RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 FUT10Q6P4F1 479 aa12.04□□□□□ -0.48
SCAF11-201ENST00000266589 CNKSR3Q6P9H4 555 aa12.04□□□□□ -0.48
SCAF11-201ENST00000266589 NPNTQ6UXI9 565 aa12.04□□□□□ -0.48
SCAF11-201ENST00000266589 IQCKQ8N0W5 287 aa12.04□□□□□ -0.48
SCAF11-201ENST00000266589 LRRC43Q8N309 656 aa12.04□□□□□ -0.48
SCAF11-201ENST00000266589 SLC7A14Q8TBB6 771 aa12.04□□□□□ -0.48
SCAF11-201ENST00000266589 FAM71BQ8TC56 605 aa12.04□□□□□ -0.48
SCAF11-201ENST00000266589 CCHCR1Q8TD31 782 aa12.04□□□□□ -0.48
SCAF11-201ENST00000266589 UBLCP1Q8WVY7 318 aaPredicted RBP12.04□□□□□ -0.48
SCAF11-201ENST00000266589 IRGQQ8WZA9 623 aa12.04□□□□□ -0.48
SCAF11-201ENST00000266589 ARMC5Q96C12 935 aa12.04□□□□□ -0.48
SCAF11-201ENST00000266589 B3GALT6Q96L58 329 aa12.04□□□□□ -0.48
SCAF11-201ENST00000266589 TMEM175Q9BSA9 504 aa12.04□□□□□ -0.48
SCAF11-201ENST00000266589 TXLNGYQ9BZA5 131 aa12.04□□□□□ -0.48
SCAF11-201ENST00000266589 COL4A4P53420 1690 aaPredicted RBP12.03□□□□□ -0.48
SCAF11-201ENST00000266589 NT5C1B-RDH14C9J2C7 533 aa12.03□□□□□ -0.48
SCAF11-201ENST00000266589 APOL1O14791 398 aa12.03□□□□□ -0.48
SCAF11-201ENST00000266589 MCF2LO15068 1137 aa12.03□□□□□ -0.48
SCAF11-201ENST00000266589 POLR3GO15318 223 aaPredicted RBP12.03□□□□□ -0.48
SCAF11-201ENST00000266589 GALTP07902 379 aa12.03□□□□□ -0.48
SCAF11-201ENST00000266589 ZSCAN5DPP0CG00 497 aa12.03□□□□□ -0.48
SCAF11-201ENST00000266589 ETS1P14921 441 aa12.03□□□□□ -0.48
SCAF11-201ENST00000266589 ITGA8P53708 1063 aa12.03□□□□□ -0.48
SCAF11-201ENST00000266589 EIF3EP60228 445 aaKnown RBP12.03□□□□□ -0.48
SCAF11-201ENST00000266589 IKBKEQ14164 716 aa12.03□□□□□ -0.48
SCAF11-201ENST00000266589 NOMO1Q15155 1222 aa12.03□□□□□ -0.48
SCAF11-201ENST00000266589 PM20D1Q6GTS8 502 aa12.03□□□□□ -0.48
SCAF11-201ENST00000266589 ZNF280DQ6N043 979 aa12.03□□□□□ -0.48
SCAF11-201ENST00000266589 SCML4Q8N228 414 aa12.03□□□□□ -0.48
SCAF11-201ENST00000266589 PQLC3Q8N755 202 aa12.03□□□□□ -0.48
SCAF11-201ENST00000266589 PCDH19Q8TAB3 1148 aa12.03□□□□□ -0.48
SCAF11-201ENST00000266589 SCAMP5Q8TAC9 235 aa12.03□□□□□ -0.48
SCAF11-201ENST00000266589 ADAM32Q8TC27 787 aa12.03□□□□□ -0.48
SCAF11-201ENST00000266589 EDEM1Q92611 657 aa12.03□□□□□ -0.48
SCAF11-201ENST00000266589 P3H4Q92791 437 aa12.03□□□□□ -0.48
SCAF11-201ENST00000266589 FAF2Q96CS3 445 aa12.03□□□□□ -0.48
SCAF11-201ENST00000266589 KCTD15Q96SI1 283 aaPredicted RBP12.03□□□□□ -0.48
SCAF11-201ENST00000266589 MAGEB5Q9BZ81 275 aa12.03□□□□□ -0.48
SCAF11-201ENST00000266589 C11orf49Q9H6J7 331 aa12.03□□□□□ -0.48
SCAF11-201ENST00000266589 C10orf88Q9H8K7 445 aa12.03□□□□□ -0.48
SCAF11-201ENST00000266589 PIGVQ9NUD9 493 aa12.03□□□□□ -0.48
SCAF11-201ENST00000266589 MTMR10Q9NXD2 777 aa12.03□□□□□ -0.48
SCAF11-201ENST00000266589 FZD10Q9ULW2 581 aa12.03□□□□□ -0.48
SCAF11-201ENST00000266589 PLAAQ9Y263 795 aa12.03□□□□□ -0.48
SCAF11-201ENST00000266589 USP3Q9Y6I4 520 aa12.03□□□□□ -0.48
SCAF11-201ENST00000266589 ZNF487B1APH4 448 aa12.02□□□□□ -0.48
SCAF11-201ENST00000266589 IFNB1P01574 187 aa12.02□□□□□ -0.48
SCAF11-201ENST00000266589 TGM2P21980 687 aa12.02□□□□□ -0.48
SCAF11-201ENST00000266589 FGFR3P22607 806 aa12.02□□□□□ -0.48
SCAF11-201ENST00000266589 SLC5A3P53794 718 aa12.02□□□□□ -0.48
SCAF11-201ENST00000266589 IFRD2Q12894 506 aaPredicted RBP12.02□□□□□ -0.48
SCAF11-201ENST00000266589 MRPL58Q14197 206 aaKnown RBP12.02□□□□□ -0.48
SCAF11-201ENST00000266589 NFE2Q16621 373 aaPredicted RBP12.02□□□□□ -0.48
SCAF11-201ENST00000266589 LRRC26Q2I0M4 334 aa12.02□□□□□ -0.48
SCAF11-201ENST00000266589 P3H1Q32P28 736 aa12.02□□□□□ -0.48
SCAF11-201ENST00000266589 IZUMO3Q5VZ72 239 aa12.02□□□□□ -0.48
SCAF11-201ENST00000266589 SLC9A4Q6AI14 798 aa12.02□□□□□ -0.48
SCAF11-201ENST00000266589 C1orf228Q6PIY5 440 aa12.02□□□□□ -0.48
SCAF11-201ENST00000266589 TMEM173Q86WV6 379 aaPredicted RBP12.02□□□□□ -0.48
SCAF11-201ENST00000266589 SCN4BQ8IWT1 228 aa12.02□□□□□ -0.48
SCAF11-201ENST00000266589 PYROXD2Q8N2H3 581 aa12.02□□□□□ -0.48
SCAF11-201ENST00000266589 PLD5Q8N7P1 536 aa12.02□□□□□ -0.48
SCAF11-201ENST00000266589 ANKLE1Q8NAG6 615 aa12.02□□□□□ -0.48
SCAF11-201ENST00000266589 BBOF1Q8ND07 529 aa12.02□□□□□ -0.48
SCAF11-201ENST00000266589 PAWRQ96IZ0 340 aaKnown RBP12.02□□□□□ -0.48
SCAF11-201ENST00000266589 PGLYRP2Q96PD5 576 aa12.02□□□□□ -0.48
SCAF11-201ENST00000266589 ANAPC5Q9UJX4 755 aa12.02□□□□□ -0.48
SCAF11-201ENST00000266589 LTBP2Q14767 1821 aa12.02□□□□□ -0.48
SCAF11-201ENST00000266589 OR6C75A6NL08 312 aa12.02□□□□□ -0.49
SCAF11-201ENST00000266589 RBP3P10745 1247 aa12.02□□□□□ -0.49
SCAF11-201ENST00000266589 HSPA8P11142 646 aaKnown RBP12.02□□□□□ -0.49
SCAF11-201ENST00000266589 PMS2P54278 862 aa12.02□□□□□ -0.49
SCAF11-201ENST00000266589 GDF10P55107 478 aa12.02□□□□□ -0.49
SCAF11-201ENST00000266589 CAV1Q03135 178 aa12.02□□□□□ -0.49
SCAF11-201ENST00000266589 ELAVL2Q12926 359 aaKnown RBP12.02□□□□□ -0.49
SCAF11-201ENST00000266589 BSPRYQ5W0U4 402 aa12.02□□□□□ -0.49
SCAF11-201ENST00000266589 RHBDF2Q6PJF5 856 aa12.02□□□□□ -0.49
SCAF11-201ENST00000266589 ZC3H18Q86VM9 953 aaKnown RBP12.02□□□□□ -0.49
SCAF11-201ENST00000266589 PSTKQ8IV42 348 aaKnown RBP12.02□□□□□ -0.49
SCAF11-201ENST00000266589 GOLGA6L1Q8N7Z2 621 aa12.02□□□□□ -0.49
SCAF11-201ENST00000266589 RSAD2Q8WXG1 361 aa12.02□□□□□ -0.49
SCAF11-201ENST00000266589 VWCEQ96DN2 955 aa12.02□□□□□ -0.49
SCAF11-201ENST00000266589 FUBP3Q96I24 572 aaKnown RBP eCLIP12.02□□□□□ -0.49
SCAF11-201ENST00000266589 CSPG4P5Q96PW8 444 aa12.02□□□□□ -0.49
SCAF11-201ENST00000266589 SH3GL2Q99962 352 aa12.02□□□□□ -0.49
SCAF11-201ENST00000266589 FAM204AQ9H8W3 233 aa12.02□□□□□ -0.49
SCAF11-201ENST00000266589 PCDH9Q9HC56 1237 aa12.02□□□□□ -0.49
SCAF11-201ENST00000266589 TMPRSS4Q9NRS4 437 aa12.02□□□□□ -0.49
SCAF11-201ENST00000266589 DDIT4Q9NX09 232 aa12.02□□□□□ -0.49
SCAF11-201ENST00000266589 RRN3Q9NYV6 651 aa12.02□□□□□ -0.49
SCAF11-201ENST00000266589 HEY1Q9Y5J3 304 aa12.02□□□□□ -0.49
SCAF11-201ENST00000266589 ZNF638Q14966 1978 aaKnown RBP12.02□□□□□ -0.49
SCAF11-201ENST00000266589 TNFRSF10BO14763 440 aa12.01□□□□□ -0.49
SCAF11-201ENST00000266589 OPA1O60313 960 aa12.01□□□□□ -0.49
SCAF11-201ENST00000266589 RNF40O75150 1001 aa12.01□□□□□ -0.49
SCAF11-201ENST00000266589 RFC2P35250 354 aa12.01□□□□□ -0.49
SCAF11-201ENST00000266589 ROR1Q01973 937 aa12.01□□□□□ -0.49
SCAF11-201ENST00000266589 GPS1Q13098 491 aa12.01□□□□□ -0.49
SCAF11-201ENST00000266589 SLMAPQ14BN4 828 aa12.01□□□□□ -0.49
SCAF11-201ENST00000266589 SPDYCQ5MJ68 293 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms