RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 HDAC7Q8WUI4 952 aa18.26■□□□□ 0.51
KRT28-201ENST00000306658 EDEM1Q92611 657 aa18.26■□□□□ 0.51
KRT28-201ENST00000306658 HERPUD2Q9BSE4 406 aa18.26■□□□□ 0.51
KRT28-201ENST00000306658 MAK16Q9BXY0 300 aaKnown RBP18.26■□□□□ 0.51
KRT28-201ENST00000306658 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.26■□□□□ 0.51
KRT28-201ENST00000306658 PCYOX1Q9UHG3 505 aa18.26■□□□□ 0.51
KRT28-201ENST00000306658 FEZ2Q9UHY8 353 aaPredicted RBP18.26■□□□□ 0.51
KRT28-201ENST00000306658 DMGDHQ9UI17 866 aaKnown RBP18.26■□□□□ 0.51
KRT28-201ENST00000306658 SYNJ2BP-COX16A0A087WUM0 186 aa18.25■□□□□ 0.51
KRT28-201ENST00000306658 ABLIM3O94929 683 aa18.25■□□□□ 0.51
KRT28-201ENST00000306658 HEXIM1O94992 359 aaKnown RBP18.25■□□□□ 0.51
KRT28-201ENST00000306658 H2AFXP16104 143 aaPredicted RBP18.25■□□□□ 0.51
KRT28-201ENST00000306658 YWHAQP27348 245 aa18.25■□□□□ 0.51
KRT28-201ENST00000306658 GBP1P32455 592 aa18.25■□□□□ 0.51
KRT28-201ENST00000306658 COILP38432 576 aaPredicted RBP18.25■□□□□ 0.51
KRT28-201ENST00000306658 ARSEP51690 589 aa18.25■□□□□ 0.51
KRT28-201ENST00000306658 ATXN1P54253 815 aaKnown RBP18.25■□□□□ 0.51
KRT28-201ENST00000306658 AIF1P55008 147 aa18.25■□□□□ 0.51
KRT28-201ENST00000306658 PITX1P78337 314 aaPredicted RBP18.25■□□□□ 0.51
KRT28-201ENST00000306658 DR1Q01658 176 aa18.25■□□□□ 0.51
KRT28-201ENST00000306658 CCNG2Q16589 344 aa18.25■□□□□ 0.51
KRT28-201ENST00000306658 OTUD1Q5VV17 481 aaPredicted RBP18.25■□□□□ 0.51
KRT28-201ENST00000306658 FAM131BQ86XD5 332 aa18.25■□□□□ 0.51
KRT28-201ENST00000306658 IFT20Q8IY31 132 aa18.25■□□□□ 0.51
KRT28-201ENST00000306658 CCDC105Q8IYK2 499 aa18.25■□□□□ 0.51
KRT28-201ENST00000306658 SP7Q8TDD2 431 aaPredicted RBP18.25■□□□□ 0.51
KRT28-201ENST00000306658 CRISPLD1Q9H336 500 aa18.25■□□□□ 0.51
KRT28-201ENST00000306658 FAM204AQ9H8W3 233 aa18.25■□□□□ 0.51
KRT28-201ENST00000306658 TMEM51Q9NW97 253 aa18.25■□□□□ 0.51
KRT28-201ENST00000306658 DDIT4Q9NX09 232 aa18.25■□□□□ 0.51
KRT28-201ENST00000306658 COX16Q9P0S2 106 aa18.25■□□□□ 0.51
KRT28-201ENST00000306658 CALCOCO1Q9P1Z2 691 aa18.25■□□□□ 0.51
KRT28-201ENST00000306658 AP4E1Q9UPM8 1137 aa18.25■□□□□ 0.51
KRT28-201ENST00000306658 FAM92AA1XBS5 289 aa18.25■□□□□ 0.51
KRT28-201ENST00000306658 CCDC151A5D8V7 595 aa18.25■□□□□ 0.51
KRT28-201ENST00000306658 ERLIN1O75477 346 aa18.25■□□□□ 0.51
KRT28-201ENST00000306658 SOAT2O75908 522 aa18.25■□□□□ 0.51
KRT28-201ENST00000306658 CD48P09326 243 aa18.25■□□□□ 0.51
KRT28-201ENST00000306658 ATF2P15336 505 aa18.25■□□□□ 0.51
KRT28-201ENST00000306658 VSNL1P62760 191 aa18.25■□□□□ 0.51
KRT28-201ENST00000306658 RAB33AQ14088 237 aa18.25■□□□□ 0.51
KRT28-201ENST00000306658 DPYSL2Q16555 572 aa18.25■□□□□ 0.51
KRT28-201ENST00000306658 ZC3H12AQ5D1E8 599 aaKnown RBP18.25■□□□□ 0.51
KRT28-201ENST00000306658 TTC13Q8NBP0 860 aa18.25■□□□□ 0.51
KRT28-201ENST00000306658 C1orf54Q8WWF1 131 aa18.25■□□□□ 0.51
KRT28-201ENST00000306658 DCLK3Q9C098 648 aa18.25■□□□□ 0.51
KRT28-201ENST00000306658 PIGVQ9NUD9 493 aa18.25■□□□□ 0.51
KRT28-201ENST00000306658 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.25■□□□□ 0.51
KRT28-201ENST00000306658 FNIP2Q9P278 1114 aa18.25■□□□□ 0.51
KRT28-201ENST00000306658 RASAL2Q9UJF2 1139 aa18.25■□□□□ 0.51
KRT28-201ENST00000306658 KIAA1671Q9BY89 1806 aa18.24■□□□□ 0.51
KRT28-201ENST00000306658 FAM187AA6NFU0 413 aa18.24■□□□□ 0.51
KRT28-201ENST00000306658 ZNF487B1APH4 448 aa18.24■□□□□ 0.51
KRT28-201ENST00000306658 TTI1O43156 1089 aa18.24■□□□□ 0.51
KRT28-201ENST00000306658 LINC00271P0C7V0 271 aa18.24■□□□□ 0.51
KRT28-201ENST00000306658 PSEN1P49768 467 aa18.24■□□□□ 0.51
KRT28-201ENST00000306658 TFDP2Q14188 446 aa18.24■□□□□ 0.51
KRT28-201ENST00000306658 DPYSL3Q14195 570 aa18.24■□□□□ 0.51
KRT28-201ENST00000306658 ARL13BQ3SXY8 428 aa18.24■□□□□ 0.51
KRT28-201ENST00000306658 FBXO38Q6PIJ6 1188 aa18.24■□□□□ 0.51
KRT28-201ENST00000306658 BBS12Q6ZW61 710 aa18.24■□□□□ 0.51
KRT28-201ENST00000306658 SCD5Q86SK9 330 aa18.24■□□□□ 0.51
KRT28-201ENST00000306658 RFX6Q8HWS3 928 aa18.24■□□□□ 0.51
KRT28-201ENST00000306658 CCDC185Q8N715 623 aa18.24■□□□□ 0.51
KRT28-201ENST00000306658 KLHL23Q8NBE8 558 aa18.24■□□□□ 0.51
KRT28-201ENST00000306658 FAM71BQ8TC56 605 aa18.24■□□□□ 0.51
KRT28-201ENST00000306658 GPR152Q8TDT2 470 aa18.24■□□□□ 0.51
KRT28-201ENST00000306658 RNF139Q8WU17 664 aa18.24■□□□□ 0.51
KRT28-201ENST00000306658 DHX35Q9H5Z1 703 aaKnown RBP18.24■□□□□ 0.51
KRT28-201ENST00000306658 PCDH18Q9HCL0 1135 aa18.24■□□□□ 0.51
KRT28-201ENST00000306658 EPB41L5Q9HCM4 733 aa18.24■□□□□ 0.51
KRT28-201ENST00000306658 GPATCH2LQ9NWQ4 482 aa18.24■□□□□ 0.51
KRT28-201ENST00000306658 FZD10Q9ULW2 581 aa18.24■□□□□ 0.51
KRT28-201ENST00000306658 MAFFQ9ULX9 164 aa18.24■□□□□ 0.51
KRT28-201ENST00000306658 UTP11Q9Y3A2 253 aaKnown RBP18.24■□□□□ 0.51
KRT28-201ENST00000306658 A0A1W2PQH9 124 aa18.23■□□□□ 0.51
KRT28-201ENST00000306658 CST8O60676 142 aa18.23■□□□□ 0.51
KRT28-201ENST00000306658 ZMYND10O75800 440 aa18.23■□□□□ 0.51
KRT28-201ENST00000306658 CTSAP10619 480 aa18.23■□□□□ 0.51
KRT28-201ENST00000306658 DNAJB2P25686 324 aa18.23■□□□□ 0.51
KRT28-201ENST00000306658 L1CAMP32004 1257 aa18.23■□□□□ 0.51
KRT28-201ENST00000306658 USP46P62068 366 aa18.23■□□□□ 0.51
KRT28-201ENST00000306658 GUCY2DQ02846 1103 aa18.23■□□□□ 0.51
KRT28-201ENST00000306658 ADCY2Q08462 1091 aa18.23■□□□□ 0.51
KRT28-201ENST00000306658 PPP6R3Q5H9R7 873 aaPredicted RBP18.23■□□□□ 0.51
KRT28-201ENST00000306658 TTC27Q6P3X3 843 aa18.23■□□□□ 0.51
KRT28-201ENST00000306658 ATL2Q8NHH9 583 aa18.23■□□□□ 0.51
KRT28-201ENST00000306658 ADAM32Q8TC27 787 aa18.23■□□□□ 0.51
KRT28-201ENST00000306658 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.23■□□□□ 0.51
KRT28-201ENST00000306658 GRK7Q8WTQ7 553 aa18.23■□□□□ 0.51
KRT28-201ENST00000306658 FBXO32Q969P5 355 aa18.23■□□□□ 0.51
KRT28-201ENST00000306658 NTAN1Q96AB6 310 aa18.23■□□□□ 0.51
KRT28-201ENST00000306658 ZNF670Q9BS34 389 aa18.23■□□□□ 0.51
KRT28-201ENST00000306658 FRMD8P1Q9BZ68 369 aaPredicted RBP18.23■□□□□ 0.51
KRT28-201ENST00000306658 RAB17Q9H0T7 212 aa18.23■□□□□ 0.51
KRT28-201ENST00000306658 TLR8Q9NR97 1041 aaKnown RBP18.23■□□□□ 0.51
KRT28-201ENST00000306658 FBXW11Q9UKB1 542 aa18.23■□□□□ 0.51
KRT28-201ENST00000306658 R3HDM2Q9Y2K5 976 aaKnown RBP18.23■□□□□ 0.51
KRT28-201ENST00000306658 RWDD3Q9Y3V2 267 aa18.23■□□□□ 0.51
KRT28-201ENST00000306658 ELF1P32519 619 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms