RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 CLEC1BQ9P126 229 aa18.59■□□□□ 0.57
CCDC78-201ENST00000293889 IP6K2Q9UHH9 426 aa18.59■□□□□ 0.57
CCDC78-201ENST00000293889 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.58■□□□□ 0.56
CCDC78-201ENST00000293889 ZDHHC11BP0C7U3 371 aa18.58■□□□□ 0.56
CCDC78-201ENST00000293889 NCAM1P13591 858 aa18.58■□□□□ 0.56
CCDC78-201ENST00000293889 PSMA2P25787 234 aa18.58■□□□□ 0.56
CCDC78-201ENST00000293889 ZNF143P52747 638 aaPredicted RBP18.58■□□□□ 0.56
CCDC78-201ENST00000293889 CCDC14Q49A88 953 aa18.58■□□□□ 0.56
CCDC78-201ENST00000293889 DCAF6Q58WW2 860 aa18.58■□□□□ 0.56
CCDC78-201ENST00000293889 ZNF569Q5MCW4 686 aa18.58■□□□□ 0.56
CCDC78-201ENST00000293889 BTBD8Q5XKL5 378 aa18.58■□□□□ 0.56
CCDC78-201ENST00000293889 EP400NLQ6ZTU2 488 aa18.58■□□□□ 0.56
CCDC78-201ENST00000293889 BEND5Q7L4P6 421 aa18.58■□□□□ 0.56
CCDC78-201ENST00000293889 DAAM2Q86T65 1068 aa18.58■□□□□ 0.56
CCDC78-201ENST00000293889 CPNE8Q86YQ8 564 aa18.58■□□□□ 0.56
CCDC78-201ENST00000293889 HS6ST3Q8IZP7 471 aa18.58■□□□□ 0.56
CCDC78-201ENST00000293889 OVCA2Q8WZ82 227 aa18.58■□□□□ 0.56
CCDC78-201ENST00000293889 CFAP57Q96MR6 1250 aa18.58■□□□□ 0.56
CCDC78-201ENST00000293889 LRRC3Q9BY71 257 aa18.58■□□□□ 0.56
CCDC78-201ENST00000293889 TLR8Q9NR97 1041 aaKnown RBP18.58■□□□□ 0.56
CCDC78-201ENST00000293889 ABCC13Q9NSE7 274 aa18.58■□□□□ 0.56
CCDC78-201ENST00000293889 CCDC195A0A1B0GUA6 201 aa18.57■□□□□ 0.56
CCDC78-201ENST00000293889 DPYSL4O14531 572 aa18.57■□□□□ 0.56
CCDC78-201ENST00000293889 CAPN9O14815 690 aa18.57■□□□□ 0.56
CCDC78-201ENST00000293889 NCK2O43639 380 aa18.57■□□□□ 0.56
CCDC78-201ENST00000293889 PROSCO94903 275 aa18.57■□□□□ 0.56
CCDC78-201ENST00000293889 NOS2P35228 1153 aa18.57■□□□□ 0.56
CCDC78-201ENST00000293889 C11orf63Q6NUN7 778 aa18.57■□□□□ 0.56
CCDC78-201ENST00000293889 SLFN11Q7Z7L1 901 aa18.57■□□□□ 0.56
CCDC78-201ENST00000293889 TMC8Q8IU68 726 aa18.57■□□□□ 0.56
CCDC78-201ENST00000293889 C12orf76Q8N812 135 aaPredicted RBP18.57■□□□□ 0.56
CCDC78-201ENST00000293889 PDZD8Q8NEN9 1154 aa18.57■□□□□ 0.56
CCDC78-201ENST00000293889 TRIM58Q8NG06 486 aa18.57■□□□□ 0.56
CCDC78-201ENST00000293889 CASP10Q92851 521 aa18.57■□□□□ 0.56
CCDC78-201ENST00000293889 ZNF707Q96C28 371 aaPredicted RBP18.57■□□□□ 0.56
CCDC78-201ENST00000293889 CORO1BQ9BR76 489 aa18.57■□□□□ 0.56
CCDC78-201ENST00000293889 CNPY3Q9BT09 278 aa18.57■□□□□ 0.56
CCDC78-201ENST00000293889 TRIM62Q9BVG3 475 aa18.57■□□□□ 0.56
CCDC78-201ENST00000293889 PRKD2Q9BZL6 878 aa18.57■□□□□ 0.56
CCDC78-201ENST00000293889 UBE2ZQ9H832 354 aaPredicted RBP18.57■□□□□ 0.56
CCDC78-201ENST00000293889 IL21Q9HBE4 155 aa18.57■□□□□ 0.56
CCDC78-201ENST00000293889 HCFC1R1Q9NWW0 138 aa18.57■□□□□ 0.56
CCDC78-201ENST00000293889 UXTQ9UBK9 157 aaPredicted RBP18.57■□□□□ 0.56
CCDC78-201ENST00000293889 C2orf16Q68DN1 1984 aa18.57■□□□□ 0.56
CCDC78-201ENST00000293889 ZNF840PA6NDX5 716 aa18.56■□□□□ 0.56
CCDC78-201ENST00000293889 F11P03951 625 aa18.56■□□□□ 0.56
CCDC78-201ENST00000293889 TFE3P19532 575 aaPredicted RBP18.56■□□□□ 0.56
CCDC78-201ENST00000293889 SDC4P31431 198 aa18.56■□□□□ 0.56
CCDC78-201ENST00000293889 PSEN1P49768 467 aa18.56■□□□□ 0.56
CCDC78-201ENST00000293889 PIGHQ14442 188 aaPredicted RBP18.56■□□□□ 0.56
CCDC78-201ENST00000293889 C15orf59Q2T9L4 293 aaPredicted RBP18.56■□□□□ 0.56
CCDC78-201ENST00000293889 SH3PXD2AQ5TCZ1 1133 aa18.56■□□□□ 0.56
CCDC78-201ENST00000293889 TMCO3Q6UWJ1 677 aa18.56■□□□□ 0.56
CCDC78-201ENST00000293889 TMEM150AQ86TG1 271 aa18.56■□□□□ 0.56
CCDC78-201ENST00000293889 NIPA2Q8N8Q9 360 aa18.56■□□□□ 0.56
CCDC78-201ENST00000293889 ALS2CR12Q96Q35 445 aa18.56■□□□□ 0.56
CCDC78-201ENST00000293889 ADAM33Q9BZ11 813 aa18.56■□□□□ 0.56
CCDC78-201ENST00000293889 CLIC5Q9NZA1 410 aa18.56■□□□□ 0.56
CCDC78-201ENST00000293889 TRPM5Q9NZQ8 1165 aa18.56■□□□□ 0.56
CCDC78-201ENST00000293889 LCMT1Q9UIC8 334 aa18.56■□□□□ 0.56
CCDC78-201ENST00000293889 HYOU1Q9Y4L1 999 aa18.56■□□□□ 0.56
CCDC78-201ENST00000293889 ALG6Q9Y672 507 aa18.56■□□□□ 0.56
CCDC78-201ENST00000293889 XYLBO75191 536 aa18.56■□□□□ 0.56
CCDC78-201ENST00000293889 POU2F2P09086 479 aa18.56■□□□□ 0.56
CCDC78-201ENST00000293889 RARGP13631 454 aa18.56■□□□□ 0.56
CCDC78-201ENST00000293889 PTPN9P43378 593 aa18.56■□□□□ 0.56
CCDC78-201ENST00000293889 PITX1P78337 314 aaPredicted RBP18.56■□□□□ 0.56
CCDC78-201ENST00000293889 ATP11AP98196 1134 aa18.56■□□□□ 0.56
CCDC78-201ENST00000293889 SLC25A52Q3SY17 297 aa18.56■□□□□ 0.56
CCDC78-201ENST00000293889 SNX30Q5VWJ9 437 aa18.56■□□□□ 0.56
CCDC78-201ENST00000293889 DAB2IPQ5VWQ8 1189 aa18.56■□□□□ 0.56
CCDC78-201ENST00000293889 SLC35F6Q8N357 371 aa18.56■□□□□ 0.56
CCDC78-201ENST00000293889 ARFGAP1Q8N6T3 406 aa18.56■□□□□ 0.56
CCDC78-201ENST00000293889 HLA-CQ95604 372 aa18.56■□□□□ 0.56
CCDC78-201ENST00000293889 NT5C3BQ969T7 300 aa18.56■□□□□ 0.56
CCDC78-201ENST00000293889 NPY6RQ99463 290 aa18.56■□□□□ 0.56
CCDC78-201ENST00000293889 DZANK1Q9NVP4 752 aa18.56■□□□□ 0.56
CCDC78-201ENST00000293889 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.56■□□□□ 0.56
CCDC78-201ENST00000293889 DNMT3BQ9UBC3 853 aaKnown RBP18.56■□□□□ 0.56
CCDC78-201ENST00000293889 CDC23Q9UJX2 597 aa18.56■□□□□ 0.56
CCDC78-201ENST00000293889 NUDT5Q9UKK9 219 aa18.56■□□□□ 0.56
CCDC78-201ENST00000293889 USTQ9Y2C2 406 aa18.56■□□□□ 0.56
CCDC78-201ENST00000293889 C5orf42Q9H799 3197 aa18.55■□□□□ 0.56
CCDC78-201ENST00000293889 H3BQ06 376 aaPredicted RBP18.55■□□□□ 0.56
CCDC78-201ENST00000293889 PAPLNO95428 1278 aa18.55■□□□□ 0.56
CCDC78-201ENST00000293889 FTCDO95954 541 aa18.55■□□□□ 0.56
CCDC78-201ENST00000293889 PTPN2P17706 415 aa18.55■□□□□ 0.56
CCDC78-201ENST00000293889 COMTP21964 271 aa18.55■□□□□ 0.56
CCDC78-201ENST00000293889 KCNA5P22460 613 aa18.55■□□□□ 0.56
CCDC78-201ENST00000293889 MAN1A1P33908 653 aa18.55■□□□□ 0.56
CCDC78-201ENST00000293889 PPP3CCP48454 512 aa18.55■□□□□ 0.56
CCDC78-201ENST00000293889 SULT1E1P49888 294 aa18.55■□□□□ 0.56
CCDC78-201ENST00000293889 TERF2Q15554 542 aa18.55■□□□□ 0.56
CCDC78-201ENST00000293889 CDO1Q16878 200 aa18.55■□□□□ 0.56
CCDC78-201ENST00000293889 RAB6CQ53S08 254 aa18.55■□□□□ 0.56
CCDC78-201ENST00000293889 OTUD1Q5VV17 481 aaPredicted RBP18.55■□□□□ 0.56
CCDC78-201ENST00000293889 ANKRD54Q6NXT1 300 aa18.55■□□□□ 0.56
CCDC78-201ENST00000293889 GAREM2Q75VX8 874 aa18.55■□□□□ 0.56
CCDC78-201ENST00000293889 SYCE1Q8N0S2 351 aa18.55■□□□□ 0.56
CCDC78-201ENST00000293889 CEP112Q8N8E3 955 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms