RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 SIKE1Q9BRV8 207 aa10.4□□□□□ -0.74
HMGCR-201ENST00000287936 NFKBIZQ9BYH8 718 aa10.4□□□□□ -0.74
HMGCR-201ENST00000287936 PDZD7Q9H5P4 517 aa10.4□□□□□ -0.74
HMGCR-201ENST00000287936 RNPEPL1Q9HAU8 725 aa10.4□□□□□ -0.74
HMGCR-201ENST00000287936 DCDC2Q9UHG0 476 aa10.4□□□□□ -0.74
HMGCR-201ENST00000287936 NVLO15381 856 aaKnown RBP10.4□□□□□ -0.75
HMGCR-201ENST00000287936 ARF4P18085 180 aaPredicted RBP10.4□□□□□ -0.75
HMGCR-201ENST00000287936 SPRP35270 261 aaPredicted RBP10.4□□□□□ -0.75
HMGCR-201ENST00000287936 ALDH18A1P54886 795 aaKnown RBP10.4□□□□□ -0.75
HMGCR-201ENST00000287936 GDF10P55107 478 aa10.4□□□□□ -0.75
HMGCR-201ENST00000287936 UBAP2Q5T6F2 1119 aaKnown RBP10.4□□□□□ -0.75
HMGCR-201ENST00000287936 DENND5BQ6ZUT9 1274 aa10.4□□□□□ -0.75
HMGCR-201ENST00000287936 OXNAD1Q96HP4 312 aaPredicted RBP10.4□□□□□ -0.75
HMGCR-201ENST00000287936 PDGFDQ9GZP0 370 aaPredicted RBP10.4□□□□□ -0.75
HMGCR-201ENST00000287936 NRDE2Q9H7Z3 1164 aa10.4□□□□□ -0.75
HMGCR-201ENST00000287936 PCDH18Q9HCL0 1135 aa10.4□□□□□ -0.75
HMGCR-201ENST00000287936 SNTG2Q9NY99 539 aa10.4□□□□□ -0.75
HMGCR-201ENST00000287936 KCNK4Q9NYG8 393 aa10.4□□□□□ -0.75
HMGCR-201ENST00000287936 BCLAF3A2AJT9 711 aaKnown RBP10.39□□□□□ -0.75
HMGCR-201ENST00000287936 C2CD4BA6NLJ0 364 aa10.39□□□□□ -0.75
HMGCR-201ENST00000287936 F5H423 210 aaPredicted RBP10.39□□□□□ -0.75
HMGCR-201ENST00000287936 PSMD3O43242 534 aa10.39□□□□□ -0.75
HMGCR-201ENST00000287936 CD48P09326 243 aa10.39□□□□□ -0.75
HMGCR-201ENST00000287936 NCF2P19878 526 aaPredicted RBP10.39□□□□□ -0.75
HMGCR-201ENST00000287936 IL1R2P27930 398 aa10.39□□□□□ -0.75
HMGCR-201ENST00000287936 EPHB2P29323 1055 aa10.39□□□□□ -0.75
HMGCR-201ENST00000287936 VHLP40337 213 aa10.39□□□□□ -0.75
HMGCR-201ENST00000287936 GCLCP48506 637 aaPredicted RBP10.39□□□□□ -0.75
HMGCR-201ENST00000287936 FAM187BQ17R55 369 aa10.39□□□□□ -0.75
HMGCR-201ENST00000287936 KIZQ2M2Z5 673 aa10.39□□□□□ -0.75
HMGCR-201ENST00000287936 DCAF6Q58WW2 860 aa10.39□□□□□ -0.75
HMGCR-201ENST00000287936 SCUBE3Q8IX30 993 aa10.39□□□□□ -0.75
HMGCR-201ENST00000287936 LRRC52Q8N7C0 313 aa10.39□□□□□ -0.75
HMGCR-201ENST00000287936 HTR3CQ8WXA8 447 aa10.39□□□□□ -0.75
HMGCR-201ENST00000287936 GBP5Q96PP8 586 aa10.39□□□□□ -0.75
HMGCR-201ENST00000287936 EPAS1Q99814 870 aa10.39□□□□□ -0.75
HMGCR-201ENST00000287936 A0A0G2JLL6 359 aaPredicted RBP10.39□□□□□ -0.75
HMGCR-201ENST00000287936 FCHO1O14526 889 aa10.39□□□□□ -0.75
HMGCR-201ENST00000287936 OPHN1O60890 802 aa10.39□□□□□ -0.75
HMGCR-201ENST00000287936 MYL3P08590 195 aa10.39□□□□□ -0.75
HMGCR-201ENST00000287936 TMEM62Q0P6H9 643 aa10.39□□□□□ -0.75
HMGCR-201ENST00000287936 PCBP1Q15365 356 aaKnown RBP eCLIP10.39□□□□□ -0.75
HMGCR-201ENST00000287936 WLSQ5T9L3 541 aa10.39□□□□□ -0.75
HMGCR-201ENST00000287936 PRRT2Q7Z6L0 340 aaPredicted RBP10.39□□□□□ -0.75
HMGCR-201ENST00000287936 CHSY1Q86X52 802 aa10.39□□□□□ -0.75
HMGCR-201ENST00000287936 UBR7Q8N806 425 aa10.39□□□□□ -0.75
HMGCR-201ENST00000287936 MCUQ8NE86 351 aa10.39□□□□□ -0.75
HMGCR-201ENST00000287936 TRIM62Q9BVG3 475 aa10.39□□□□□ -0.75
HMGCR-201ENST00000287936 TBC1D10AQ9BXI6 508 aa10.39□□□□□ -0.75
HMGCR-201ENST00000287936 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.39□□□□□ -0.75
HMGCR-201ENST00000287936 MARCOQ9UEW3 520 aaPredicted RBP10.39□□□□□ -0.75
HMGCR-201ENST00000287936 TRIM33Q9UPN9 1127 aa10.39□□□□□ -0.75
HMGCR-201ENST00000287936 STRNO43815 780 aa10.39□□□□□ -0.75
HMGCR-201ENST00000287936 TGDSO95455 350 aa10.39□□□□□ -0.75
HMGCR-201ENST00000287936 SERPINB3P29508 390 aa10.39□□□□□ -0.75
HMGCR-201ENST00000287936 AXLP30530 894 aa10.39□□□□□ -0.75
HMGCR-201ENST00000287936 GPD2P43304 727 aa10.39□□□□□ -0.75
HMGCR-201ENST00000287936 HIRAP54198 1017 aaPredicted RBP10.39□□□□□ -0.75
HMGCR-201ENST00000287936 BMPR2Q13873 1038 aa10.39□□□□□ -0.75
HMGCR-201ENST00000287936 MPP2Q14168 576 aa10.39□□□□□ -0.75
HMGCR-201ENST00000287936 GLRA4Q5JXX5 417 aa10.39□□□□□ -0.75
HMGCR-201ENST00000287936 KCNT2Q6UVM3 1135 aa10.39□□□□□ -0.75
HMGCR-201ENST00000287936 SDCBP2Q9H190 292 aa10.39□□□□□ -0.75
HMGCR-201ENST00000287936 XYLT2Q9H1B5 865 aa10.39□□□□□ -0.75
HMGCR-201ENST00000287936 NDE1Q9NXR1 346 aa10.39□□□□□ -0.75
HMGCR-201ENST00000287936 ZNF180Q9UJW8 692 aa10.39□□□□□ -0.75
HMGCR-201ENST00000287936 SPDYE5A6NIY4 337 aa10.38□□□□□ -0.75
HMGCR-201ENST00000287936 C22orf31O95567 290 aa10.38□□□□□ -0.75
HMGCR-201ENST00000287936 OAS1P00973 400 aaKnown RBP10.38□□□□□ -0.75
HMGCR-201ENST00000287936 CCNB1P14635 433 aa10.38□□□□□ -0.75
HMGCR-201ENST00000287936 KDSRQ06136 332 aa10.38□□□□□ -0.75
HMGCR-201ENST00000287936 NBPF20Q3BBV1 942 aa10.38□□□□□ -0.75
HMGCR-201ENST00000287936 SPDYAQ5MJ70 313 aa10.38□□□□□ -0.75
HMGCR-201ENST00000287936 PRPF39Q86UA1 669 aaKnown RBP10.38□□□□□ -0.75
HMGCR-201ENST00000287936 PLD5Q8N7P1 536 aa10.38□□□□□ -0.75
HMGCR-201ENST00000287936 BANPQ8N9N5 519 aa10.38□□□□□ -0.75
HMGCR-201ENST00000287936 SPOCK2Q92563 424 aa10.38□□□□□ -0.75
HMGCR-201ENST00000287936 HSFY1Q96LI6 401 aa10.38□□□□□ -0.75
HMGCR-201ENST00000287936 SERPINI1Q99574 410 aa10.38□□□□□ -0.75
HMGCR-201ENST00000287936 FAM167BQ9BTA0 163 aa10.38□□□□□ -0.75
HMGCR-201ENST00000287936 SPC25Q9HBM1 224 aa10.38□□□□□ -0.75
HMGCR-201ENST00000287936 DCAF8L1A6NGE4 600 aa10.38□□□□□ -0.75
HMGCR-201ENST00000287936 MDM4O15151 490 aa10.38□□□□□ -0.75
HMGCR-201ENST00000287936 DYNC1LI2O43237 492 aaPredicted RBP10.38□□□□□ -0.75
HMGCR-201ENST00000287936 TMEM63AO94886 807 aa10.38□□□□□ -0.75
HMGCR-201ENST00000287936 MYCNP04198 464 aaPredicted RBP10.38□□□□□ -0.75
HMGCR-201ENST00000287936 SAT1P21673 171 aa10.38□□□□□ -0.75
HMGCR-201ENST00000287936 HIC1Q14526 733 aa10.38□□□□□ -0.75
HMGCR-201ENST00000287936 R3HDM1Q15032 1099 aaKnown RBP10.38□□□□□ -0.75
HMGCR-201ENST00000287936 CAPRIN2Q6IMN6 1127 aaKnown RBP10.38□□□□□ -0.75
HMGCR-201ENST00000287936 KYAT3Q6YP21 454 aaKnown RBP10.38□□□□□ -0.75
HMGCR-201ENST00000287936 KIAA0319LQ8IZA0 1049 aa10.38□□□□□ -0.75
HMGCR-201ENST00000287936 RAB3IL1Q8TBN0 382 aa10.38□□□□□ -0.75
HMGCR-201ENST00000287936 SLC38A7Q9NVC3 462 aa10.38□□□□□ -0.75
HMGCR-201ENST00000287936 NSMCE4AQ9NXX6 385 aa10.38□□□□□ -0.75
HMGCR-201ENST00000287936 SLC17A7Q9P2U7 560 aa10.38□□□□□ -0.75
HMGCR-201ENST00000287936 TAGLN3Q9UI15 199 aa10.38□□□□□ -0.75
HMGCR-201ENST00000287936 FARP1Q9Y4F1 1045 aaPredicted RBP10.38□□□□□ -0.75
HMGCR-201ENST00000287936 DPYSL4O14531 572 aa10.38□□□□□ -0.75
HMGCR-201ENST00000287936 TPSB2P20231 275 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms