RNA–Protein interactions for RNA: ENST00000308783.9

KDM2A-201, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best) BASIC

Gene KDM2A, Length 3,666 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-201ENST00000308783 USP38Q8NB14 1042 aa10.83□□□□□ -0.68
KDM2A-201ENST00000308783 LRRC8CQ8TDW0 803 aa10.83□□□□□ -0.68
KDM2A-201ENST00000308783 APOL6Q9BWW8 343 aa10.83□□□□□ -0.68
KDM2A-201ENST00000308783 IMPG2Q9BZV3 1241 aa10.83□□□□□ -0.68
KDM2A-201ENST00000308783 SDCBP2Q9H190 292 aa10.83□□□□□ -0.68
KDM2A-201ENST00000308783 TSKSQ9UJT2 592 aa10.83□□□□□ -0.68
KDM2A-201ENST00000308783 NOC2LQ9Y3T9 749 aaKnown RBP10.83□□□□□ -0.68
KDM2A-201ENST00000308783 COL1A2P08123 1366 aa10.83□□□□□ -0.68
KDM2A-201ENST00000308783 ARPC4-TTLL3A0A0A6YYG9 625 aa10.83□□□□□ -0.68
KDM2A-201ENST00000308783 TTC34A8MYJ7 566 aa10.83□□□□□ -0.68
KDM2A-201ENST00000308783 RASA4BC9J798 803 aa10.83□□□□□ -0.68
KDM2A-201ENST00000308783 RASA4O43374 803 aa10.83□□□□□ -0.68
KDM2A-201ENST00000308783 B4GALT4O60513 344 aa10.83□□□□□ -0.68
KDM2A-201ENST00000308783 BTKQ06187 659 aa10.83□□□□□ -0.68
KDM2A-201ENST00000308783 DCTN2Q13561 401 aaKnown RBP10.83□□□□□ -0.68
KDM2A-201ENST00000308783 FAM187BQ17R55 369 aa10.83□□□□□ -0.68
KDM2A-201ENST00000308783 ZNF572Q7Z3I7 529 aaPredicted RBP10.83□□□□□ -0.68
KDM2A-201ENST00000308783 ESX1Q8N693 406 aa10.83□□□□□ -0.68
KDM2A-201ENST00000308783 ZNF606Q8WXB4 792 aa10.83□□□□□ -0.68
KDM2A-201ENST00000308783 APBA2Q99767 749 aa10.83□□□□□ -0.68
KDM2A-201ENST00000308783 DDX56Q9NY93 547 aaKnown RBP10.83□□□□□ -0.68
KDM2A-201ENST00000308783 SNTG2Q9NY99 539 aa10.83□□□□□ -0.68
KDM2A-201ENST00000308783 TLDC2A0PJX2 215 aa10.82□□□□□ -0.68
KDM2A-201ENST00000308783 O00370 1275 aa10.82□□□□□ -0.68
KDM2A-201ENST00000308783 TRAPPC3O43617 180 aa10.82□□□□□ -0.68
KDM2A-201ENST00000308783 SHBGP04278 402 aa10.82□□□□□ -0.68
KDM2A-201ENST00000308783 PRKACAP17612 351 aa10.82□□□□□ -0.68
KDM2A-201ENST00000308783 AKAP5P24588 427 aa10.82□□□□□ -0.68
KDM2A-201ENST00000308783 FLT3LGP49771 235 aa10.82□□□□□ -0.68
KDM2A-201ENST00000308783 PSEN2P49810 448 aa10.82□□□□□ -0.68
KDM2A-201ENST00000308783 GLE1Q53GS7 698 aaKnown RBP10.82□□□□□ -0.68
KDM2A-201ENST00000308783 CXCL17Q6UXB2 119 aa10.82□□□□□ -0.68
KDM2A-201ENST00000308783 MCOLN2Q8IZK6 566 aa10.82□□□□□ -0.68
KDM2A-201ENST00000308783 MMGT1Q8N4V1 131 aa10.82□□□□□ -0.68
KDM2A-201ENST00000308783 FLCNQ8NFG4 579 aa10.82□□□□□ -0.68
KDM2A-201ENST00000308783 GIPC3Q8TF64 312 aa10.82□□□□□ -0.68
KDM2A-201ENST00000308783 CHMP6Q96FZ7 201 aa10.82□□□□□ -0.68
KDM2A-201ENST00000308783 ANKRD36BP1Q96IX9 119 aa10.82□□□□□ -0.68
KDM2A-201ENST00000308783 TWNKQ96RR1 684 aa10.82□□□□□ -0.68
KDM2A-201ENST00000308783 DDX47Q9H0S4 455 aaKnown RBP10.82□□□□□ -0.68
KDM2A-201ENST00000308783 SMYD3Q9H7B4 428 aa10.82□□□□□ -0.68
KDM2A-201ENST00000308783 HMGB1P1B2RPK0 211 aaPredicted RBP10.82□□□□□ -0.68
KDM2A-201ENST00000308783 PPEF2O14830 753 aa10.82□□□□□ -0.68
KDM2A-201ENST00000308783 CALB2P22676 271 aa10.82□□□□□ -0.68
KDM2A-201ENST00000308783 POLR2BP30876 1174 aaKnown RBP10.82□□□□□ -0.68
KDM2A-201ENST00000308783 RFC1P35251 1148 aaPredicted RBP10.82□□□□□ -0.68
KDM2A-201ENST00000308783 ETFBP38117 255 aa10.82□□□□□ -0.68
KDM2A-201ENST00000308783 FSCN1Q16658 493 aaKnown RBP10.82□□□□□ -0.68
KDM2A-201ENST00000308783 CCDC81Q6ZN84 652 aa10.82□□□□□ -0.68
KDM2A-201ENST00000308783 RHOT2Q8IXI1 618 aa10.82□□□□□ -0.68
KDM2A-201ENST00000308783 LRRC43Q8N309 656 aa10.82□□□□□ -0.68
KDM2A-201ENST00000308783 UBR7Q8N806 425 aa10.82□□□□□ -0.68
KDM2A-201ENST00000308783 STKLD1Q8NE28 680 aa10.82□□□□□ -0.68
KDM2A-201ENST00000308783 PDZD8Q8NEN9 1154 aa10.82□□□□□ -0.68
KDM2A-201ENST00000308783 SMC6Q96SB8 1091 aa10.82□□□□□ -0.68
KDM2A-201ENST00000308783 NIF3L1Q9GZT8 377 aa10.82□□□□□ -0.68
KDM2A-201ENST00000308783 NXF3Q9H4D5 531 aaKnown RBP10.82□□□□□ -0.68
KDM2A-201ENST00000308783 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.82□□□□□ -0.68
KDM2A-201ENST00000308783 HSFX1Q9UBD0 423 aa10.82□□□□□ -0.68
KDM2A-201ENST00000308783 NRCAMQ92823 1304 aa10.82□□□□□ -0.68
KDM2A-201ENST00000308783 TJP3O95049 919 aa10.82□□□□□ -0.68
KDM2A-201ENST00000308783 TNNC2P02585 160 aa10.82□□□□□ -0.68
KDM2A-201ENST00000308783 FGGP02679 453 aa10.82□□□□□ -0.68
KDM2A-201ENST00000308783 PRKCZQ05513 592 aa10.82□□□□□ -0.68
KDM2A-201ENST00000308783 LIN52Q52LA3 116 aa10.82□□□□□ -0.68
KDM2A-201ENST00000308783 C8orf74Q6P047 294 aa10.82□□□□□ -0.68
KDM2A-201ENST00000308783 CATSPER4Q7RTX7 472 aa10.82□□□□□ -0.68
KDM2A-201ENST00000308783 C11orf96Q7Z7L8 435 aa10.82□□□□□ -0.68
KDM2A-201ENST00000308783 SYCE1Q8N0S2 351 aa10.82□□□□□ -0.68
KDM2A-201ENST00000308783 UBLCP1Q8WVY7 318 aaPredicted RBP10.82□□□□□ -0.68
KDM2A-201ENST00000308783 HDAC2Q92769 488 aaKnown RBP10.82□□□□□ -0.68
KDM2A-201ENST00000308783 ARHGEF2Q92974 986 aaKnown RBP10.82□□□□□ -0.68
KDM2A-201ENST00000308783 TUBGCP5Q96RT8 1024 aa10.82□□□□□ -0.68
KDM2A-201ENST00000308783 KLK14Q9P0G3 267 aa10.82□□□□□ -0.68
KDM2A-201ENST00000308783 SEPT10Q9P0V9 454 aa10.82□□□□□ -0.68
KDM2A-201ENST00000308783 TJP2Q9UDY2 1190 aa10.82□□□□□ -0.68
KDM2A-201ENST00000308783 GTF3C4Q9UKN8 822 aa10.82□□□□□ -0.68
KDM2A-201ENST00000308783 LRCH1Q9Y2L9 728 aa10.82□□□□□ -0.68
KDM2A-201ENST00000308783 MROH7Q68CQ1 1323 aa10.82□□□□□ -0.68
KDM2A-201ENST00000308783 ZSCAN5BA6NJL1 495 aa10.81□□□□□ -0.68
KDM2A-201ENST00000308783 IGHA2P01877 340 aa10.81□□□□□ -0.68
KDM2A-201ENST00000308783 CYP1A1P04798 512 aaPredicted RBP10.81□□□□□ -0.68
KDM2A-201ENST00000308783 MCF2P10911 925 aa10.81□□□□□ -0.68
KDM2A-201ENST00000308783 UBL4AP11441 157 aa10.81□□□□□ -0.68
KDM2A-201ENST00000308783 ELNP15502 786 aa10.81□□□□□ -0.68
KDM2A-201ENST00000308783 TCEA1P23193 301 aaKnown RBP10.81□□□□□ -0.68
KDM2A-201ENST00000308783 NCALDP61601 193 aa10.81□□□□□ -0.68
KDM2A-201ENST00000308783 NOMO3P69849 1222 aa10.81□□□□□ -0.68
KDM2A-201ENST00000308783 ADAM17P78536 824 aa10.81□□□□□ -0.68
KDM2A-201ENST00000308783 POU5F1BQ06416 359 aa10.81□□□□□ -0.68
KDM2A-201ENST00000308783 SULT2A1Q06520 285 aa10.81□□□□□ -0.68
KDM2A-201ENST00000308783 RFPL4BQ6ZWI9 263 aa10.81□□□□□ -0.68
KDM2A-201ENST00000308783 DPH6Q7L8W6 267 aa10.81□□□□□ -0.68
KDM2A-201ENST00000308783 RSPH3Q86UC2 560 aa10.81□□□□□ -0.68
KDM2A-201ENST00000308783 GATAD2AQ86YP4 633 aa10.81□□□□□ -0.68
KDM2A-201ENST00000308783 ST13P4Q8IZP2 240 aaPredicted RBP10.81□□□□□ -0.68
KDM2A-201ENST00000308783 GIPC2Q8TF65 315 aa10.81□□□□□ -0.68
KDM2A-201ENST00000308783 AENQ8WTP8 325 aaKnown RBP10.81□□□□□ -0.68
KDM2A-201ENST00000308783 PMEPA1Q969W9 287 aa10.81□□□□□ -0.68
KDM2A-201ENST00000308783 BEGAINQ9BUH8 593 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms