RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 LPCAT2Q7L5N7 544 aa11.36□□□□□ -0.59
SNX20-201ENST00000300590 USP37Q86T82 979 aa11.36□□□□□ -0.59
SNX20-201ENST00000300590 ZNF410Q86VK4 478 aa11.36□□□□□ -0.59
SNX20-201ENST00000300590 TTLL6Q8N841 843 aa11.36□□□□□ -0.59
SNX20-201ENST00000300590 ZSCAN18Q8TBC5 510 aaPredicted RBP11.36□□□□□ -0.59
SNX20-201ENST00000300590 MOCOSQ96EN8 888 aa11.36□□□□□ -0.59
SNX20-201ENST00000300590 APOBEC3GQ9HC16 384 aaKnown RBP11.36□□□□□ -0.59
SNX20-201ENST00000300590 THAP1Q9NVV9 213 aa11.36□□□□□ -0.59
SNX20-201ENST00000300590 RRN3Q9NYV6 651 aa11.36□□□□□ -0.59
SNX20-201ENST00000300590 SIRPGQ9P1W8 387 aa11.36□□□□□ -0.59
SNX20-201ENST00000300590 CNTNAP2Q9UHC6 1331 aa11.36□□□□□ -0.59
SNX20-201ENST00000300590 TRIM43BA6NCK2 446 aa11.36□□□□□ -0.59
SNX20-201ENST00000300590 KLF11O14901 512 aa11.36□□□□□ -0.59
SNX20-201ENST00000300590 MCF2LO15068 1137 aa11.36□□□□□ -0.59
SNX20-201ENST00000300590 IL1R1P14778 569 aa11.36□□□□□ -0.59
SNX20-201ENST00000300590 CDH2P19022 906 aaPredicted RBP11.36□□□□□ -0.59
SNX20-201ENST00000300590 RFC1P35251 1148 aaPredicted RBP11.36□□□□□ -0.59
SNX20-201ENST00000300590 QARSP47897 775 aaKnown RBP11.36□□□□□ -0.59
SNX20-201ENST00000300590 CDH15P55291 814 aa11.36□□□□□ -0.59
SNX20-201ENST00000300590 DMP1Q13316 513 aaPredicted RBP11.36□□□□□ -0.59
SNX20-201ENST00000300590 CPNE9Q8IYJ1 553 aa11.36□□□□□ -0.59
SNX20-201ENST00000300590 RNF169Q8NCN4 708 aa11.36□□□□□ -0.59
SNX20-201ENST00000300590 FAM156AQ8NDB6 213 aa11.36□□□□□ -0.59
SNX20-201ENST00000300590 PPP4R1Q8TF05 950 aa11.36□□□□□ -0.59
SNX20-201ENST00000300590 JADE3Q92613 823 aa11.36□□□□□ -0.59
SNX20-201ENST00000300590 BTBD9Q96Q07 612 aa11.36□□□□□ -0.59
SNX20-201ENST00000300590 CDRT15Q96T59 188 aa11.36□□□□□ -0.59
SNX20-201ENST00000300590 MRPS26Q9BYN8 205 aaKnown RBP11.36□□□□□ -0.59
SNX20-201ENST00000300590 RNPEPQ9H4A4 650 aa11.36□□□□□ -0.59
SNX20-201ENST00000300590 CLEC11AQ9Y240 323 aa11.36□□□□□ -0.59
SNX20-201ENST00000300590 HEY1Q9Y5J3 304 aa11.36□□□□□ -0.59
SNX20-201ENST00000300590 PHLPP1O60346 1717 aa11.36□□□□□ -0.59
SNX20-201ENST00000300590 ADCY6O43306 1168 aa11.35□□□□□ -0.59
SNX20-201ENST00000300590 CSPG5O95196 566 aa11.35□□□□□ -0.59
SNX20-201ENST00000300590 MLH1P40692 756 aa11.35□□□□□ -0.59
SNX20-201ENST00000300590 FLOT2Q14254 428 aa11.35□□□□□ -0.59
SNX20-201ENST00000300590 PSMD6Q15008 389 aa11.35□□□□□ -0.59
SNX20-201ENST00000300590 EML3Q32P44 896 aa11.35□□□□□ -0.59
SNX20-201ENST00000300590 TDRD10Q5VZ19 366 aaKnown RBP11.35□□□□□ -0.59
SNX20-201ENST00000300590 BSPRYQ5W0U4 402 aa11.35□□□□□ -0.59
SNX20-201ENST00000300590 CASC4Q6P4E1 433 aa11.35□□□□□ -0.59
SNX20-201ENST00000300590 SCARA5Q6ZMJ2 495 aa11.35□□□□□ -0.59
SNX20-201ENST00000300590 C12orf56Q8IXR9 622 aa11.35□□□□□ -0.59
SNX20-201ENST00000300590 GPD1LQ8N335 351 aa11.35□□□□□ -0.59
SNX20-201ENST00000300590 MARVELD2Q8N4S9 558 aa11.35□□□□□ -0.59
SNX20-201ENST00000300590 TMEM161BQ8NDZ6 487 aa11.35□□□□□ -0.59
SNX20-201ENST00000300590 BSNDQ8WZ55 320 aa11.35□□□□□ -0.59
SNX20-201ENST00000300590 ARHGEF1Q92888 912 aaKnown RBP11.35□□□□□ -0.59
SNX20-201ENST00000300590 RBM38Q9H0Z9 239 aaKnown RBP11.35□□□□□ -0.59
SNX20-201ENST00000300590 ARMC7Q9H6L4 198 aa11.35□□□□□ -0.59
SNX20-201ENST00000300590 TIMMDC1Q9NPL8 285 aa11.35□□□□□ -0.59
SNX20-201ENST00000300590 NYAP2Q9P242 653 aa11.35□□□□□ -0.59
SNX20-201ENST00000300590 FETUBQ9UGM5 382 aa11.35□□□□□ -0.59
SNX20-201ENST00000300590 SF3B1O75533 1304 aaKnown RBP eCLIP11.35□□□□□ -0.59
SNX20-201ENST00000300590 DOT1LQ8TEK3 1739 aa11.35□□□□□ -0.59
SNX20-201ENST00000300590 KRT38O76015 456 aa11.35□□□□□ -0.59
SNX20-201ENST00000300590 F7P08709 466 aaPredicted RBP11.35□□□□□ -0.59
SNX20-201ENST00000300590 ENO3P13929 434 aaPredicted RBP11.35□□□□□ -0.59
SNX20-201ENST00000300590 ALOX15P16050 662 aaPredicted RBP11.35□□□□□ -0.59
SNX20-201ENST00000300590 ATP2B4P23634 1241 aa11.35□□□□□ -0.59
SNX20-201ENST00000300590 WASHC5Q12768 1159 aa11.35□□□□□ -0.59
SNX20-201ENST00000300590 CUL2Q13617 745 aa11.35□□□□□ -0.59
SNX20-201ENST00000300590 TBCCQ15814 346 aa11.35□□□□□ -0.59
SNX20-201ENST00000300590 N4BP2L1Q5TBK1 243 aaPredicted RBP11.35□□□□□ -0.59
SNX20-201ENST00000300590 PGM2L1Q6PCE3 622 aa11.35□□□□□ -0.59
SNX20-201ENST00000300590 DPH6Q7L8W6 267 aa11.35□□□□□ -0.59
SNX20-201ENST00000300590 PATL1Q86TB9 770 aaKnown RBP11.35□□□□□ -0.59
SNX20-201ENST00000300590 KBTBD6Q86V97 674 aa11.35□□□□□ -0.59
SNX20-201ENST00000300590 IL31RAQ8NI17 732 aa11.35□□□□□ -0.59
SNX20-201ENST00000300590 FNDC8Q8TC99 324 aa11.35□□□□□ -0.59
SNX20-201ENST00000300590 ACTRT2Q8TDY3 377 aa11.35□□□□□ -0.59
SNX20-201ENST00000300590 CMTM5Q96DZ9 223 aa11.35□□□□□ -0.59
SNX20-201ENST00000300590 ZFRQ96KR1 1074 aaKnown RBP11.35□□□□□ -0.59
SNX20-201ENST00000300590 EPB41L1Q9H4G0 881 aa11.35□□□□□ -0.59
SNX20-201ENST00000300590 TBC1D22BQ9NU19 505 aa11.35□□□□□ -0.59
SNX20-201ENST00000300590 PSMD13Q9UNM6 376 aa11.35□□□□□ -0.59
SNX20-201ENST00000300590 TEX264Q9Y6I9 313 aa11.35□□□□□ -0.59
SNX20-201ENST00000300590 E7ESA3 106 aa11.35□□□□□ -0.59
SNX20-201ENST00000300590 STX16-NPEPL1H3BU86 382 aa11.35□□□□□ -0.59
SNX20-201ENST00000300590 MYCLP12524 364 aaPredicted RBP11.35□□□□□ -0.59
SNX20-201ENST00000300590 IDH3AP50213 366 aa11.35□□□□□ -0.59
SNX20-201ENST00000300590 PRAMEP78395 509 aa11.35□□□□□ -0.59
SNX20-201ENST00000300590 SPP2Q13103 211 aa11.35□□□□□ -0.59
SNX20-201ENST00000300590 FAM182BQ5T319 152 aa11.35□□□□□ -0.59
SNX20-201ENST00000300590 OGFRL1Q5TC84 451 aaPredicted RBP11.35□□□□□ -0.59
SNX20-201ENST00000300590 ENOSF1Q7L5Y1 443 aa11.35□□□□□ -0.59
SNX20-201ENST00000300590 NANOGNBQ7Z5D8 188 aa11.35□□□□□ -0.59
SNX20-201ENST00000300590 ZNF677Q86XU0 584 aa11.35□□□□□ -0.59
SNX20-201ENST00000300590 ADGRF2Q8IZF7 708 aa11.35□□□□□ -0.59
SNX20-201ENST00000300590 JOSD2Q8TAC2 188 aa11.35□□□□□ -0.59
SNX20-201ENST00000300590 DIS3LQ8TF46 1054 aaKnown RBP11.35□□□□□ -0.59
SNX20-201ENST00000300590 ATXN7L3BQ96GX2 97 aa11.35□□□□□ -0.59
SNX20-201ENST00000300590 ZBTB45Q96K62 511 aaPredicted RBP11.35□□□□□ -0.59
SNX20-201ENST00000300590 PAIP1Q9H074 479 aaKnown RBP11.35□□□□□ -0.59
SNX20-201ENST00000300590 FBXO28Q9NVF7 368 aa11.35□□□□□ -0.59
SNX20-201ENST00000300590 RSL24D1Q9UHA3 163 aaKnown RBP11.35□□□□□ -0.59
SNX20-201ENST00000300590 ARHGAP26Q9UNA1 814 aa11.35□□□□□ -0.59
SNX20-201ENST00000300590 NUB1Q9Y5A7 615 aa11.35□□□□□ -0.59
SNX20-201ENST00000300590 PTPRJQ12913 1337 aa11.35□□□□□ -0.59
SNX20-201ENST00000300590 E2F6O75461 281 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms