RNA–Protein interactions for RNA: ENST00000269967.3

CCDC97-201, Transcript of coiled-coil domain containing 97, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC97, Length 3,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97-201ENST00000269967 USH1CQ9Y6N9 552 aa13.8□□□□□ -0.2
CCDC97-201ENST00000269967 DNAJC25-GNG10A0A024R161 153 aa13.8□□□□□ -0.2
CCDC97-201ENST00000269967 ADCY6O43306 1168 aa13.8□□□□□ -0.2
CCDC97-201ENST00000269967 SRGAP2BP0DMP2 458 aa13.8□□□□□ -0.2
CCDC97-201ENST00000269967 KDSRQ06136 332 aa13.8□□□□□ -0.2
CCDC97-201ENST00000269967 CCL14Q16627 93 aa13.8□□□□□ -0.2
CCDC97-201ENST00000269967 CCDC91Q7Z6B0 441 aa13.8□□□□□ -0.2
CCDC97-201ENST00000269967 ZNF354CQ86Y25 554 aa13.8□□□□□ -0.2
CCDC97-201ENST00000269967 SLC7A14Q8TBB6 771 aa13.8□□□□□ -0.2
CCDC97-201ENST00000269967 MCRS1Q96EZ8 462 aa13.8□□□□□ -0.2
CCDC97-201ENST00000269967 TRIM55Q9BYV6 548 aa13.8□□□□□ -0.2
CCDC97-201ENST00000269967 CHKBQ9Y259 395 aa13.8□□□□□ -0.2
CCDC97-201ENST00000269967 LTBP3Q9NS15 1303 aa13.8□□□□□ -0.2
CCDC97-201ENST00000269967 FAM237BA0A1B0GVD1 139 aa13.79□□□□□ -0.2
CCDC97-201ENST00000269967 CASTOR2A6NHX0 329 aa13.79□□□□□ -0.2
CCDC97-201ENST00000269967 SRRM3A6NNA2 597 aaPredicted RBP13.79□□□□□ -0.2
CCDC97-201ENST00000269967 CHRM1P11229 460 aaPredicted RBP13.79□□□□□ -0.2
CCDC97-201ENST00000269967 SERPINB3P29508 390 aa13.79□□□□□ -0.2
CCDC97-201ENST00000269967 ARFIP2P53365 341 aa13.79□□□□□ -0.2
CCDC97-201ENST00000269967 HDAC4P56524 1084 aa13.79□□□□□ -0.2
CCDC97-201ENST00000269967 NR1H3Q13133 447 aa13.79□□□□□ -0.2
CCDC97-201ENST00000269967 SLC27A1Q6PCB7 646 aa13.79□□□□□ -0.2
CCDC97-201ENST00000269967 LCLAT1Q6UWP7 414 aa13.79□□□□□ -0.2
CCDC97-201ENST00000269967 PIGZQ86VD9 579 aa13.79□□□□□ -0.2
CCDC97-201ENST00000269967 FAM228AQ86W67 206 aa13.79□□□□□ -0.2
CCDC97-201ENST00000269967 DTX3LQ8TDB6 740 aa13.79□□□□□ -0.2
CCDC97-201ENST00000269967 WDR83Q9BRX9 315 aaKnown RBP13.79□□□□□ -0.2
CCDC97-201ENST00000269967 ACSS3Q9H6R3 686 aa13.79□□□□□ -0.2
CCDC97-201ENST00000269967 CYP3A43Q9HB55 503 aa13.79□□□□□ -0.2
CCDC97-201ENST00000269967 WDR27A2RRH5 827 aa13.79□□□□□ -0.2
CCDC97-201ENST00000269967 SPTLC1O15269 473 aa13.79□□□□□ -0.2
CCDC97-201ENST00000269967 KRT37O76014 449 aa13.79□□□□□ -0.2
CCDC97-201ENST00000269967 CELF2O95319 508 aaKnown RBP13.79□□□□□ -0.2
CCDC97-201ENST00000269967 MMP3P08254 477 aa13.79□□□□□ -0.2
CCDC97-201ENST00000269967 AFF1P51825 1210 aaKnown RBP13.79□□□□□ -0.2
CCDC97-201ENST00000269967 CACNB2Q08289 660 aaPredicted RBP13.79□□□□□ -0.2
CCDC97-201ENST00000269967 XRCC4Q13426 336 aa13.79□□□□□ -0.2
CCDC97-201ENST00000269967 NOMO1Q15155 1222 aa13.79□□□□□ -0.2
CCDC97-201ENST00000269967 WSCD1Q658N2 575 aa13.79□□□□□ -0.2
CCDC97-201ENST00000269967 TTC7BQ86TV6 843 aa13.79□□□□□ -0.2
CCDC97-201ENST00000269967 LONP2Q86WA8 852 aa13.79□□□□□ -0.2
CCDC97-201ENST00000269967 PPTC7Q8NI37 304 aa13.79□□□□□ -0.2
CCDC97-201ENST00000269967 NPLOC4Q8TAT6 608 aa13.79□□□□□ -0.2
CCDC97-201ENST00000269967 SMYD2Q9NRG4 433 aa13.79□□□□□ -0.2
CCDC97-201ENST00000269967 PAK5Q9P286 719 aa13.79□□□□□ -0.2
CCDC97-201ENST00000269967 KLHL8Q9P2G9 620 aaPredicted RBP13.79□□□□□ -0.2
CCDC97-201ENST00000269967 PPARGC1AQ9UBK2 798 aaKnown RBP13.79□□□□□ -0.2
CCDC97-201ENST00000269967 GGA2Q9UJY4 613 aa13.79□□□□□ -0.2
CCDC97-201ENST00000269967 UPP2O95045 317 aa13.79□□□□□ -0.2
CCDC97-201ENST00000269967 SMIM10L2AP0DMW4 78 aa13.79□□□□□ -0.2
CCDC97-201ENST00000269967 SMIM10L2BP0DMW5 78 aa13.79□□□□□ -0.2
CCDC97-201ENST00000269967 ATICP31939 592 aa13.79□□□□□ -0.2
CCDC97-201ENST00000269967 PGGT1BP53609 377 aa13.79□□□□□ -0.2
CCDC97-201ENST00000269967 CLNS1AP54105 237 aaKnown RBP13.79□□□□□ -0.2
CCDC97-201ENST00000269967 RWDD4Q6NW29 188 aaKnown RBP13.79□□□□□ -0.2
CCDC97-201ENST00000269967 BRI3BPQ8WY22 251 aa13.79□□□□□ -0.2
CCDC97-201ENST00000269967 VPS11Q9H270 941 aa13.79□□□□□ -0.2
CCDC97-201ENST00000269967 NRDE2Q9H7Z3 1164 aa13.79□□□□□ -0.2
CCDC97-201ENST00000269967 LGALS13Q9UHV8 139 aa13.79□□□□□ -0.2
CCDC97-201ENST00000269967 SMIM28A0A1B0GU29 152 aa13.78□□□□□ -0.2
CCDC97-201ENST00000269967 MYL2P10916 166 aa13.78□□□□□ -0.2
CCDC97-201ENST00000269967 TPH1P17752 444 aa13.78□□□□□ -0.2
CCDC97-201ENST00000269967 MLH1P40692 756 aa13.78□□□□□ -0.2
CCDC97-201ENST00000269967 CHI3L2Q15782 390 aa13.78□□□□□ -0.2
CCDC97-201ENST00000269967 CDHR3Q6ZTQ4 885 aa13.78□□□□□ -0.2
CCDC97-201ENST00000269967 GBP7Q8N8V2 638 aaPredicted RBP13.78□□□□□ -0.2
CCDC97-201ENST00000269967 NSMCE1Q8WV22 266 aa13.78□□□□□ -0.2
CCDC97-201ENST00000269967 SRPK1Q96SB4 655 aaKnown RBP13.78□□□□□ -0.2
CCDC97-201ENST00000269967 KCNK16Q96T55 309 aa13.78□□□□□ -0.2
CCDC97-201ENST00000269967 FOXP3Q9BZS1 431 aa13.78□□□□□ -0.2
CCDC97-201ENST00000269967 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.78□□□□□ -0.2
CCDC97-201ENST00000269967 FARP1Q9Y4F1 1045 aaPredicted RBP13.78□□□□□ -0.2
CCDC97-201ENST00000269967 SNX10Q9Y5X0 201 aa13.78□□□□□ -0.2
CCDC97-201ENST00000269967 NEBLO76041 1014 aa13.78□□□□□ -0.2
CCDC97-201ENST00000269967 ANP32DO95626 131 aa13.78□□□□□ -0.2
CCDC97-201ENST00000269967 MYCP01106 439 aaPredicted RBP13.78□□□□□ -0.2
CCDC97-201ENST00000269967 NCAM1P13591 858 aa13.78□□□□□ -0.2
CCDC97-201ENST00000269967 HOXA11P31270 313 aaPredicted RBP13.78□□□□□ -0.2
CCDC97-201ENST00000269967 CDH5P33151 784 aaPredicted RBP13.78□□□□□ -0.2
CCDC97-201ENST00000269967 PDK4Q16654 411 aa13.78□□□□□ -0.2
CCDC97-201ENST00000269967 TNFAIP8L3Q5GJ75 292 aa13.78□□□□□ -0.2
CCDC97-201ENST00000269967 DSTYKQ6XUX3 929 aa13.78□□□□□ -0.2
CCDC97-201ENST00000269967 NUDCD3Q8IVD9 361 aa13.78□□□□□ -0.2
CCDC97-201ENST00000269967 ADGRF2Q8IZF7 708 aa13.78□□□□□ -0.2
CCDC97-201ENST00000269967 RIBC1Q8N443 379 aaPredicted RBP13.78□□□□□ -0.2
CCDC97-201ENST00000269967 NIPA2Q8N8Q9 360 aa13.78□□□□□ -0.2
CCDC97-201ENST00000269967 RHOBTB2Q9BYZ6 727 aa13.78□□□□□ -0.2
CCDC97-201ENST00000269967 SLC24A2Q9UI40 661 aa13.78□□□□□ -0.2
CCDC97-201ENST00000269967 EDF1O60869 148 aaKnown RBP13.77□□□□□ -0.2
CCDC97-201ENST00000269967 BEST1O76090 585 aa13.77□□□□□ -0.2
CCDC97-201ENST00000269967 PFKMP08237 780 aa13.77□□□□□ -0.2
CCDC97-201ENST00000269967 ALDH18A1P54886 795 aaKnown RBP13.77□□□□□ -0.2
CCDC97-201ENST00000269967 SLC10A2Q12908 348 aaPredicted RBP13.77□□□□□ -0.2
CCDC97-201ENST00000269967 LACTB2Q53H82 288 aaPredicted RBP13.77□□□□□ -0.2
CCDC97-201ENST00000269967 TLK2Q86UE8 772 aa13.77□□□□□ -0.2
CCDC97-201ENST00000269967 PQLC3Q8N755 202 aa13.77□□□□□ -0.2
CCDC97-201ENST00000269967 HIPK4Q8NE63 616 aa13.77□□□□□ -0.2
CCDC97-201ENST00000269967 PRR11Q96HE9 360 aaPredicted RBP13.77□□□□□ -0.2
CCDC97-201ENST00000269967 CELF6Q96J87 481 aaKnown RBP13.77□□□□□ -0.2
CCDC97-201ENST00000269967 MAML3Q96JK9 1138 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms