RNA–Protein interactions for RNA: ENST00000307305.12

PHTF2-203, Transcript of putative homeodomain transcription factor 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PHTF2, Length 4,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-203ENST00000307305 RIPOR1Q6ZS17 1223 aa11.72□□□□□ -0.53
PHTF2-203ENST00000307305 ZBTB46Q86UZ6 589 aa11.72□□□□□ -0.53
PHTF2-203ENST00000307305 CCNJLQ8IV13 435 aa11.72□□□□□ -0.53
PHTF2-203ENST00000307305 TMEM192Q8IY95 271 aa11.72□□□□□ -0.53
PHTF2-203ENST00000307305 VCPIP1Q96JH7 1222 aa11.72□□□□□ -0.53
PHTF2-203ENST00000307305 SERPINI1Q99574 410 aa11.72□□□□□ -0.53
PHTF2-203ENST00000307305 CADM1Q9BY67 442 aaKnown RBP11.72□□□□□ -0.53
PHTF2-203ENST00000307305 APOC4-APOC2K7ER74 178 aa11.72□□□□□ -0.53
PHTF2-203ENST00000307305 APOC2P02655 101 aa11.72□□□□□ -0.53
PHTF2-203ENST00000307305 RALBP11234 206 aa11.72□□□□□ -0.53
PHTF2-203ENST00000307305 IL1R2P27930 398 aa11.72□□□□□ -0.53
PHTF2-203ENST00000307305 HSD17B4P51659 736 aa11.72□□□□□ -0.53
PHTF2-203ENST00000307305 TGFB2P61812 414 aa11.72□□□□□ -0.53
PHTF2-203ENST00000307305 HSDL1Q3SXM5 330 aa11.72□□□□□ -0.53
PHTF2-203ENST00000307305 LPCAT4Q643R3 524 aa11.72□□□□□ -0.53
PHTF2-203ENST00000307305 LRRC8EQ6NSJ5 796 aa11.72□□□□□ -0.53
PHTF2-203ENST00000307305 TRMT10BQ6PF06 316 aaKnown RBP11.72□□□□□ -0.53
PHTF2-203ENST00000307305 STKLD1Q8NE28 680 aa11.72□□□□□ -0.53
PHTF2-203ENST00000307305 PRR11Q96HE9 360 aaPredicted RBP11.72□□□□□ -0.53
PHTF2-203ENST00000307305 ARHGEF3Q9NR81 526 aa11.72□□□□□ -0.53
PHTF2-203ENST00000307305 RNF103-CHMP3A0A140T963 221 aa11.72□□□□□ -0.53
PHTF2-203ENST00000307305 TFE3P19532 575 aaPredicted RBP11.72□□□□□ -0.53
PHTF2-203ENST00000307305 TGM2P21980 687 aa11.72□□□□□ -0.53
PHTF2-203ENST00000307305 TPI1P60174 286 aa11.72□□□□□ -0.53
PHTF2-203ENST00000307305 CYP1B1Q16678 543 aa11.72□□□□□ -0.53
PHTF2-203ENST00000307305 STRA8Q7Z7C7 330 aa11.72□□□□□ -0.53
PHTF2-203ENST00000307305 PHF13Q86YI8 300 aaPredicted RBP11.72□□□□□ -0.53
PHTF2-203ENST00000307305 AFAP1L2Q8N4X5 818 aa11.72□□□□□ -0.53
PHTF2-203ENST00000307305 PTPRN2Q92932 1015 aa11.72□□□□□ -0.53
PHTF2-203ENST00000307305 EME1Q96AY2 570 aa11.72□□□□□ -0.53
PHTF2-203ENST00000307305 FSD1LQ9BXM9 530 aa11.72□□□□□ -0.53
PHTF2-203ENST00000307305 RHBDL2Q9NX52 303 aa11.72□□□□□ -0.53
PHTF2-203ENST00000307305 TAGLN3Q9UI15 199 aa11.72□□□□□ -0.53
PHTF2-203ENST00000307305 MARF1Q9Y4F3 1742 aaKnown RBP11.72□□□□□ -0.53
PHTF2-203ENST00000307305 LAMB4A4D0S4 1761 aa11.72□□□□□ -0.53
PHTF2-203ENST00000307305 CACNA1SQ13698 1873 aa11.72□□□□□ -0.53
PHTF2-203ENST00000307305 KPNA7A9QM74 516 aa11.72□□□□□ -0.53
PHTF2-203ENST00000307305 NOL3O60936 208 aaKnown RBP11.72□□□□□ -0.53
PHTF2-203ENST00000307305 ASS1P00966 412 aaKnown RBP11.72□□□□□ -0.53
PHTF2-203ENST00000307305 ERBB2P04626 1255 aa11.72□□□□□ -0.53
PHTF2-203ENST00000307305 CTSHP09668 335 aa11.72□□□□□ -0.53
PHTF2-203ENST00000307305 INSRRP14616 1297 aa11.72□□□□□ -0.53
PHTF2-203ENST00000307305 GMPRP36959 345 aa11.72□□□□□ -0.53
PHTF2-203ENST00000307305 PPM1JQ5JR12 505 aa11.72□□□□□ -0.53
PHTF2-203ENST00000307305 WASHC2DQ5SRD0 308 aa11.72□□□□□ -0.53
PHTF2-203ENST00000307305 RNASEH2BQ5TBB1 312 aaKnown RBP11.72□□□□□ -0.53
PHTF2-203ENST00000307305 RBM15BQ8NDT2 890 aaKnown RBP11.72□□□□□ -0.53
PHTF2-203ENST00000307305 BEST2Q8NFU1 509 aa11.72□□□□□ -0.53
PHTF2-203ENST00000307305 N4BP2Q86UW6 1770 aaPredicted RBP11.72□□□□□ -0.53
PHTF2-203ENST00000307305 PHGDHO43175 533 aaKnown RBP11.71□□□□□ -0.53
PHTF2-203ENST00000307305 CCDC130P13994 396 aa11.71□□□□□ -0.53
PHTF2-203ENST00000307305 GRIA1P42261 906 aa11.71□□□□□ -0.53
PHTF2-203ENST00000307305 SLC1A6P48664 564 aa11.71□□□□□ -0.53
PHTF2-203ENST00000307305 GBE1Q04446 702 aa11.71□□□□□ -0.53
PHTF2-203ENST00000307305 TMPRSS6Q8IU80 811 aa11.71□□□□□ -0.53
PHTF2-203ENST00000307305 EDEM1Q92611 657 aa11.71□□□□□ -0.53
PHTF2-203ENST00000307305 CHST12Q9NRB3 414 aa11.71□□□□□ -0.53
PHTF2-203ENST00000307305 PNPOQ9NVS9 261 aa11.71□□□□□ -0.53
PHTF2-203ENST00000307305 TAS2R1Q9NYW7 299 aa11.71□□□□□ -0.53
PHTF2-203ENST00000307305 HMGXB4Q9UGU5 601 aa11.71□□□□□ -0.53
PHTF2-203ENST00000307305 LRCH1Q9Y2L9 728 aa11.71□□□□□ -0.53
PHTF2-203ENST00000307305 PHRF1Q9P1Y6 1649 aaKnown RBP11.71□□□□□ -0.53
PHTF2-203ENST00000307305 MAGEA13PA6NCF6 341 aa11.71□□□□□ -0.53
PHTF2-203ENST00000307305 C2CD2LO14523 706 aa11.71□□□□□ -0.53
PHTF2-203ENST00000307305 TPBGLP0DKB5 382 aa11.71□□□□□ -0.53
PHTF2-203ENST00000307305 RABGGTBP53611 331 aa11.71□□□□□ -0.53
PHTF2-203ENST00000307305 FLOT2Q14254 428 aa11.71□□□□□ -0.53
PHTF2-203ENST00000307305 ACSBG2Q5FVE4 666 aa11.71□□□□□ -0.53
PHTF2-203ENST00000307305 FAM183BPQ6ZVS7 135 aa11.71□□□□□ -0.53
PHTF2-203ENST00000307305 ZC3H3Q8IXZ2 948 aaKnown RBP11.71□□□□□ -0.53
PHTF2-203ENST00000307305 TFB1MQ8WVM0 346 aaKnown RBP11.71□□□□□ -0.53
PHTF2-203ENST00000307305 CATSPER2Q96P56 530 aa11.71□□□□□ -0.53
PHTF2-203ENST00000307305 TMEM109Q9BVC6 243 aa11.71□□□□□ -0.53
PHTF2-203ENST00000307305 IARS2Q9NSE4 1012 aaKnown RBP11.71□□□□□ -0.53
PHTF2-203ENST00000307305 SNTG2Q9NY99 539 aa11.71□□□□□ -0.53
PHTF2-203ENST00000307305 CLIC5Q9NZA1 410 aa11.71□□□□□ -0.53
PHTF2-203ENST00000307305 BCAP29Q9UHQ4 241 aa11.71□□□□□ -0.53
PHTF2-203ENST00000307305 RABGEF1Q9UJ41 708 aa11.71□□□□□ -0.53
PHTF2-203ENST00000307305 DYNC1LI2O43237 492 aaPredicted RBP11.71□□□□□ -0.54
PHTF2-203ENST00000307305 POLBP06746 335 aa11.71□□□□□ -0.54
PHTF2-203ENST00000307305 PTGER2P43116 358 aa11.71□□□□□ -0.54
PHTF2-203ENST00000307305 NUP93Q8N1F7 819 aa11.71□□□□□ -0.54
PHTF2-203ENST00000307305 RDM1Q8NG50 284 aa11.71□□□□□ -0.54
PHTF2-203ENST00000307305 DIS3LQ8TF46 1054 aaKnown RBP11.71□□□□□ -0.54
PHTF2-203ENST00000307305 CD101Q93033 1021 aa11.71□□□□□ -0.54
PHTF2-203ENST00000307305 LRMDAQ9H2I8 198 aa11.71□□□□□ -0.54
PHTF2-203ENST00000307305 CAAP1Q9H8G2 361 aa11.71□□□□□ -0.54
PHTF2-203ENST00000307305 NUDT5Q9UKK9 219 aa11.71□□□□□ -0.54
PHTF2-203ENST00000307305 SMCHD1A6NHR9 2005 aa11.71□□□□□ -0.54
PHTF2-203ENST00000307305 SIGLEC16A6NMB1 481 aa11.71□□□□□ -0.54
PHTF2-203ENST00000307305 EEF2KO00418 725 aaKnown RBP11.71□□□□□ -0.54
PHTF2-203ENST00000307305 HNRNPCL1O60812 293 aaKnown RBP11.71□□□□□ -0.54
PHTF2-203ENST00000307305 JCHAINP01591 159 aa11.71□□□□□ -0.54
PHTF2-203ENST00000307305 ACADSP16219 412 aa11.71□□□□□ -0.54
PHTF2-203ENST00000307305 STX1BP61266 288 aa11.71□□□□□ -0.54
PHTF2-203ENST00000307305 TNFAIP2Q03169 654 aa11.71□□□□□ -0.54
PHTF2-203ENST00000307305 MGAT5Q09328 741 aa11.71□□□□□ -0.54
PHTF2-203ENST00000307305 PDPK2PQ6A1A2 396 aa11.71□□□□□ -0.54
PHTF2-203ENST00000307305 BBS12Q6ZW61 710 aa11.71□□□□□ -0.54
PHTF2-203ENST00000307305 INPP5DQ92835 1189 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms