RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 LPIN1Q14693 890 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 ZBTB41Q5SVQ8 909 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 PTRHD1Q6GMV3 140 aaKnown RBP9.58□□□□□ -0.88
PTPRE-202ENST00000306042 TMC5Q6UXY8 1006 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 C1orf127Q8N9H9 656 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 FAM71DQ8N9W8 422 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 CELF6Q96J87 481 aaKnown RBP9.58□□□□□ -0.88
PTPRE-202ENST00000306042 HIST1H2AHQ96KK5 128 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 HIST1H2AJQ99878 128 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 H2AFJQ9BTM1 129 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 AAR2Q9Y312 384 aaKnown RBP9.58□□□□□ -0.88
PTPRE-202ENST00000306042 IGSF6O95976 241 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 JCHAINP01591 159 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 IQCF3P0C7M6 154 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 CYP2F1P24903 491 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 IRX4P78413 519 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 IL9RQ01113 521 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 SLC12A1Q13621 1099 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 SLC10A6Q3KNW5 377 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 TRIM67Q6ZTA4 783 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 VSIG1Q86XK7 387 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 C3orf20Q8ND61 904 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 MCRS1Q96EZ8 462 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 FAM84AQ96KN4 292 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 ZSWIM1Q9BR11 485 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 ACBD6Q9BR61 282 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 ADGRE3Q9BY15 652 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 IKZF4Q9H2S9 585 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 CNGB3Q9NQW8 809 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 WRAP73Q9P2S5 460 aaPredicted RBP9.58□□□□□ -0.88
PTPRE-202ENST00000306042 TRIM10Q9UDY6 481 aa9.58□□□□□ -0.88
PTPRE-202ENST00000306042 OPLAHO14841 1288 aa9.57□□□□□ -0.88
PTPRE-202ENST00000306042 PHF2O75151 1096 aa9.57□□□□□ -0.88
PTPRE-202ENST00000306042 TKTP29401 623 aaKnown RBP9.57□□□□□ -0.88
PTPRE-202ENST00000306042 MYCBPAPQ8TBZ2 947 aa9.57□□□□□ -0.88
PTPRE-202ENST00000306042 CALML6Q8TD86 181 aa9.57□□□□□ -0.88
PTPRE-202ENST00000306042 PTPRN2Q92932 1015 aa9.57□□□□□ -0.88
PTPRE-202ENST00000306042 TMEM175Q9BSA9 504 aa9.57□□□□□ -0.88
PTPRE-202ENST00000306042 TBC1D14Q9P2M4 693 aa9.57□□□□□ -0.88
PTPRE-202ENST00000306042 SCN7AQ01118 1682 aa9.57□□□□□ -0.88
PTPRE-202ENST00000306042 GOLGA8KD6RF30 607 aa9.57□□□□□ -0.88
PTPRE-202ENST00000306042 EBAG9O00559 213 aa9.57□□□□□ -0.88
PTPRE-202ENST00000306042 BAIAP3O94812 1187 aa9.57□□□□□ -0.88
PTPRE-202ENST00000306042 MAP7Q14244 749 aa9.57□□□□□ -0.88
PTPRE-202ENST00000306042 UGP2Q16851 508 aa9.57□□□□□ -0.88
PTPRE-202ENST00000306042 PPP1R26Q5T8A7 1209 aaPredicted RBP9.57□□□□□ -0.88
PTPRE-202ENST00000306042 MEI1Q5TIA1 1274 aa9.57□□□□□ -0.88
PTPRE-202ENST00000306042 RAP1GAP2Q684P5 730 aa9.57□□□□□ -0.88
PTPRE-202ENST00000306042 KIAA1324Q6UXG2 1013 aaKnown RBP9.57□□□□□ -0.88
PTPRE-202ENST00000306042 CPA6Q8N4T0 437 aa9.57□□□□□ -0.88
PTPRE-202ENST00000306042 CCDC33Q8N5R6 958 aa9.57□□□□□ -0.88
PTPRE-202ENST00000306042 DRC3Q9H069 523 aa9.57□□□□□ -0.88
PTPRE-202ENST00000306042 TLR9Q9NR96 1032 aa9.57□□□□□ -0.88
PTPRE-202ENST00000306042 ZNF510Q9Y2H8 683 aa9.57□□□□□ -0.88
PTPRE-202ENST00000306042 DNAJC25-GNG10A0A024R161 153 aa9.57□□□□□ -0.88
PTPRE-202ENST00000306042 PITPNM1O00562 1244 aa9.57□□□□□ -0.88
PTPRE-202ENST00000306042 NDUFAB1O14561 156 aa9.57□□□□□ -0.88
PTPRE-202ENST00000306042 XPO1O14980 1071 aaKnown RBP9.57□□□□□ -0.88
PTPRE-202ENST00000306042 NDUFS2O75306 463 aa9.57□□□□□ -0.88
PTPRE-202ENST00000306042 SERPINF2P08697 491 aa9.57□□□□□ -0.88
PTPRE-202ENST00000306042 ZNF135P52742 658 aaPredicted RBP9.57□□□□□ -0.88
PTPRE-202ENST00000306042 EIF3BP55884 814 aaKnown RBP9.57□□□□□ -0.88
PTPRE-202ENST00000306042 STX1BP61266 288 aa9.57□□□□□ -0.88
PTPRE-202ENST00000306042 CENPCQ03188 943 aa9.57□□□□□ -0.88
PTPRE-202ENST00000306042 FASTKD1Q53R41 847 aaKnown RBP9.57□□□□□ -0.88
PTPRE-202ENST00000306042 WDR59Q6PJI9 974 aa9.57□□□□□ -0.88
PTPRE-202ENST00000306042 SRRM1Q8IYB3 904 aaKnown RBP9.57□□□□□ -0.88
PTPRE-202ENST00000306042 CHPFQ8IZ52 775 aa9.57□□□□□ -0.88
PTPRE-202ENST00000306042 TBC1D19Q8N5T2 526 aa9.57□□□□□ -0.88
PTPRE-202ENST00000306042 HJURPQ8NCD3 748 aaPredicted RBP9.57□□□□□ -0.88
PTPRE-202ENST00000306042 ING5Q8WYH8 240 aa9.57□□□□□ -0.88
PTPRE-202ENST00000306042 RBAK-RBAKDNI3L0D1 243 aa9.57□□□□□ -0.88
PTPRE-202ENST00000306042 ATG7O95352 703 aa9.57□□□□□ -0.88
PTPRE-202ENST00000306042 SYF2O95926 243 aaKnown RBP9.57□□□□□ -0.88
PTPRE-202ENST00000306042 PHLDB3Q6NSJ2 640 aa9.57□□□□□ -0.88
PTPRE-202ENST00000306042 RNF135Q8IUD6 432 aa9.57□□□□□ -0.88
PTPRE-202ENST00000306042 OMDQ99983 421 aa9.57□□□□□ -0.88
PTPRE-202ENST00000306042 PACSIN1Q9BY11 444 aa9.57□□□□□ -0.88
PTPRE-202ENST00000306042 IRX2Q9BZI1 471 aaPredicted RBP9.57□□□□□ -0.88
PTPRE-202ENST00000306042 RBM22Q9NW64 420 aaKnown RBP eCLIP9.57□□□□□ -0.88
PTPRE-202ENST00000306042 CFAP97Q9P2B7 532 aa9.57□□□□□ -0.88
PTPRE-202ENST00000306042 XPO7Q9UIA9 1087 aaKnown RBP9.57□□□□□ -0.88
PTPRE-202ENST00000306042 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.57□□□□□ -0.88
PTPRE-202ENST00000306042 SQORQ9Y6N5 450 aa9.57□□□□□ -0.88
PTPRE-202ENST00000306042 COPEO14579 308 aa9.56□□□□□ -0.88
PTPRE-202ENST00000306042 FDFT1P37268 417 aa9.56□□□□□ -0.88
PTPRE-202ENST00000306042 TTC31Q49AM3 519 aaPredicted RBP9.56□□□□□ -0.88
PTPRE-202ENST00000306042 TBC1D1Q86TI0 1168 aaPredicted RBP9.56□□□□□ -0.88
PTPRE-202ENST00000306042 CARD9Q9H257 536 aa9.56□□□□□ -0.88
PTPRE-202ENST00000306042 ALG13Q9NP73 1137 aaKnown RBP9.56□□□□□ -0.88
PTPRE-202ENST00000306042 ARHGEF38Q9NXL2 777 aa9.56□□□□□ -0.88
PTPRE-202ENST00000306042 TBL1XO60907 577 aa9.56□□□□□ -0.88
PTPRE-202ENST00000306042 NFATC1O95644 943 aa9.56□□□□□ -0.88
PTPRE-202ENST00000306042 VCLP18206 1134 aa9.56□□□□□ -0.88
PTPRE-202ENST00000306042 SF3A3Q12874 501 aaKnown RBP eCLIP9.56□□□□□ -0.88
PTPRE-202ENST00000306042 PDAP1Q13442 181 aaKnown RBP9.56□□□□□ -0.88
PTPRE-202ENST00000306042 NCAPHQ15003 741 aa9.56□□□□□ -0.88
PTPRE-202ENST00000306042 ACAP1Q15027 740 aa9.56□□□□□ -0.88
PTPRE-202ENST00000306042 COBLL1Q53SF7 1204 aa9.56□□□□□ -0.88
PTPRE-202ENST00000306042 TDRD5Q8NAT2 981 aaKnown RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms