RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 H3BRB1 525 aa10.9□□□□□ -0.66
ERCC3-201ENST00000285398 KLF11O14901 512 aa10.9□□□□□ -0.66
ERCC3-201ENST00000285398 VILLO15195 856 aa10.9□□□□□ -0.66
ERCC3-201ENST00000285398 CLPTM1O96005 669 aa10.9□□□□□ -0.66
ERCC3-201ENST00000285398 DHRS4L1P0CG22 281 aa10.9□□□□□ -0.66
ERCC3-201ENST00000285398 PRKAR2AP13861 404 aaKnown RBP10.9□□□□□ -0.66
ERCC3-201ENST00000285398 INSRRP14616 1297 aa10.9□□□□□ -0.66
ERCC3-201ENST00000285398 TMED1Q13445 227 aa10.9□□□□□ -0.66
ERCC3-201ENST00000285398 HIC1Q14526 733 aa10.9□□□□□ -0.66
ERCC3-201ENST00000285398 LRRC36Q1X8D7 754 aa10.9□□□□□ -0.66
ERCC3-201ENST00000285398 SFT2D3Q587I9 215 aa10.9□□□□□ -0.66
ERCC3-201ENST00000285398 EFHC1Q5JVL4 640 aa10.9□□□□□ -0.66
ERCC3-201ENST00000285398 RBM44Q6ZP01 1051 aaKnown RBP10.9□□□□□ -0.66
ERCC3-201ENST00000285398 ZBTB8BQ8NAP8 495 aaPredicted RBP10.9□□□□□ -0.66
ERCC3-201ENST00000285398 ATP11CQ8NB49 1132 aa10.9□□□□□ -0.66
ERCC3-201ENST00000285398 TRIM11Q96F44 468 aa10.9□□□□□ -0.66
ERCC3-201ENST00000285398 DNAJC1Q96KC8 554 aaKnown RBP10.9□□□□□ -0.66
ERCC3-201ENST00000285398 PCIF1Q9H4Z3 704 aa10.9□□□□□ -0.66
ERCC3-201ENST00000285398 TUT1Q9H6E5 874 aaKnown RBP10.9□□□□□ -0.66
ERCC3-201ENST00000285398 PPARGC1AQ9UBK2 798 aaKnown RBP10.9□□□□□ -0.66
ERCC3-201ENST00000285398 SH3GLB1Q9Y371 365 aa10.9□□□□□ -0.66
ERCC3-201ENST00000285398 ARHGAP10A1A4S6 786 aa10.89□□□□□ -0.67
ERCC3-201ENST00000285398 C2orf71A6NGG8 1288 aa10.89□□□□□ -0.67
ERCC3-201ENST00000285398 GOLGA8RI6L899 631 aa10.89□□□□□ -0.67
ERCC3-201ENST00000285398 DGAT1O75907 488 aa10.89□□□□□ -0.67
ERCC3-201ENST00000285398 PGM3O95394 542 aa10.89□□□□□ -0.67
ERCC3-201ENST00000285398 MT-ND3P03897 115 aa10.89□□□□□ -0.67
ERCC3-201ENST00000285398 MAGEA10P43363 369 aaPredicted RBP10.89□□□□□ -0.67
ERCC3-201ENST00000285398 NOP14P78316 857 aaKnown RBP10.89□□□□□ -0.67
ERCC3-201ENST00000285398 IQSEC1Q6DN90 963 aa10.89□□□□□ -0.67
ERCC3-201ENST00000285398 UGT2A3Q6UWM9 527 aa10.89□□□□□ -0.67
ERCC3-201ENST00000285398 KATNAL2Q8IYT4 538 aa10.89□□□□□ -0.67
ERCC3-201ENST00000285398 ICA1LQ8NDH6 482 aa10.89□□□□□ -0.67
ERCC3-201ENST00000285398 EXD1Q8NHP7 514 aa10.89□□□□□ -0.67
ERCC3-201ENST00000285398 FBXO27Q8NI29 283 aa10.89□□□□□ -0.67
ERCC3-201ENST00000285398 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.89□□□□□ -0.67
ERCC3-201ENST00000285398 DIS3LQ8TF46 1054 aaKnown RBP10.89□□□□□ -0.67
ERCC3-201ENST00000285398 JADE3Q92613 823 aa10.89□□□□□ -0.67
ERCC3-201ENST00000285398 TTC17Q96AE7 1141 aa10.89□□□□□ -0.67
ERCC3-201ENST00000285398 ZFRQ96KR1 1074 aaKnown RBP10.89□□□□□ -0.67
ERCC3-201ENST00000285398 CBWD1Q9BRT8 395 aa10.89□□□□□ -0.67
ERCC3-201ENST00000285398 DHRS4Q9BTZ2 278 aa10.89□□□□□ -0.67
ERCC3-201ENST00000285398 SMARCAD1Q9H4L7 1026 aa10.89□□□□□ -0.67
ERCC3-201ENST00000285398 TMEM206Q9H813 350 aa10.89□□□□□ -0.67
ERCC3-201ENST00000285398 LRRIQ4A6NIV6 560 aa10.89□□□□□ -0.67
ERCC3-201ENST00000285398 I3L4J1 428 aa10.89□□□□□ -0.67
ERCC3-201ENST00000285398 TXNDC9O14530 226 aa10.89□□□□□ -0.67
ERCC3-201ENST00000285398 LIASO43766 372 aa10.89□□□□□ -0.67
ERCC3-201ENST00000285398 SRGAP2CP0DJJ0 459 aa10.89□□□□□ -0.67
ERCC3-201ENST00000285398 BGNP21810 368 aa10.89□□□□□ -0.67
ERCC3-201ENST00000285398 AQP4P55087 323 aa10.89□□□□□ -0.67
ERCC3-201ENST00000285398 TMEM62Q0P6H9 643 aa10.89□□□□□ -0.67
ERCC3-201ENST00000285398 DLG1Q12959 904 aa10.89□□□□□ -0.67
ERCC3-201ENST00000285398 CBX3Q13185 183 aa10.89□□□□□ -0.67
ERCC3-201ENST00000285398 IRF5Q13568 498 aa10.89□□□□□ -0.67
ERCC3-201ENST00000285398 HIF1AQ16665 826 aa10.89□□□□□ -0.67
ERCC3-201ENST00000285398 DRICH1Q6PGQ1 229 aaPredicted RBP10.89□□□□□ -0.67
ERCC3-201ENST00000285398 HAUS6Q7Z4H7 955 aa10.89□□□□□ -0.67
ERCC3-201ENST00000285398 PRPF39Q86UA1 669 aaKnown RBP10.89□□□□□ -0.67
ERCC3-201ENST00000285398 TREML1Q86YW5 311 aa10.89□□□□□ -0.67
ERCC3-201ENST00000285398 SLC25A41Q8N5S1 370 aa10.89□□□□□ -0.67
ERCC3-201ENST00000285398 XXYLT1Q8NBI6 393 aa10.89□□□□□ -0.67
ERCC3-201ENST00000285398 HELQQ8TDG4 1101 aa10.89□□□□□ -0.67
ERCC3-201ENST00000285398 GDPD5Q8WTR4 605 aa10.89□□□□□ -0.67
ERCC3-201ENST00000285398 PYROXD1Q8WU10 500 aa10.89□□□□□ -0.67
ERCC3-201ENST00000285398 MZB1Q8WU39 189 aa10.89□□□□□ -0.67
ERCC3-201ENST00000285398 DHX33Q9H6R0 707 aaKnown RBP10.89□□□□□ -0.67
ERCC3-201ENST00000285398 ACSS3Q9H6R3 686 aa10.89□□□□□ -0.67
ERCC3-201ENST00000285398 PCDH18Q9HCL0 1135 aa10.89□□□□□ -0.67
ERCC3-201ENST00000285398 PDLIM7Q9NR12 457 aa10.89□□□□□ -0.67
ERCC3-201ENST00000285398 NRBP2Q9NSY0 501 aa10.89□□□□□ -0.67
ERCC3-201ENST00000285398 SETD4Q9NVD3 440 aa10.89□□□□□ -0.67
ERCC3-201ENST00000285398 ERAP1Q9NZ08 941 aa10.89□□□□□ -0.67
ERCC3-201ENST00000285398 SOX13Q9UN79 622 aa10.89□□□□□ -0.67
ERCC3-201ENST00000285398 DMTF1Q9Y222 760 aa10.89□□□□□ -0.67
ERCC3-201ENST00000285398 GINS2Q9Y248 185 aa10.89□□□□□ -0.67
ERCC3-201ENST00000285398 C15orf38-AP3S2A0A0A6YYH1 394 aa10.88□□□□□ -0.67
ERCC3-201ENST00000285398 IQANK1A0A1B0GTG1 560 aa10.88□□□□□ -0.67
ERCC3-201ENST00000285398 PROSCO94903 275 aa10.88□□□□□ -0.67
ERCC3-201ENST00000285398 MYL3P08590 195 aa10.88□□□□□ -0.67
ERCC3-201ENST00000285398 CDK4P11802 303 aa10.88□□□□□ -0.67
ERCC3-201ENST00000285398 STIP1P31948 543 aaKnown RBP10.88□□□□□ -0.67
ERCC3-201ENST00000285398 GTF2H1P32780 548 aa10.88□□□□□ -0.67
ERCC3-201ENST00000285398 ETV4P43268 484 aa10.88□□□□□ -0.67
ERCC3-201ENST00000285398 SERPINB8P50452 374 aa10.88□□□□□ -0.67
ERCC3-201ENST00000285398 CLCN2P51788 898 aa10.88□□□□□ -0.67
ERCC3-201ENST00000285398 GPX6P59796 221 aa10.88□□□□□ -0.67
ERCC3-201ENST00000285398 ZNF200P98182 395 aaPredicted RBP10.88□□□□□ -0.67
ERCC3-201ENST00000285398 FOXD4Q12950 439 aaPredicted RBP10.88□□□□□ -0.67
ERCC3-201ENST00000285398 MSLNQ13421 630 aaPredicted RBP10.88□□□□□ -0.67
ERCC3-201ENST00000285398 ALCAMQ13740 583 aa10.88□□□□□ -0.67
ERCC3-201ENST00000285398 TFDP1Q14186 410 aa10.88□□□□□ -0.67
ERCC3-201ENST00000285398 TARBP2Q15633 366 aaKnown RBP10.88□□□□□ -0.67
ERCC3-201ENST00000285398 RNASEH2BQ5TBB1 312 aaKnown RBP10.88□□□□□ -0.67
ERCC3-201ENST00000285398 KLHDC10Q6PID8 442 aa10.88□□□□□ -0.67
ERCC3-201ENST00000285398 C3orf62Q6ZUJ4 267 aa10.88□□□□□ -0.67
ERCC3-201ENST00000285398 ARPINQ7Z6K5 226 aa10.88□□□□□ -0.67
ERCC3-201ENST00000285398 PCGF5Q86SE9 256 aa10.88□□□□□ -0.67
ERCC3-201ENST00000285398 MCOLN2Q8IZK6 566 aa10.88□□□□□ -0.67
ERCC3-201ENST00000285398 ALLCQ8N6M5 410 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms