RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 FAM149B1Q96BN6 582 aa22.79■■□□□ 1.24
TPM4-201ENST00000300933 CCDC77Q9BR77 488 aa22.79■■□□□ 1.24
TPM4-201ENST00000300933 ARL2BPQ9Y2Y0 163 aa22.79■■□□□ 1.24
TPM4-201ENST00000300933 KCNN4O15554 427 aa22.79■■□□□ 1.24
TPM4-201ENST00000300933 MLH1P40692 756 aa22.79■■□□□ 1.24
TPM4-201ENST00000300933 ABL2P42684 1182 aa22.79■■□□□ 1.24
TPM4-201ENST00000300933 TAF11Q15544 211 aa22.79■■□□□ 1.24
TPM4-201ENST00000300933 PKN2Q16513 984 aaKnown RBP22.79■■□□□ 1.24
TPM4-201ENST00000300933 IGDCC3Q8IVU1 814 aa22.79■■□□□ 1.24
TPM4-201ENST00000300933 PPIL6Q8IXY8 311 aa22.79■■□□□ 1.24
TPM4-201ENST00000300933 C4orf33Q8N1A6 199 aa22.79■■□□□ 1.24
TPM4-201ENST00000300933 ANKRD52Q8NB46 1076 aa22.79■■□□□ 1.24
TPM4-201ENST00000300933 CLUHO75153 1309 aa22.79■■□□□ 1.24
TPM4-201ENST00000300933 ALOX15BO15296 676 aa22.78■■□□□ 1.24
TPM4-201ENST00000300933 HUS1O60921 280 aa22.78■■□□□ 1.24
TPM4-201ENST00000300933 ENDOD1O94919 500 aa22.78■■□□□ 1.24
TPM4-201ENST00000300933 RBL1P28749 1068 aa22.78■■□□□ 1.24
TPM4-201ENST00000300933 BIRC2Q13490 618 aa22.78■■□□□ 1.24
TPM4-201ENST00000300933 NBPF20Q3BBV1 942 aa22.78■■□□□ 1.24
TPM4-201ENST00000300933 SAPCD2Q86UD0 394 aa22.78■■□□□ 1.24
TPM4-201ENST00000300933 TTC39CQ8N584 583 aa22.78■■□□□ 1.24
TPM4-201ENST00000300933 CCDC185Q8N715 623 aa22.78■■□□□ 1.24
TPM4-201ENST00000300933 GBP7Q8N8V2 638 aaPredicted RBP22.78■■□□□ 1.24
TPM4-201ENST00000300933 PYROXD1Q8WU10 500 aa22.78■■□□□ 1.24
TPM4-201ENST00000300933 GAD1Q99259 594 aa22.78■■□□□ 1.24
TPM4-201ENST00000300933 SPATS2LQ9NUQ6 558 aaKnown RBP22.78■■□□□ 1.24
TPM4-201ENST00000300933 CDY2AQ9Y6F7 541 aa22.78■■□□□ 1.24
TPM4-201ENST00000300933 CD4P01730 458 aa22.78■■□□□ 1.24
TPM4-201ENST00000300933 BCAR1P56945 870 aa22.78■■□□□ 1.24
TPM4-201ENST00000300933 SARNPP82979 210 aaKnown RBP22.78■■□□□ 1.24
TPM4-201ENST00000300933 BST2Q10589 180 aaKnown RBP22.78■■□□□ 1.24
TPM4-201ENST00000300933 STAT4Q14765 748 aa22.78■■□□□ 1.24
TPM4-201ENST00000300933 STILQ15468 1287 aa22.78■■□□□ 1.24
TPM4-201ENST00000300933 PAN2Q504Q3 1202 aaKnown RBP22.78■■□□□ 1.24
TPM4-201ENST00000300933 FAM131BQ86XD5 332 aa22.78■■□□□ 1.24
TPM4-201ENST00000300933 FBXO36Q8NEA4 188 aa22.78■■□□□ 1.24
TPM4-201ENST00000300933 PAAF1Q9BRP4 392 aa22.78■■□□□ 1.24
TPM4-201ENST00000300933 ETNK1Q9HBU6 452 aa22.78■■□□□ 1.24
TPM4-201ENST00000300933 GABRQQ9UN88 632 aa22.78■■□□□ 1.24
TPM4-201ENST00000300933 SHOC2Q9UQ13 582 aa22.78■■□□□ 1.24
TPM4-201ENST00000300933 CHMP2BQ9UQN3 213 aa22.78■■□□□ 1.24
TPM4-201ENST00000300933 CALRP27797 417 aaKnown RBP22.77■■□□□ 1.24
TPM4-201ENST00000300933 RNASELQ05823 741 aaKnown RBP22.77■■□□□ 1.24
TPM4-201ENST00000300933 MGAT5Q09328 741 aa22.77■■□□□ 1.24
TPM4-201ENST00000300933 NOMO1Q15155 1222 aa22.77■■□□□ 1.24
TPM4-201ENST00000300933 GDF6Q6KF10 455 aaPredicted RBP22.77■■□□□ 1.24
TPM4-201ENST00000300933 C3orf62Q6ZUJ4 267 aa22.77■■□□□ 1.24
TPM4-201ENST00000300933 UNC93AQ86WB7 457 aa22.77■■□□□ 1.24
TPM4-201ENST00000300933 RELL1Q8IUW5 271 aa22.77■■□□□ 1.24
TPM4-201ENST00000300933 TGS1Q96RS0 853 aaKnown RBP22.77■■□□□ 1.24
TPM4-201ENST00000300933 RXFP1Q9HBX9 757 aa22.77■■□□□ 1.24
TPM4-201ENST00000300933 MIOSQ9NXC5 875 aa22.77■■□□□ 1.24
TPM4-201ENST00000300933 ST3GAL5Q9UNP4 418 aa22.77■■□□□ 1.24
TPM4-201ENST00000300933 A0A1W2PPM1 405 aa22.77■■□□□ 1.24
TPM4-201ENST00000300933 CYB561D2O14569 222 aa22.77■■□□□ 1.24
TPM4-201ENST00000300933 GBE1Q04446 702 aa22.77■■□□□ 1.24
TPM4-201ENST00000300933 ADIGQ0VDE8 80 aa22.77■■□□□ 1.24
TPM4-201ENST00000300933 KIAA0319Q5VV43 1072 aa22.77■■□□□ 1.24
TPM4-201ENST00000300933 PIGZQ86VD9 579 aa22.77■■□□□ 1.24
TPM4-201ENST00000300933 APBA2Q99767 749 aa22.77■■□□□ 1.24
TPM4-201ENST00000300933 NKX1-2Q9UD57 310 aaPredicted RBP22.77■■□□□ 1.24
TPM4-201ENST00000300933 MANSC4A6NHS7 340 aaPredicted RBP22.76■■□□□ 1.23
TPM4-201ENST00000300933 I3L4J1 428 aa22.76■■□□□ 1.23
TPM4-201ENST00000300933 KRT15P19012 456 aa22.76■■□□□ 1.23
TPM4-201ENST00000300933 ASRGL1Q7L266 308 aa22.76■■□□□ 1.23
TPM4-201ENST00000300933 MAML1Q92585 1016 aa22.76■■□□□ 1.23
TPM4-201ENST00000300933 TBCBQ99426 244 aa22.76■■□□□ 1.23
TPM4-201ENST00000300933 UBN1Q9NPG3 1134 aa22.76■■□□□ 1.23
TPM4-201ENST00000300933 RAB6BQ9NRW1 208 aa22.76■■□□□ 1.23
TPM4-201ENST00000300933 KIF3CO14782 793 aa22.76■■□□□ 1.23
TPM4-201ENST00000300933 AXLP30530 894 aa22.76■■□□□ 1.23
TPM4-201ENST00000300933 BCAT1P54687 386 aa22.76■■□□□ 1.23
TPM4-201ENST00000300933 BOLA3Q53S33 107 aa22.76■■□□□ 1.23
TPM4-201ENST00000300933 ARHGAP17Q68EM7 881 aa22.76■■□□□ 1.23
TPM4-201ENST00000300933 RGMBQ6NW40 437 aa22.76■■□□□ 1.23
TPM4-201ENST00000300933 CRYBG2Q8N1P7 616 aa22.76■■□□□ 1.23
TPM4-201ENST00000300933 B3GALNT2Q8NCR0 500 aa22.76■■□□□ 1.23
TPM4-201ENST00000300933 CCDC110Q8TBZ0 833 aa22.76■■□□□ 1.23
TPM4-201ENST00000300933 MYO18AQ92614 2054 aaKnown RBP22.76■■□□□ 1.23
TPM4-201ENST00000300933 KCNE1P15382 129 aa22.75■■□□□ 1.23
TPM4-201ENST00000300933 SLC10A2Q12908 348 aaPredicted RBP22.75■■□□□ 1.23
TPM4-201ENST00000300933 FAM47EQ6ZV65 393 aa22.75■■□□□ 1.23
TPM4-201ENST00000300933 MAP7D3Q8IWC1 876 aa22.75■■□□□ 1.23
TPM4-201ENST00000300933 SPDYE1Q8NFV5 336 aaPredicted RBP22.75■■□□□ 1.23
TPM4-201ENST00000300933 USP29Q9HBJ7 922 aa22.75■■□□□ 1.23
TPM4-201ENST00000300933 ETNK2Q9NVF9 386 aa22.75■■□□□ 1.23
TPM4-201ENST00000300933 EURLQ9NYK6 297 aa22.75■■□□□ 1.23
TPM4-201ENST00000300933 APOL1O14791 398 aa22.75■■□□□ 1.23
TPM4-201ENST00000300933 STX2P32856 288 aa22.75■■□□□ 1.23
TPM4-201ENST00000300933 BLMHQ13867 455 aa22.75■■□□□ 1.23
TPM4-201ENST00000300933 GSTCDQ8NEC7 633 aa22.75■■□□□ 1.23
TPM4-201ENST00000300933 ADAM32Q8TC27 787 aa22.75■■□□□ 1.23
TPM4-201ENST00000300933 ZNF560Q96MR9 790 aa22.75■■□□□ 1.23
TPM4-201ENST00000300933 KLF6Q99612 283 aaPredicted RBP22.75■■□□□ 1.23
TPM4-201ENST00000300933 OSBPL1AQ9BXW6 950 aa22.75■■□□□ 1.23
TPM4-201ENST00000300933 C12orf65Q9H3J6 166 aaKnown RBP22.75■■□□□ 1.23
TPM4-201ENST00000300933 ZMYND8Q9ULU4 1186 aaPredicted RBP22.75■■□□□ 1.23
TPM4-201ENST00000300933 CORO1CQ9ULV4 474 aaPredicted RBP22.75■■□□□ 1.23
TPM4-201ENST00000300933 CASTOR2A6NHX0 329 aa22.75■■□□□ 1.23
TPM4-201ENST00000300933 TCEA3O75764 348 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms