.49
PTPN2-201ENST00000309660 TACO1Q9BSH4 297 aaKnown RBP11.98□□□□□ -0.49
PTPN2-201ENST00000309660 PRKAG3Q9UGI9 489 aa11.98□□□□□ -0.49
PTPN2-201ENST00000309660 USH1CQ9Y6N9 552 aa11.98□□□□□ -0.49
PTPN2-201ENST00000309660 C2orf71A6NGG8 1288 aa11.98□□□□□ -0.49
PTPN2-201ENST00000309660 BCAT1P54687 386 aa11.98□□□□□ -0.49
PTPN2-201ENST00000309660 SNX16P57768 344 aa11.98□□□□□ -0.49
PTPN2-201ENST00000309660 SESN2P58004 480 aaPredicted RBP11.98□□□□□ -0.49
PTPN2-201ENST00000309660 AP1B1Q10567 949 aa11.98□□□□□ -0.49
PTPN2-201ENST00000309660 SLC10A2Q12908 348 aaPredicted RBP11.98□□□□□ -0.49
PTPN2-201ENST00000309660 KCNJ11Q14654 390 aa11.98□□□□□ -0.49
PTPN2-201ENST00000309660 NT5DC4Q86YG4 428 aa11.98□□□□□ -0.49
PTPN2-201ENST00000309660 DEFB106AQ8N104 65 aa11.98□□□□□ -0.49
PTPN2-201ENST00000309660 MPP5Q8N3R9 675 aa11.98□□□□□ -0.49
PTPN2-201ENST00000309660 CHKBQ9Y259 395 aa11.98□□□□□ -0.49
PTPN2-201ENST00000309660 TEX264Q9Y6I9 313 aa11.98□□□□□ -0.49
PTPN2-201ENST00000309660 LOC285556D6RIA3 1793 aa11.97□□□□□ -0.49
PTPN2-201ENST00000309660 RRN3P2A6NIE6 340 aa11.97□□□□□ -0.49
PTPN2-201ENST00000309660 E7ESA3 106 aa11.97□□□□□ -0.49
PTPN2-201ENST00000309660 COPEO14579 308 aa11.97□□□□□ -0.49
PTPN2-201ENST00000309660 GPR32O75388 356 aa11.97□□□□□ -0.49
PTPN2-201ENST00000309660 RPSAP08865 295 aaKnown RBP11.97□□□□□ -0.49
PTPN2-201ENST00000309660 CTSHP09668 335 aa11.97□□□□□ -0.49
PTPN2-201ENST00000309660 TROVE2P10155 538 aaKnown RBP eCLIP11.97□□□□□ -0.49
PTPN2-201ENST00000309660 BGNP21810 368 aa11.97□□□□□ -0.49
PTPN2-201ENST00000309660 ARL4AP40617 200 aa11.97□□□□□ -0.49
PTPN2-201ENST00000309660 NDUFV1P49821 464 aa11.97□□□□□ -0.49
PTPN2-201ENST00000309660 HIC1Q14526 733 aa11.97□□□□□ -0.49
PTPN2-201ENST00000309660 CCL14Q16627 93 aa11.97□□□□□ -0.49
PTPN2-201ENST00000309660 TRMT10BQ6PF06 316 aaKnown RBP11.97□□□□□ -0.49
PTPN2-201ENST00000309660 CTU1Q7Z7A3 348 aaKnown RBP11.97□□□□□ -0.49
PTPN2-201ENST00000309660 PIGZQ86VD9 579 aa11.97□□□□□ -0.49
PTPN2-201ENST00000309660 ADGRF2Q8IZF7 708 aa11.97□□□□□ -0.49
PTPN2-201ENST00000309660 LBHD1Q9BQE6 289 aaPredicted RBP11.97□□□□□ -0.49
PTPN2-201ENST00000309660 MECRQ9BV79 373 aa11.97□□□□□ -0.49
PTPN2-201ENST00000309660 MANSC1Q9H8J5 431 aa11.97□□□□□ -0.49
PTPN2-201ENST00000309660 LRRC4Q9HBW1 653 aa11.97□□□□□ -0.49
PTPN2-201ENST00000309660 STARD13Q9Y3M8 1113 aa11.97□□□□□ -0.49
PTPN2-201ENST00000309660 CFAP73A6NFT4 308 aa11.97□□□□□ -0.49
PTPN2-201ENST00000309660 ENDOD1O94919 500 aa11.97□□□□□ -0.49
PTPN2-201ENST00000309660 TGM2P21980 687 aa11.97□□□□□ -0.49
PTPN2-201ENST00000309660 TKTP29401 623 aaKnown RBP11.97□□□□□ -0.49
PTPN2-201ENST00000309660 TAF6P49848 677 aa11.97□□□□□ -0.49
PTPN2-201ENST00000309660 MFSD10Q14728 455 aa11.97□□□□□ -0.49
PTPN2-201ENST00000309660 SNX17Q15036 470 aa11.97□□□□□ -0.49
PTPN2-201ENST00000309660 UNC5BQ8IZJ1 945 aa11.97□□□□□ -0.49
PTPN2-201ENST00000309660 FAXDC2Q96IV6 333 aa11.97□□□□□ -0.49
PTPN2-201ENST00000309660 PLEKHA5Q9HAU0 1116 aa11.97□□□□□ -0.49
PTPN2-201ENST00000309660 ZMYND8Q9ULU4 1186 aaPredicted RBP11.97□□□□□ -0.49
PTPN2-201ENST00000309660 MRPL42Q9Y6G3 142 aaKnown RBP11.97□□□□□ -0.49
PTPN2-201ENST00000309660 BRCA2P51587 3418 aa11.97□□□□□ -0.49
PTPN2-201ENST00000309660 NRCAMQ92823 1304 aa11.97□□□□□ -0.49
PTPN2-201ENST00000309660 LRRC37A2A6NM11 1700 aa11.97□□□□□ -0.49
PTPN2-201ENST00000309660 E2F8A0AVK6 867 aa11.96□□□□□ -0.49
PTPN2-201ENST00000309660 CAPN9O14815 690 aa11.96□□□□□ -0.49
PTPN2-201ENST00000309660 CHADO15335 359 aa11.96□□□□□ -0.49
PTPN2-201ENST00000309660 L1CAMP32004 1257 aa11.96□□□□□ -0.49
PTPN2-201ENST00000309660 SLC8A3P57103 927 aa11.96□□□□□ -0.49
PTPN2-201ENST00000309660 PKDCCQ504Y2 493 aa11.96□□□□□ -0.49
PTPN2-201ENST00000309660 OLFML2BQ68BL8 750 aa11.96□□□□□ -0.49
PTPN2-201ENST00000309660 IQSEC1Q6DN90 963 aa11.96□□□□□ -0.49
PTPN2-201ENST00000309660 NLRP9Q7RTR0 991 aa11.96□□□□□ -0.49
PTPN2-201ENST00000309660 MTDHQ86UE4 582 aaKnown RBP11.96□□□□□ -0.49
PTPN2-201ENST00000309660 CDKL3Q8IVW4 592 aaPredicted RBP11.96□□□□□ -0.49
PTPN2-201ENST00000309660 ANKLE1Q8NAG6 615 aa11.96□□□□□ -0.49
PTPN2-201ENST00000309660 ANKRD52Q8NB46 1076 aa11.96□□□□□ -0.49
PTPN2-201ENST00000309660 RFWD2Q8NHY2 731 aa11.96□□□□□ -0.49
PTPN2-201ENST00000309660 KBTBD7Q8WVZ9 684 aa11.96□□□□□ -0.49
PTPN2-201ENST00000309660 CSPG4P5Q96PW8 444 aa11.96□□□□□ -0.49
PTPN2-201ENST00000309660 KCTD15Q96SI1 283 aaPredicted RBP11.96□□□□□ -0.49
PTPN2-201ENST00000309660 PTPN18Q99952 460 aa11.96□□□□□ -0.49
PTPN2-201ENST00000309660 PCMTD2Q9NV79 361 aa11.96□□□□□ -0.49
PTPN2-201ENST00000309660 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.96□□□□□ -0.49
PTPN2-201ENST00000309660 SLC17A6Q9P2U8 582 aa11.96□□□□□ -0.49
PTPN2-201ENST00000309660 MARCOQ9UEW3 520 aaPredicted RBP11.96□□□□□ -0.49
PTPN2-201ENST00000309660 LOC102724159A0A0B4J2E5 919 aa11.96□□□□□ -0.49
PTPN2-201ENST00000309660 MEIS3P2A8K0S8 358 aa11.96□□□□□ -0.49
PTPN2-201ENST00000309660 MGRN1O60291 552 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms