RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 OR6C75A6NL08 312 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 HAUS5O94927 633 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 VTNP04004 478 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 DEFA1P59665 94 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 DEFA3P59666 94 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 LY6KQ17RY6 165 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 DCLRE1AQ6PJP8 1040 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 C3orf67Q6ZVT6 689 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 DEFB128Q7Z7B8 93 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 LRRC49Q8IUZ0 686 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 GLYCTKQ8IVS8 523 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 OLFM3Q96PB7 478 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 MRPL1Q9BYD6 325 aaKnown RBP8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 KRT84Q9NSB2 600 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 ZNF229Q9UJW7 825 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 MCM3APO60318 1980 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 ARP10275 920 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 ST13P50502 369 aaKnown RBP8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 EIF3EP60228 445 aaKnown RBP8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 SULT2A1Q06520 285 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 HDDC2Q7Z4H3 204 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 PHACTR4Q8IZ21 702 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 TMEM176AQ96HP8 235 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 FDXACB1Q9BRP7 624 aaPredicted RBP8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 AP1M1Q9BXS5 423 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 TOGARAM1Q9Y4F4 1720 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 MYO5AQ9Y4I1 1855 aaKnown RBP8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 LAMB2P55268 1798 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 CYTH3O43739 400 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 PALMO75781 387 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 FXR1P51114 621 aaKnown RBP eCLIP8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 CENPCQ03188 943 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 NOMO2Q5JPE7 1267 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 FAM171A1Q5VUB5 890 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 GPAT2Q6NUI2 795 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 C11orf96Q7Z7L8 435 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 BRSK2Q8IWQ3 736 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 MOSPD2Q8NHP6 518 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 TUBGCP4Q9UGJ1 667 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 DDX20Q9UHI6 824 aaKnown RBP8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 SBF2Q86WG5 1849 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 C2CD2LO14523 706 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 SLC37A4O43826 429 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 MBL2P11226 248 aaPredicted RBP8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 CES1P23141 567 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 MZF1P28698 734 aaPredicted RBP8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 YWHAZP63104 245 aaKnown RBP8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 PLCL1Q15111 1095 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 SLC24A5Q71RS6 500 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 ADCK1Q86TW2 530 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 SPATA18Q8TC71 538 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 FAM162AQ96A26 154 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 ECM29Q5VYK3 1845 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 CYP11B1P15538 503 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 RRM1P23921 792 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 YWHAQP27348 245 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 SLC16A1P53985 500 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 NTRK3Q16288 839 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 METTL16Q86W50 562 aaKnown RBP8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 RIBC1Q8N443 379 aaPredicted RBP8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 ZNF507Q8TCN5 953 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 NOP53Q9NZM5 478 aaKnown RBP8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 CDH9Q9ULB4 789 aa8.59□□□□□ -1.03
PCDHB1-201ENST00000306549 TAF1P21675 1872 aa8.59□□□□□ -1.04
PCDHB1-201ENST00000306549 BCORQ6W2J9 1755 aa8.59□□□□□ -1.04
PCDHB1-201ENST00000306549 GRM3Q14832 879 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 AAK1Q2M2I8 961 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 CTU1Q7Z7A3 348 aaKnown RBP8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 SCN3BQ9NY72 215 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 AURKCQ9UQB9 309 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 DRG1Q9Y295 367 aaKnown RBP8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 UBIAD1Q9Y5Z9 338 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 CDY2AQ9Y6F7 541 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 SALL3Q9BXA9 1300 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 ZNF839A8K0R7 811 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 FARP2O94887 1054 aaPredicted RBP8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 ASS1P00966 412 aaKnown RBP8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 SMIM10L2AP0DMW4 78 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 SMIM10L2BP0DMW5 78 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 COBLL1Q53SF7 1204 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 TFDP3Q5H9I0 405 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 CEP78Q5JTW2 689 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 FBXW10Q5XX13 1052 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 ACAD10Q6JQN1 1059 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 TRMT11Q7Z4G4 463 aaKnown RBP8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 SLFN11Q7Z7L1 901 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 CAMKK1Q8N5S9 505 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 HELQQ8TDG4 1101 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 C2orf15Q8WU43 125 aaKnown RBP8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 TFB1MQ8WVM0 346 aaKnown RBP8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 MTMR12Q9C0I1 747 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 WWP1Q9H0M0 922 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 MYLK2Q9H1R3 596 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 ADNPQ9H2P0 1102 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 CYP4F11Q9HBI6 524 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 KCTD5Q9NXV2 234 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 TBC1D14Q9P2M4 693 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 C10orf71Q711Q0 1435 aa8.58□□□□□ -1.04
PCDHB1-201ENST00000306549 CCDC195A0A1B0GUA6 201 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms