RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 KLRK1P26718 216 aa12.7□□□□□ -0.38
ABCA3-201ENST00000301732 R3HDM1Q15032 1099 aaKnown RBP12.7□□□□□ -0.38
ABCA3-201ENST00000301732 COL23A1Q86Y22 540 aaPredicted RBP12.7□□□□□ -0.38
ABCA3-201ENST00000301732 TRIM48Q8IWZ4 208 aa12.7□□□□□ -0.38
ABCA3-201ENST00000301732 ROPN1BQ9BZX4 212 aaPredicted RBP12.7□□□□□ -0.38
ABCA3-201ENST00000301732 ROPN1Q9HAT0 212 aaPredicted RBP12.7□□□□□ -0.38
ABCA3-201ENST00000301732 MAP3K20Q9NYL2 800 aaKnown RBP12.7□□□□□ -0.38
ABCA3-201ENST00000301732 DUX4Q9UBX2 424 aa12.7□□□□□ -0.38
ABCA3-201ENST00000301732 KLHL20Q9Y2M5 609 aa12.7□□□□□ -0.38
ABCA3-201ENST00000301732 CRYL1Q9Y2S2 319 aa12.7□□□□□ -0.38
ABCA3-201ENST00000301732 PRR36Q9H6K5 1346 aa12.7□□□□□ -0.38
ABCA3-201ENST00000301732 ADAMTS12P58397 1594 aa12.7□□□□□ -0.38
ABCA3-201ENST00000301732 SSU72P8A0A1W2PR75 194 aa12.7□□□□□ -0.38
ABCA3-201ENST00000301732 MGAT4DA6NG13 374 aa12.7□□□□□ -0.38
ABCA3-201ENST00000301732 MED24O75448 989 aa12.7□□□□□ -0.38
ABCA3-201ENST00000301732 RAD23AP54725 363 aa12.7□□□□□ -0.38
ABCA3-201ENST00000301732 KHDRBS2Q5VWX1 349 aaKnown RBP12.7□□□□□ -0.38
ABCA3-201ENST00000301732 RNF44Q7L0R7 432 aa12.7□□□□□ -0.38
ABCA3-201ENST00000301732 ZNF571Q7Z3V5 609 aaPredicted RBP12.7□□□□□ -0.38
ABCA3-201ENST00000301732 C2orf69Q8N8R5 385 aa12.7□□□□□ -0.38
ABCA3-201ENST00000301732 MTMR4Q9NYA4 1195 aa12.7□□□□□ -0.38
ABCA3-201ENST00000301732 TMCC3Q9ULS5 477 aa12.7□□□□□ -0.38
ABCA3-201ENST00000301732 PCDHB2Q9Y5E7 798 aa12.7□□□□□ -0.38
ABCA3-201ENST00000301732 RPS6KA5O75582 802 aa12.7□□□□□ -0.38
ABCA3-201ENST00000301732 IL12RB1P42701 662 aa12.7□□□□□ -0.38
ABCA3-201ENST00000301732 AGAP9Q5VTM2 703 aa12.7□□□□□ -0.38
ABCA3-201ENST00000301732 ELMSAN1Q6PJG2 1045 aa12.7□□□□□ -0.38
ABCA3-201ENST00000301732 STKLD1Q8NE28 680 aa12.7□□□□□ -0.38
ABCA3-201ENST00000301732 C7orf57Q8NEG2 295 aa12.7□□□□□ -0.38
ABCA3-201ENST00000301732 BHLHE22Q8NFJ8 381 aaPredicted RBP12.7□□□□□ -0.38
ABCA3-201ENST00000301732 BPIFB6Q8NFQ5 453 aa12.7□□□□□ -0.38
ABCA3-201ENST00000301732 ENKURQ8TC29 256 aa12.7□□□□□ -0.38
ABCA3-201ENST00000301732 NSUN4Q96CB9 384 aaKnown RBP12.7□□□□□ -0.38
ABCA3-201ENST00000301732 LRRC39Q96DD0 335 aa12.7□□□□□ -0.38
ABCA3-201ENST00000301732 GINS4Q9BRT9 223 aa12.7□□□□□ -0.38
ABCA3-201ENST00000301732 IL1RAPL1Q9NZN1 696 aa12.7□□□□□ -0.38
ABCA3-201ENST00000301732 ZNF222Q9UK12 451 aa12.7□□□□□ -0.38
ABCA3-201ENST00000301732 WBP11Q9Y2W2 641 aaKnown RBP12.7□□□□□ -0.38
ABCA3-201ENST00000301732 FLT1P17948 1338 aa12.7□□□□□ -0.38
ABCA3-201ENST00000301732 ABCC2Q92887 1545 aa12.7□□□□□ -0.38
ABCA3-201ENST00000301732 SLC16A3O15427 465 aaKnown RBP12.7□□□□□ -0.38
ABCA3-201ENST00000301732 STIP1P31948 543 aaKnown RBP12.7□□□□□ -0.38
ABCA3-201ENST00000301732 NUP62P37198 522 aaPredicted RBP12.7□□□□□ -0.38
ABCA3-201ENST00000301732 ATN1P54259 1190 aaPredicted RBP12.7□□□□□ -0.38
ABCA3-201ENST00000301732 SLC25A3Q00325 362 aa12.7□□□□□ -0.38
ABCA3-201ENST00000301732 RBBP4Q09028 425 aa12.7□□□□□ -0.38
ABCA3-201ENST00000301732 STX5Q13190 355 aa12.7□□□□□ -0.38
ABCA3-201ENST00000301732 DPP10Q8N608 796 aa12.7□□□□□ -0.38
ABCA3-201ENST00000301732 TP53INP1Q96A56 240 aa12.7□□□□□ -0.38
ABCA3-201ENST00000301732 FAM120BQ96EK7 910 aaKnown RBP12.7□□□□□ -0.38
ABCA3-201ENST00000301732 CPA3P15088 417 aa12.7□□□□□ -0.38
ABCA3-201ENST00000301732 CALB2P22676 271 aa12.7□□□□□ -0.38
ABCA3-201ENST00000301732 CLCN3P51790 818 aa12.7□□□□□ -0.38
ABCA3-201ENST00000301732 PRKCQQ04759 706 aa12.7□□□□□ -0.38
ABCA3-201ENST00000301732 EFEMP1Q12805 493 aa12.7□□□□□ -0.38
ABCA3-201ENST00000301732 FNDC5Q8NAU1 212 aa12.7□□□□□ -0.38
ABCA3-201ENST00000301732 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.7□□□□□ -0.38
ABCA3-201ENST00000301732 MAGEE2Q8TD90 523 aaPredicted RBP12.7□□□□□ -0.38
ABCA3-201ENST00000301732 TSEN34Q9BSV6 310 aaKnown RBP12.7□□□□□ -0.38
ABCA3-201ENST00000301732 DCLRE1BQ9H816 532 aa12.7□□□□□ -0.38
ABCA3-201ENST00000301732 CYP39A1Q9NYL5 469 aa12.7□□□□□ -0.38
ABCA3-201ENST00000301732 EHD3Q9NZN3 535 aa12.7□□□□□ -0.38
ABCA3-201ENST00000301732 AK5Q9Y6K8 562 aa12.7□□□□□ -0.38
ABCA3-201ENST00000301732 CBX4O00257 560 aa12.69□□□□□ -0.38
ABCA3-201ENST00000301732 CNOT3O75175 753 aaKnown RBP12.69□□□□□ -0.38
ABCA3-201ENST00000301732 SHBGP04278 402 aa12.69□□□□□ -0.38
ABCA3-201ENST00000301732 LBPP18428 481 aa12.69□□□□□ -0.38
ABCA3-201ENST00000301732 PLCL1Q15111 1095 aa12.69□□□□□ -0.38
ABCA3-201ENST00000301732 LDLRAP1Q5SW96 308 aa12.69□□□□□ -0.38
ABCA3-201ENST00000301732 FAM45BPQ6NSW5 357 aa12.69□□□□□ -0.38
ABCA3-201ENST00000301732 TSEN2Q8NCE0 465 aaKnown RBP12.69□□□□□ -0.38
ABCA3-201ENST00000301732 VPS37AQ8NEZ2 397 aa12.69□□□□□ -0.38
ABCA3-201ENST00000301732 TATDN2Q93075 761 aa12.69□□□□□ -0.38
ABCA3-201ENST00000301732 PGLYRP2Q96PD5 576 aa12.69□□□□□ -0.38
ABCA3-201ENST00000301732 ACP6Q9NPH0 428 aa12.69□□□□□ -0.38
ABCA3-201ENST00000301732 SCUBE2Q9NQ36 999 aa12.69□□□□□ -0.38
ABCA3-201ENST00000301732 CLOCKO15516 846 aa12.69□□□□□ -0.38
ABCA3-201ENST00000301732 MCRS1Q96EZ8 462 aa12.69□□□□□ -0.38
ABCA3-201ENST00000301732 TBATAQ96M53 351 aa12.69□□□□□ -0.38
ABCA3-201ENST00000301732 RHBGQ9H310 441 aa12.69□□□□□ -0.38
ABCA3-201ENST00000301732 TMEM8AQ9HCN3 771 aa12.69□□□□□ -0.38
ABCA3-201ENST00000301732 C2CD2Q9Y426 696 aa12.69□□□□□ -0.38
ABCA3-201ENST00000301732 C2orf71A6NGG8 1288 aa12.69□□□□□ -0.38
ABCA3-201ENST00000301732 FCHO1O14526 889 aa12.69□□□□□ -0.38
ABCA3-201ENST00000301732 HNRNPRO43390 633 aaKnown RBP12.69□□□□□ -0.38
ABCA3-201ENST00000301732 ZNF543Q08ER8 600 aa12.69□□□□□ -0.38
ABCA3-201ENST00000301732 WDR93Q6P2C0 686 aa12.69□□□□□ -0.38
ABCA3-201ENST00000301732 TMEM26Q6ZUK4 368 aa12.69□□□□□ -0.38
ABCA3-201ENST00000301732 SNX32Q86XE0 403 aa12.69□□□□□ -0.38
ABCA3-201ENST00000301732 SEMA6BQ9H3T3 888 aa12.69□□□□□ -0.38
ABCA3-201ENST00000301732 PLA2G4CQ9UP65 541 aa12.69□□□□□ -0.38
ABCA3-201ENST00000301732 CASTOR2A6NHX0 329 aa12.69□□□□□ -0.38
ABCA3-201ENST00000301732 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.69□□□□□ -0.38
ABCA3-201ENST00000301732 TRIM3O75382 744 aaPredicted RBP12.69□□□□□ -0.38
ABCA3-201ENST00000301732 CYP4B1P13584 511 aa12.69□□□□□ -0.38
ABCA3-201ENST00000301732 FUT4P22083 530 aa12.69□□□□□ -0.38
ABCA3-201ENST00000301732 MGAT1P26572 445 aa12.69□□□□□ -0.38
ABCA3-201ENST00000301732 RPA3P35244 121 aaPredicted RBP12.69□□□□□ -0.38
ABCA3-201ENST00000301732 HARS2P49590 506 aaKnown RBP12.69□□□□□ -0.38
ABCA3-201ENST00000301732 SCNN1BP51168 640 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms