RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 ITGA11Q9UKX5 1188 aa13.48□□□□□ -0.25
TVP23A-201ENST00000299866 ZNF536O15090 1300 aa13.48□□□□□ -0.25
TVP23A-201ENST00000299866 E2F8A0AVK6 867 aa13.48□□□□□ -0.25
TVP23A-201ENST00000299866 H0YIN7 160 aa13.48□□□□□ -0.25
TVP23A-201ENST00000299866 BOLA2-SMG1P6H3BVE0 249 aa13.48□□□□□ -0.25
TVP23A-201ENST00000299866 CASQ2O14958 399 aaPredicted RBP13.48□□□□□ -0.25
TVP23A-201ENST00000299866 DENRO43583 198 aaKnown RBP13.48□□□□□ -0.25
TVP23A-201ENST00000299866 TNFAIP8O95379 198 aa13.48□□□□□ -0.25
TVP23A-201ENST00000299866 PTPN7P35236 360 aa13.48□□□□□ -0.25
TVP23A-201ENST00000299866 LIG4P49917 911 aa13.48□□□□□ -0.25
TVP23A-201ENST00000299866 YWHAZP63104 245 aaKnown RBP13.48□□□□□ -0.25
TVP23A-201ENST00000299866 TIMMDC1Q9NPL8 285 aa13.48□□□□□ -0.25
TVP23A-201ENST00000299866 SORCS3Q9UPU3 1222 aa13.48□□□□□ -0.25
TVP23A-201ENST00000299866 AIM2O14862 343 aa13.48□□□□□ -0.25
TVP23A-201ENST00000299866 PEX1O43933 1283 aa13.48□□□□□ -0.25
TVP23A-201ENST00000299866 NELFEP18615 380 aaKnown RBP13.48□□□□□ -0.25
TVP23A-201ENST00000299866 IDH3AP50213 366 aa13.48□□□□□ -0.25
TVP23A-201ENST00000299866 ROR1Q01973 937 aa13.48□□□□□ -0.25
TVP23A-201ENST00000299866 TEDDM1Q5T9Z0 273 aa13.48□□□□□ -0.25
TVP23A-201ENST00000299866 LDHDQ86WU2 507 aa13.48□□□□□ -0.25
TVP23A-201ENST00000299866 ADGRF2Q8IZF7 708 aa13.48□□□□□ -0.25
TVP23A-201ENST00000299866 ARFGAP1Q8N6T3 406 aa13.48□□□□□ -0.25
TVP23A-201ENST00000299866 RAB3IL1Q8TBN0 382 aa13.48□□□□□ -0.25
TVP23A-201ENST00000299866 CMTM5Q96DZ9 223 aa13.48□□□□□ -0.25
TVP23A-201ENST00000299866 SUDS3Q9H7L9 328 aaPredicted RBP13.48□□□□□ -0.25
TVP23A-201ENST00000299866 COL20A1Q9P218 1284 aa13.48□□□□□ -0.25
TVP23A-201ENST00000299866 GNEQ9Y223 722 aaKnown RBP13.48□□□□□ -0.25
TVP23A-201ENST00000299866 LRCH4O75427 683 aa13.47□□□□□ -0.25
TVP23A-201ENST00000299866 APRTP07741 180 aa13.47□□□□□ -0.25
TVP23A-201ENST00000299866 FUT4P22083 530 aa13.47□□□□□ -0.25
TVP23A-201ENST00000299866 PLOD1Q02809 727 aaPredicted RBP13.47□□□□□ -0.25
TVP23A-201ENST00000299866 TRAPPC3LQ5T215 181 aa13.47□□□□□ -0.25
TVP23A-201ENST00000299866 HHIPL2Q6UWX4 724 aa13.47□□□□□ -0.25
TVP23A-201ENST00000299866 MAVSQ7Z434 540 aa13.47□□□□□ -0.25
TVP23A-201ENST00000299866 RNF148Q8N7C7 305 aa13.47□□□□□ -0.25
TVP23A-201ENST00000299866 TMEM35BQ8NCS4 154 aa13.47□□□□□ -0.25
TVP23A-201ENST00000299866 CEP170P1Q96L14 293 aa13.47□□□□□ -0.25
TVP23A-201ENST00000299866 AGO4Q9HCK5 861 aaKnown RBP13.47□□□□□ -0.25
TVP23A-201ENST00000299866 PSMD13Q9UNM6 376 aa13.47□□□□□ -0.25
TVP23A-201ENST00000299866 ZNF232Q9UNY5 417 aa13.47□□□□□ -0.25
TVP23A-201ENST00000299866 SRCAPQ6ZRS2 3230 aa13.47□□□□□ -0.25
TVP23A-201ENST00000299866 ZNF541Q9H0D2 1346 aa13.47□□□□□ -0.25
TVP23A-201ENST00000299866 BTBD19C9JJ37 291 aa13.47□□□□□ -0.25
TVP23A-201ENST00000299866 SPAG6O75602 509 aa13.47□□□□□ -0.25
TVP23A-201ENST00000299866 BBOX1O75936 387 aa13.47□□□□□ -0.25
TVP23A-201ENST00000299866 FAM58BPP0C7Q3 252 aa13.47□□□□□ -0.25
TVP23A-201ENST00000299866 MYCLP12524 364 aaPredicted RBP13.47□□□□□ -0.25
TVP23A-201ENST00000299866 HADHQ16836 314 aaKnown RBP13.47□□□□□ -0.25
TVP23A-201ENST00000299866 TKFCQ3LXA3 575 aa13.47□□□□□ -0.25
TVP23A-201ENST00000299866 ZBTB41Q5SVQ8 909 aa13.47□□□□□ -0.25
TVP23A-201ENST00000299866 RARS2Q5T160 578 aaKnown RBP13.47□□□□□ -0.25
TVP23A-201ENST00000299866 KIAA0319LQ8IZA0 1049 aa13.47□□□□□ -0.25
TVP23A-201ENST00000299866 OR5B17Q8NGF7 314 aa13.47□□□□□ -0.25
TVP23A-201ENST00000299866 ZBTB45Q96K62 511 aaPredicted RBP13.47□□□□□ -0.25
TVP23A-201ENST00000299866 NRDE2Q9H7Z3 1164 aa13.47□□□□□ -0.25
TVP23A-201ENST00000299866 E9PBE3 544 aa13.46□□□□□ -0.25
TVP23A-201ENST00000299866 XPO1O14980 1071 aaKnown RBP13.46□□□□□ -0.25
TVP23A-201ENST00000299866 RGL2O15211 777 aa13.46□□□□□ -0.25
TVP23A-201ENST00000299866 CFLARO15519 480 aa13.46□□□□□ -0.25
TVP23A-201ENST00000299866 KLHL41O60662 606 aa13.46□□□□□ -0.25
TVP23A-201ENST00000299866 C1QAP02745 245 aa13.46□□□□□ -0.25
TVP23A-201ENST00000299866 CD1EP15812 388 aa13.46□□□□□ -0.25
TVP23A-201ENST00000299866 OSBPP22059 807 aa13.46□□□□□ -0.25
TVP23A-201ENST00000299866 SP4Q02446 784 aa13.46□□□□□ -0.25
TVP23A-201ENST00000299866 SULT2A1Q06520 285 aa13.46□□□□□ -0.25
TVP23A-201ENST00000299866 MTMR1Q13613 665 aa13.46□□□□□ -0.25
TVP23A-201ENST00000299866 LPIN1Q14693 890 aa13.46□□□□□ -0.25
TVP23A-201ENST00000299866 C1QTNF12Q5T7M4 302 aa13.46□□□□□ -0.25
TVP23A-201ENST00000299866 RC3H1Q5TC82 1133 aaKnown RBP13.46□□□□□ -0.25
TVP23A-201ENST00000299866 ZNF410Q86VK4 478 aa13.46□□□□□ -0.25
TVP23A-201ENST00000299866 RIN3Q8TB24 985 aa13.46□□□□□ -0.25
TVP23A-201ENST00000299866 AGR3Q8TD06 166 aa13.46□□□□□ -0.25
TVP23A-201ENST00000299866 PPP4R1Q8TF05 950 aa13.46□□□□□ -0.25
TVP23A-201ENST00000299866 DIS3LQ8TF46 1054 aaKnown RBP13.46□□□□□ -0.25
TVP23A-201ENST00000299866 SLC17A6Q9P2U8 582 aa13.46□□□□□ -0.25
TVP23A-201ENST00000299866 HERC5Q9UII4 1024 aaKnown RBP13.46□□□□□ -0.25
TVP23A-201ENST00000299866 TBC1D12O60347 775 aa13.46□□□□□ -0.25
TVP23A-201ENST00000299866 KRT7P08729 469 aa13.46□□□□□ -0.25
TVP23A-201ENST00000299866 KRT3P12035 628 aa13.46□□□□□ -0.25
TVP23A-201ENST00000299866 COX4I1P13073 169 aa13.46□□□□□ -0.25
TVP23A-201ENST00000299866 CDKL1Q00532 357 aa13.46□□□□□ -0.25
TVP23A-201ENST00000299866 SLC25A11Q02978 314 aaKnown RBP13.46□□□□□ -0.25
TVP23A-201ENST00000299866 KCNJ11Q14654 390 aa13.46□□□□□ -0.25
TVP23A-201ENST00000299866 SLC44A4Q53GD3 710 aa13.46□□□□□ -0.25
TVP23A-201ENST00000299866 N4BP2L1Q5TBK1 243 aaPredicted RBP13.46□□□□□ -0.25
TVP23A-201ENST00000299866 TRIML2Q8N7C3 387 aa13.46□□□□□ -0.25
TVP23A-201ENST00000299866 TMIGD2Q96BF3 282 aa13.46□□□□□ -0.25
TVP23A-201ENST00000299866 KCNK16Q96T55 309 aa13.46□□□□□ -0.25
TVP23A-201ENST00000299866 TBC1D22BQ9NU19 505 aa13.46□□□□□ -0.25
TVP23A-201ENST00000299866 ARHGAP26Q9UNA1 814 aa13.46□□□□□ -0.25
TVP23A-201ENST00000299866 HMX2A2RU54 273 aa13.46□□□□□ -0.26
TVP23A-201ENST00000299866 WDR64B1ANS9 1081 aa13.46□□□□□ -0.26
TVP23A-201ENST00000299866 KCNN4O15554 427 aa13.46□□□□□ -0.26
TVP23A-201ENST00000299866 EXTL3O43909 919 aa13.46□□□□□ -0.26
TVP23A-201ENST00000299866 ATP5BP06576 529 aaKnown RBP13.46□□□□□ -0.26
TVP23A-201ENST00000299866 EIF2AK2P19525 551 aaKnown RBP13.46□□□□□ -0.26
TVP23A-201ENST00000299866 CRHR1P34998 444 aa13.46□□□□□ -0.26
TVP23A-201ENST00000299866 GMPRP36959 345 aa13.46□□□□□ -0.26
TVP23A-201ENST00000299866 RPL26P61254 145 aaKnown RBP13.46□□□□□ -0.26
TVP23A-201ENST00000299866 FAM182BQ5T319 152 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms