RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 LRMPQ12912 555 aa10.03□□□□□ -0.8
HMHB1-201ENST00000289448 CUL2Q13617 745 aa10.03□□□□□ -0.8
HMHB1-201ENST00000289448 NFKBIBQ15653 356 aa10.03□□□□□ -0.8
HMHB1-201ENST00000289448 GOLGA7BQ2TAP0 167 aa10.03□□□□□ -0.8
HMHB1-201ENST00000289448 BTBD8Q5XKL5 378 aa10.03□□□□□ -0.8
HMHB1-201ENST00000289448 TCEAL6Q6IPX3 200 aa10.03□□□□□ -0.8
HMHB1-201ENST00000289448 TTI2Q6NXR4 508 aa10.03□□□□□ -0.8
HMHB1-201ENST00000289448 TPGS1Q6ZTW0 290 aa10.03□□□□□ -0.8
HMHB1-201ENST00000289448 TOGARAM2Q6ZUX3 1019 aa10.03□□□□□ -0.8
HMHB1-201ENST00000289448 PIGZQ86VD9 579 aa10.03□□□□□ -0.8
HMHB1-201ENST00000289448 ELOA2Q8IYF1 753 aaPredicted RBP10.03□□□□□ -0.8
HMHB1-201ENST00000289448 FRMD1Q8N878 549 aa10.03□□□□□ -0.8
HMHB1-201ENST00000289448 TERB1Q8NA31 727 aa10.03□□□□□ -0.8
HMHB1-201ENST00000289448 ANKRD52Q8NB46 1076 aa10.03□□□□□ -0.8
HMHB1-201ENST00000289448 OLIG1Q8TAK6 271 aa10.03□□□□□ -0.8
HMHB1-201ENST00000289448 NETO1Q8TDF5 533 aa10.03□□□□□ -0.8
HMHB1-201ENST00000289448 RLN3Q8WXF3 142 aa10.03□□□□□ -0.8
HMHB1-201ENST00000289448 TCEAL3Q969E4 200 aa10.03□□□□□ -0.8
HMHB1-201ENST00000289448 UBXN6Q9BZV1 441 aa10.03□□□□□ -0.8
HMHB1-201ENST00000289448 DEC1Q9P2X7 70 aa10.03□□□□□ -0.8
HMHB1-201ENST00000289448 ARMCX3Q9UH62 379 aaPredicted RBP10.03□□□□□ -0.8
HMHB1-201ENST00000289448 FRYQ5TBA9 3013 aa10.03□□□□□ -0.8
HMHB1-201ENST00000289448 PRRT4C9JH25 899 aa10.02□□□□□ -0.81
HMHB1-201ENST00000289448 PSMA7O14818 248 aa10.02□□□□□ -0.81
HMHB1-201ENST00000289448 CACNG3O60359 315 aa10.02□□□□□ -0.81
HMHB1-201ENST00000289448 GABBR2O75899 941 aa10.02□□□□□ -0.81
HMHB1-201ENST00000289448 CALCAP01258 141 aa10.02□□□□□ -0.81
HMHB1-201ENST00000289448 HMBSP08397 361 aa10.02□□□□□ -0.81
HMHB1-201ENST00000289448 CISD3P0C7P0 127 aa10.02□□□□□ -0.81
HMHB1-201ENST00000289448 TYRP14679 529 aa10.02□□□□□ -0.81
HMHB1-201ENST00000289448 MPLP40238 635 aa10.02□□□□□ -0.81
HMHB1-201ENST00000289448 WASP42768 502 aa10.02□□□□□ -0.81
HMHB1-201ENST00000289448 PLA2G4AP47712 749 aa10.02□□□□□ -0.81
HMHB1-201ENST00000289448 FMO5P49326 533 aa10.02□□□□□ -0.81
HMHB1-201ENST00000289448 PDE4CQ08493 712 aa10.02□□□□□ -0.81
HMHB1-201ENST00000289448 MORC3Q14149 939 aa10.02□□□□□ -0.81
HMHB1-201ENST00000289448 USP39Q53GS9 565 aaKnown RBP10.02□□□□□ -0.81
HMHB1-201ENST00000289448 C10orf76Q5T2E6 689 aa10.02□□□□□ -0.81
HMHB1-201ENST00000289448 EGFLAMQ63HQ2 1017 aa10.02□□□□□ -0.81
HMHB1-201ENST00000289448 PM20D1Q6GTS8 502 aa10.02□□□□□ -0.81
HMHB1-201ENST00000289448 KLHL10Q6JEL2 608 aa10.02□□□□□ -0.81
HMHB1-201ENST00000289448 ZNF276Q8N554 614 aa10.02□□□□□ -0.81
HMHB1-201ENST00000289448 TTC39CQ8N584 583 aa10.02□□□□□ -0.81
HMHB1-201ENST00000289448 LMO3Q8TAP4 145 aa10.02□□□□□ -0.81
HMHB1-201ENST00000289448 UBA3Q8TBC4 463 aa10.02□□□□□ -0.81
HMHB1-201ENST00000289448 TFAP2BQ92481 460 aa10.02□□□□□ -0.81
HMHB1-201ENST00000289448 KAT5Q92993 513 aa10.02□□□□□ -0.81
HMHB1-201ENST00000289448 BHMTQ93088 406 aa10.02□□□□□ -0.81
HMHB1-201ENST00000289448 DHTKD1Q96HY7 919 aaPredicted RBP10.02□□□□□ -0.81
HMHB1-201ENST00000289448 CEP63Q96MT8 703 aa10.02□□□□□ -0.81
HMHB1-201ENST00000289448 ACOX2Q99424 681 aa10.02□□□□□ -0.81
HMHB1-201ENST00000289448 ZSWIM1Q9BR11 485 aa10.02□□□□□ -0.81
HMHB1-201ENST00000289448 BBS2Q9BXC9 721 aa10.02□□□□□ -0.81
HMHB1-201ENST00000289448 FAM124BQ9H5Z6 455 aaPredicted RBP10.02□□□□□ -0.81
HMHB1-201ENST00000289448 DNAJC17Q9NVM6 304 aaKnown RBP10.02□□□□□ -0.81
HMHB1-201ENST00000289448 PLK2Q9NYY3 685 aa10.02□□□□□ -0.81
HMHB1-201ENST00000289448 CLIC5Q9NZA1 410 aa10.02□□□□□ -0.81
HMHB1-201ENST00000289448 MARK1Q9P0L2 795 aa10.02□□□□□ -0.81
HMHB1-201ENST00000289448 TSPAN16Q9UKR8 245 aa10.02□□□□□ -0.81
HMHB1-201ENST00000289448 PCDHGA5Q9Y5G8 931 aa10.02□□□□□ -0.81
HMHB1-201ENST00000289448 MAP1BP46821 2468 aaKnown RBP10.02□□□□□ -0.81
HMHB1-201ENST00000289448 CACNA1BQ00975 2339 aa10.01□□□□□ -0.81
HMHB1-201ENST00000289448 CACNA1EQ15878 2313 aa10.01□□□□□ -0.81
HMHB1-201ENST00000289448 A0A1W2PQF6 199 aa10.01□□□□□ -0.81
HMHB1-201ENST00000289448 TCRBV21S2A2A0A5A6 115 aa10.01□□□□□ -0.81
HMHB1-201ENST00000289448 BCLAF3A2AJT9 711 aaKnown RBP10.01□□□□□ -0.81
HMHB1-201ENST00000289448 RNF225M0QZC1 329 aaPredicted RBP10.01□□□□□ -0.81
HMHB1-201ENST00000289448 O00370 1275 aa10.01□□□□□ -0.81
HMHB1-201ENST00000289448 BIN1O00499 593 aa10.01□□□□□ -0.81
HMHB1-201ENST00000289448 TM4SF5O14894 197 aa10.01□□□□□ -0.81
HMHB1-201ENST00000289448 RHOBTB1O94844 696 aa10.01□□□□□ -0.81
HMHB1-201ENST00000289448 RALAP11233 206 aa10.01□□□□□ -0.81
HMHB1-201ENST00000289448 CORO1AP31146 461 aaKnown RBP10.01□□□□□ -0.81
HMHB1-201ENST00000289448 GBP1P32455 592 aa10.01□□□□□ -0.81
HMHB1-201ENST00000289448 P2RY2P41231 377 aa10.01□□□□□ -0.81
HMHB1-201ENST00000289448 PSEN1P49768 467 aa10.01□□□□□ -0.81
HMHB1-201ENST00000289448 TKTL1P51854 596 aa10.01□□□□□ -0.81
HMHB1-201ENST00000289448 YWHAGP61981 247 aaKnown RBP eCLIP10.01□□□□□ -0.81
HMHB1-201ENST00000289448 CREB5Q02930 508 aa10.01□□□□□ -0.81
HMHB1-201ENST00000289448 EFEMP1Q12805 493 aa10.01□□□□□ -0.81
HMHB1-201ENST00000289448 ELF2Q15723 593 aa10.01□□□□□ -0.81
HMHB1-201ENST00000289448 HSF5Q4G112 596 aaPredicted RBP10.01□□□□□ -0.81
HMHB1-201ENST00000289448 AASDHQ4L235 1098 aaPredicted RBP10.01□□□□□ -0.81
HMHB1-201ENST00000289448 PKDCCQ504Y2 493 aa10.01□□□□□ -0.81
HMHB1-201ENST00000289448 EOGTQ5NDL2 527 aa10.01□□□□□ -0.81
HMHB1-201ENST00000289448 PMS2CLQ68D20 193 aa10.01□□□□□ -0.81
HMHB1-201ENST00000289448 GRAMD4Q6IC98 578 aa10.01□□□□□ -0.81
HMHB1-201ENST00000289448 KIAA1211LQ6NV74 962 aa10.01□□□□□ -0.81
HMHB1-201ENST00000289448 ZNF513Q8N8E2 541 aaPredicted RBP10.01□□□□□ -0.81
HMHB1-201ENST00000289448 HMGB4Q8WW32 186 aa10.01□□□□□ -0.81
HMHB1-201ENST00000289448 NELFBQ8WX92 580 aa10.01□□□□□ -0.81
HMHB1-201ENST00000289448 ERLEC1Q96DZ1 483 aa10.01□□□□□ -0.81
HMHB1-201ENST00000289448 GTPBP4Q9BZE4 634 aaKnown RBP10.01□□□□□ -0.81
HMHB1-201ENST00000289448 ULBP1Q9BZM6 244 aa10.01□□□□□ -0.81
HMHB1-201ENST00000289448 DNAI2Q9GZS0 605 aa10.01□□□□□ -0.81
HMHB1-201ENST00000289448 CD248Q9HCU0 757 aa10.01□□□□□ -0.81
HMHB1-201ENST00000289448 VPS45Q9NRW7 570 aa10.01□□□□□ -0.81
HMHB1-201ENST00000289448 WDR35Q9P2L0 1181 aa10.01□□□□□ -0.81
HMHB1-201ENST00000289448 MBD1Q9UIS9 605 aaPredicted RBP10.01□□□□□ -0.81
HMHB1-201ENST00000289448 HOOK1Q9UJC3 728 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms