RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 SLC44A1Q8WWI5 657 aa19.05■□□□□ 0.64
SHKBP1-201ENST00000291842 ZNF670Q9BS34 389 aa19.05■□□□□ 0.64
SHKBP1-201ENST00000291842 ZC3H7BQ9UGR2 993 aaKnown RBP19.05■□□□□ 0.64
SHKBP1-201ENST00000291842 UBQLN1Q9UMX0 589 aaKnown RBP19.05■□□□□ 0.64
SHKBP1-201ENST00000291842 SYNJ2BP-COX16A0A087WUM0 186 aa19.05■□□□□ 0.64
SHKBP1-201ENST00000291842 BCLAF3A2AJT9 711 aaKnown RBP19.05■□□□□ 0.64
SHKBP1-201ENST00000291842 TREHO43280 583 aa19.05■□□□□ 0.64
SHKBP1-201ENST00000291842 LPXNO60711 386 aa19.05■□□□□ 0.64
SHKBP1-201ENST00000291842 DESP17661 470 aa19.05■□□□□ 0.64
SHKBP1-201ENST00000291842 ARHGAP17Q68EM7 881 aa19.05■□□□□ 0.64
SHKBP1-201ENST00000291842 FAM131BQ86XD5 332 aa19.05■□□□□ 0.64
SHKBP1-201ENST00000291842 ZNF276Q8N554 614 aa19.05■□□□□ 0.64
SHKBP1-201ENST00000291842 PTPRN2Q92932 1015 aa19.05■□□□□ 0.64
SHKBP1-201ENST00000291842 KCTD15Q96SI1 283 aaPredicted RBP19.05■□□□□ 0.64
SHKBP1-201ENST00000291842 KLC2Q9H0B6 622 aa19.05■□□□□ 0.64
SHKBP1-201ENST00000291842 SNX25Q9H3E2 840 aa19.05■□□□□ 0.64
SHKBP1-201ENST00000291842 NOD2Q9HC29 1040 aa19.05■□□□□ 0.64
SHKBP1-201ENST00000291842 SSU72Q9NP77 194 aaKnown RBP19.05■□□□□ 0.64
SHKBP1-201ENST00000291842 TMPRSS4Q9NRS4 437 aa19.05■□□□□ 0.64
SHKBP1-201ENST00000291842 MTMR10Q9NXD2 777 aa19.05■□□□□ 0.64
SHKBP1-201ENST00000291842 COX16Q9P0S2 106 aa19.05■□□□□ 0.64
SHKBP1-201ENST00000291842 NRCAMQ92823 1304 aa19.05■□□□□ 0.64
SHKBP1-201ENST00000291842 IQANK1A0A1B0GTG1 560 aa19.04■□□□□ 0.64
SHKBP1-201ENST00000291842 GLTPD2A6NH11 291 aa19.04■□□□□ 0.64
SHKBP1-201ENST00000291842 PIRO00625 290 aa19.04■□□□□ 0.64
SHKBP1-201ENST00000291842 IGFBP6P24592 240 aaPredicted RBP19.04■□□□□ 0.64
SHKBP1-201ENST00000291842 TKTP29401 623 aaKnown RBP19.04■□□□□ 0.64
SHKBP1-201ENST00000291842 BCAT1P54687 386 aa19.04■□□□□ 0.64
SHKBP1-201ENST00000291842 ANKRD23Q86SG2 305 aa19.04■□□□□ 0.64
SHKBP1-201ENST00000291842 RTP4Q96DX8 246 aa19.04■□□□□ 0.64
SHKBP1-201ENST00000291842 PLAC1Q9HBJ0 212 aa19.04■□□□□ 0.64
SHKBP1-201ENST00000291842 CACNG4Q9UBN1 327 aa19.04■□□□□ 0.64
SHKBP1-201ENST00000291842 DCTN4Q9UJW0 460 aa19.04■□□□□ 0.64
SHKBP1-201ENST00000291842 TTLL3Q9Y4R7 772 aa19.04■□□□□ 0.64
SHKBP1-201ENST00000291842 USH1CQ9Y6N9 552 aa19.04■□□□□ 0.64
SHKBP1-201ENST00000291842 UGT1A9O60656 530 aa19.04■□□□□ 0.64
SHKBP1-201ENST00000291842 F2P00734 622 aa19.04■□□□□ 0.64
SHKBP1-201ENST00000291842 AMPD1P23109 780 aa19.04■□□□□ 0.64
SHKBP1-201ENST00000291842 GRIA1P42261 906 aa19.04■□□□□ 0.64
SHKBP1-201ENST00000291842 SNX17Q15036 470 aa19.04■□□□□ 0.64
SHKBP1-201ENST00000291842 KCNT2Q6UVM3 1135 aa19.04■□□□□ 0.64
SHKBP1-201ENST00000291842 VSIG1Q86XK7 387 aa19.04■□□□□ 0.64
SHKBP1-201ENST00000291842 STK32AQ8WU08 396 aa19.04■□□□□ 0.64
SHKBP1-201ENST00000291842 FAM149B1Q96BN6 582 aa19.04■□□□□ 0.64
SHKBP1-201ENST00000291842 FAM111AQ96PZ2 611 aa19.04■□□□□ 0.64
SHKBP1-201ENST00000291842 LRRC37BQ96QE4 947 aa19.04■□□□□ 0.64
SHKBP1-201ENST00000291842 C11orf84Q9BUA3 381 aaPredicted RBP19.04■□□□□ 0.64
SHKBP1-201ENST00000291842 UGT1A7Q9HAW7 530 aa19.04■□□□□ 0.64
SHKBP1-201ENST00000291842 UGT1A10Q9HAW8 530 aa19.04■□□□□ 0.64
SHKBP1-201ENST00000291842 UGT1A8Q9HAW9 530 aa19.04■□□□□ 0.64
SHKBP1-201ENST00000291842 POPDC2Q9HBU9 364 aa19.04■□□□□ 0.64
SHKBP1-201ENST00000291842 CPA4Q9UI42 421 aa19.04■□□□□ 0.64
SHKBP1-201ENST00000291842 SLC45A1Q9Y2W3 748 aa19.04■□□□□ 0.64
SHKBP1-201ENST00000291842 TRIP12Q14669 1992 aaPredicted RBP19.03■□□□□ 0.64
SHKBP1-201ENST00000291842 CEP350Q5VT06 3117 aa19.03■□□□□ 0.64
SHKBP1-201ENST00000291842 CLDN5O00501 218 aa19.03■□□□□ 0.64
SHKBP1-201ENST00000291842 GOT1P17174 413 aa19.03■□□□□ 0.64
SHKBP1-201ENST00000291842 ACAT1P24752 427 aaKnown RBP19.03■□□□□ 0.64
SHKBP1-201ENST00000291842 TARSP26639 723 aaKnown RBP19.03■□□□□ 0.64
SHKBP1-201ENST00000291842 SNX16P57768 344 aa19.03■□□□□ 0.64
SHKBP1-201ENST00000291842 PITX1P78337 314 aaPredicted RBP19.03■□□□□ 0.64
SHKBP1-201ENST00000291842 BEX3Q00994 111 aa19.03■□□□□ 0.64
SHKBP1-201ENST00000291842 MFSD10Q14728 455 aa19.03■□□□□ 0.64
SHKBP1-201ENST00000291842 SETDB1Q15047 1291 aa19.03■□□□□ 0.64
SHKBP1-201ENST00000291842 DPYSL2Q16555 572 aa19.03■□□□□ 0.64
SHKBP1-201ENST00000291842 OLFML2BQ68BL8 750 aa19.03■□□□□ 0.64
SHKBP1-201ENST00000291842 SLC26A9Q7LBE3 791 aa19.03■□□□□ 0.64
SHKBP1-201ENST00000291842 ZDHHC17Q8IUH5 632 aa19.03■□□□□ 0.64
SHKBP1-201ENST00000291842 MPP5Q8N3R9 675 aa19.03■□□□□ 0.64
SHKBP1-201ENST00000291842 ARRDC4Q8NCT1 418 aa19.03■□□□□ 0.64
SHKBP1-201ENST00000291842 APPL2Q8NEU8 664 aa19.03■□□□□ 0.64
SHKBP1-201ENST00000291842 C10orf82Q8WW14 230 aa19.03■□□□□ 0.64
SHKBP1-201ENST00000291842 USP6NLQ92738 828 aa19.03■□□□□ 0.64
SHKBP1-201ENST00000291842 CSPG4P5Q96PW8 444 aa19.03■□□□□ 0.64
SHKBP1-201ENST00000291842 TMEM237Q96Q45 408 aa19.03■□□□□ 0.64
SHKBP1-201ENST00000291842 FLRT1Q9NZU1 646 aa19.03■□□□□ 0.64
SHKBP1-201ENST00000291842 MAD1L1Q9Y6D9 718 aa19.03■□□□□ 0.64
SHKBP1-201ENST00000291842 DOCK3Q8IZD9 2030 aa19.03■□□□□ 0.64
SHKBP1-201ENST00000291842 SMIM35A0A1B0GVV1 85 aa19.03■□□□□ 0.64
SHKBP1-201ENST00000291842 CFAP69A5D8W1 941 aa19.03■□□□□ 0.64
SHKBP1-201ENST00000291842 TSHRP16473 764 aa19.03■□□□□ 0.64
SHKBP1-201ENST00000291842 PTPN9P43378 593 aa19.03■□□□□ 0.64
SHKBP1-201ENST00000291842 RABGGTBP53611 331 aa19.03■□□□□ 0.64
SHKBP1-201ENST00000291842 PLEKHG4Q58EX7 1191 aa19.03■□□□□ 0.64
SHKBP1-201ENST00000291842 ASRGL1Q7L266 308 aa19.03■□□□□ 0.64
SHKBP1-201ENST00000291842 TLK2Q86UE8 772 aa19.03■□□□□ 0.64
SHKBP1-201ENST00000291842 LRRC6Q86X45 466 aa19.03■□□□□ 0.64
SHKBP1-201ENST00000291842 CRYBG2Q8N1P7 616 aa19.03■□□□□ 0.64
SHKBP1-201ENST00000291842 FBXO41Q8TF61 875 aa19.03■□□□□ 0.64
SHKBP1-201ENST00000291842 UPF1Q92900 1129 aaKnown RBP eCLIP19.03■□□□□ 0.64
SHKBP1-201ENST00000291842 TTC17Q96AE7 1141 aa19.03■□□□□ 0.64
SHKBP1-201ENST00000291842 ARHGEF3Q9NR81 526 aa19.03■□□□□ 0.64
SHKBP1-201ENST00000291842 SMYD2Q9NRG4 433 aa19.03■□□□□ 0.64
SHKBP1-201ENST00000291842 TM9SF1O15321 606 aa19.02■□□□□ 0.64
SHKBP1-201ENST00000291842 UNC5CO95185 931 aa19.02■□□□□ 0.64
SHKBP1-201ENST00000291842 C1QAP02745 245 aa19.02■□□□□ 0.64
SHKBP1-201ENST00000291842 CENPIQ92674 756 aaPredicted RBP19.02■□□□□ 0.64
SHKBP1-201ENST00000291842 MANSC1Q9H8J5 431 aa19.02■□□□□ 0.64
SHKBP1-201ENST00000291842 PIH1D1Q9NWS0 290 aaKnown RBP19.02■□□□□ 0.64
SHKBP1-201ENST00000291842 HAO1Q9UJM8 370 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms