RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 FBXO21O94952 628 aa9.52□□□□□ -0.89
PDPN-201ENST00000294489 FAM200BP0CF97 657 aa9.52□□□□□ -0.89
PDPN-201ENST00000294489 RBP3P10745 1247 aa9.52□□□□□ -0.89
PDPN-201ENST00000294489 ETS1P14921 441 aa9.52□□□□□ -0.89
PDPN-201ENST00000294489 ATP5DP30049 168 aa9.52□□□□□ -0.89
PDPN-201ENST00000294489 STIP1P31948 543 aaKnown RBP9.52□□□□□ -0.89
PDPN-201ENST00000294489 HNRNPH2P55795 449 aaKnown RBP9.52□□□□□ -0.89
PDPN-201ENST00000294489 HDAC4P56524 1084 aa9.52□□□□□ -0.89
PDPN-201ENST00000294489 MRPS5P82675 430 aaKnown RBP9.52□□□□□ -0.89
PDPN-201ENST00000294489 STRADAQ7RTN6 431 aa9.52□□□□□ -0.89
PDPN-201ENST00000294489 BCAS4Q8TDM0 211 aa9.52□□□□□ -0.89
PDPN-201ENST00000294489 RNF157Q96PX1 679 aa9.52□□□□□ -0.89
PDPN-201ENST00000294489 MED10Q9BTT4 135 aa9.52□□□□□ -0.89
PDPN-201ENST00000294489 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.52□□□□□ -0.89
PDPN-201ENST00000294489 LSP1P33241 339 aa9.52□□□□□ -0.89
PDPN-201ENST00000294489 MAGEA4P43358 317 aa9.52□□□□□ -0.89
PDPN-201ENST00000294489 SLCO1A2P46721 670 aa9.52□□□□□ -0.89
PDPN-201ENST00000294489 MMRN1Q13201 1228 aa9.52□□□□□ -0.89
PDPN-201ENST00000294489 MRPL58Q14197 206 aaKnown RBP9.52□□□□□ -0.89
PDPN-201ENST00000294489 RAB6CQ53S08 254 aa9.52□□□□□ -0.89
PDPN-201ENST00000294489 OTUD1Q5VV17 481 aaPredicted RBP9.52□□□□□ -0.89
PDPN-201ENST00000294489 MFSD5Q6N075 450 aa9.52□□□□□ -0.89
PDPN-201ENST00000294489 TAOK1Q7L7X3 1001 aa9.52□□□□□ -0.89
PDPN-201ENST00000294489 ANKLE1Q8NAG6 615 aa9.52□□□□□ -0.89
PDPN-201ENST00000294489 OR10T2Q8NGX3 314 aa9.52□□□□□ -0.89
PDPN-201ENST00000294489 EPS8L3Q8TE67 593 aaKnown RBP9.52□□□□□ -0.89
PDPN-201ENST00000294489 SMARCD1Q96GM5 515 aa9.52□□□□□ -0.89
PDPN-201ENST00000294489 TTC25Q96NG3 672 aa9.52□□□□□ -0.89
PDPN-201ENST00000294489 SERPINB12Q96P63 405 aa9.52□□□□□ -0.89
PDPN-201ENST00000294489 RAB6CQ9H0N0 254 aa9.52□□□□□ -0.89
PDPN-201ENST00000294489 LRRC4Q9HBW1 653 aa9.52□□□□□ -0.89
PDPN-201ENST00000294489 KRT82Q9NSB4 513 aa9.52□□□□□ -0.89
PDPN-201ENST00000294489 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.52□□□□□ -0.89
PDPN-201ENST00000294489 NINJ2Q9NZG7 142 aa9.52□□□□□ -0.89
PDPN-201ENST00000294489 TBX21Q9UL17 535 aa9.52□□□□□ -0.89
PDPN-201ENST00000294489 INPP5FQ9Y2H2 1132 aa9.52□□□□□ -0.89
PDPN-201ENST00000294489 TIMM13Q9Y5L4 95 aaPredicted RBP9.52□□□□□ -0.89
PDPN-201ENST00000294489 GREB1Q4ZG55 1949 aa9.52□□□□□ -0.89
PDPN-201ENST00000294489 DCDC2CA8MYV0 355 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 SMAPO00193 183 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 APOL1O14791 398 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 MATKP42679 507 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 CACNA2D1P54289 1103 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 ROR1Q01973 937 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 NOMO1Q15155 1222 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 MAPRE1Q15691 268 aaKnown RBP9.51□□□□□ -0.89
PDPN-201ENST00000294489 UBAP2Q5T6F2 1119 aaKnown RBP9.51□□□□□ -0.89
PDPN-201ENST00000294489 ERMARDQ5T6L9 678 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 RNASEH2BQ5TBB1 312 aaKnown RBP9.51□□□□□ -0.89
PDPN-201ENST00000294489 PM20D1Q6GTS8 502 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 DARS2Q6PI48 645 aaKnown RBP9.51□□□□□ -0.89
PDPN-201ENST00000294489 CENPUQ71F23 418 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 BEND5Q7L4P6 421 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 IRGQQ8WZA9 623 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 FAM149B1Q96BN6 582 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 PWWP2AQ96N64 755 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 ZNF670Q9BS34 389 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 SNRNP25Q9BV90 132 aaKnown RBP9.51□□□□□ -0.89
PDPN-201ENST00000294489 ZCWPW1Q9H0M4 648 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 LRRC4CQ9HCJ2 640 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 SAYSD1Q9NPB0 183 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 CNGB3Q9NQW8 809 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 SLC12A6Q9UHW9 1150 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 MYO16Q9Y6X6 1858 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 F8W810 466 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 SYN3O14994 580 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 PECAM1P16284 738 aaPredicted RBP9.51□□□□□ -0.89
PDPN-201ENST00000294489 TGM2P21980 687 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 IL4RP24394 825 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 CTCFP49711 727 aaPredicted RBP9.51□□□□□ -0.89
PDPN-201ENST00000294489 ADIGQ0VDE8 80 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 SLC25A52Q3SY17 297 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 ZC3H12AQ5D1E8 599 aaKnown RBP9.51□□□□□ -0.89
PDPN-201ENST00000294489 OVOS1Q6IE37 1185 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 LRRTM3Q86VH5 581 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 PSTKQ8IV42 348 aaKnown RBP9.51□□□□□ -0.89
PDPN-201ENST00000294489 PPIL6Q8IXY8 311 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 SIX6OS1Q8N1H7 587 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 MYLPFQ96A32 169 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 NPY6RQ99463 290 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 TMEM175Q9BSA9 504 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 PCDH18Q9HCL0 1135 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 TMLHEQ9NVH6 421 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 PCDHB7Q9Y5E2 793 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 USP3Q9Y6I4 520 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 PTPRSQ13332 1948 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 SRRM3A6NNA2 597 aaPredicted RBP9.51□□□□□ -0.89
PDPN-201ENST00000294489 I3L4J1 428 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 HOXA2O43364 376 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 AP1G2O75843 785 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 FYNP06241 537 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 GDF10P55107 478 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 BCAR1P56945 870 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 DAOAP59103 153 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 AUHQ13825 339 aaKnown RBP9.51□□□□□ -0.89
PDPN-201ENST00000294489 STAT4Q14765 748 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 LONRF1Q17RB8 773 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 ANKRD20A8PQ5CZ79 823 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 PPP6R3Q5H9R7 873 aaPredicted RBP9.51□□□□□ -0.89
PDPN-201ENST00000294489 ZC3H18Q86VM9 953 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms