RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 SLIT3O75094 1523 aa17.65■□□□□ 0.42
SRF-201ENST00000265354 TOP3BO95985 862 aaKnown RBP17.65■□□□□ 0.42
SRF-201ENST00000265354 UTS2BQ765I0 119 aa17.65■□□□□ 0.42
SRF-201ENST00000265354 GMCL1P1Q8NEA9 526 aa17.65■□□□□ 0.42
SRF-201ENST00000265354 ATP6V1E2Q96A05 226 aa17.65■□□□□ 0.42
SRF-201ENST00000265354 ILKAPQ9H0C8 392 aaPredicted RBP17.65■□□□□ 0.42
SRF-201ENST00000265354 EBF3Q9H4W6 596 aa17.65■□□□□ 0.42
SRF-201ENST00000265354 CCDC134Q9H6E4 229 aa17.65■□□□□ 0.42
SRF-201ENST00000265354 WDR35Q9P2L0 1181 aa17.65■□□□□ 0.42
SRF-201ENST00000265354 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.64■□□□□ 0.42
SRF-201ENST00000265354 POLBP06746 335 aa17.64■□□□□ 0.42
SRF-201ENST00000265354 PSMC3P17980 439 aa17.64■□□□□ 0.42
SRF-201ENST00000265354 TUBP50607 506 aa17.64■□□□□ 0.42
SRF-201ENST00000265354 STRA8Q7Z7C7 330 aa17.64■□□□□ 0.42
SRF-201ENST00000265354 CCDC60Q8IWA6 550 aaPredicted RBP17.64■□□□□ 0.42
SRF-201ENST00000265354 ADAM32Q8TC27 787 aa17.64■□□□□ 0.42
SRF-201ENST00000265354 HPDLQ96IR7 371 aa17.64■□□□□ 0.42
SRF-201ENST00000265354 ZNF333Q96JL9 665 aa17.64■□□□□ 0.42
SRF-201ENST00000265354 TIPINQ9BVW5 301 aa17.64■□□□□ 0.42
SRF-201ENST00000265354 IGLV3-22A0A075B6J6 115 aa17.64■□□□□ 0.41
SRF-201ENST00000265354 MOCS2O96007 188 aaPredicted RBP17.64■□□□□ 0.41
SRF-201ENST00000265354 ALADP13716 330 aa17.64■□□□□ 0.41
SRF-201ENST00000265354 MGAT1P26572 445 aa17.64■□□□□ 0.41
SRF-201ENST00000265354 CATSPER4Q7RTX7 472 aa17.64■□□□□ 0.41
SRF-201ENST00000265354 ERLEC1Q96DZ1 483 aa17.64■□□□□ 0.41
SRF-201ENST00000265354 CHST12Q9NRB3 414 aa17.64■□□□□ 0.41
SRF-201ENST00000265354 ROBO3Q96MS0 1386 aa17.64■□□□□ 0.41
SRF-201ENST00000265354 UBR1Q8IWV7 1749 aa17.64■□□□□ 0.41
SRF-201ENST00000265354 ARHGEF37A1IGU5 675 aa17.64■□□□□ 0.41
SRF-201ENST00000265354 UGT1A9O60656 530 aa17.64■□□□□ 0.41
SRF-201ENST00000265354 PLK1P53350 603 aa17.64■□□□□ 0.41
SRF-201ENST00000265354 RTP1P59025 263 aa17.64■□□□□ 0.41
SRF-201ENST00000265354 KCTD2Q14681 263 aa17.64■□□□□ 0.41
SRF-201ENST00000265354 DCAF15Q66K64 600 aa17.64■□□□□ 0.41
SRF-201ENST00000265354 UGT1A7Q9HAW7 530 aa17.64■□□□□ 0.41
SRF-201ENST00000265354 UGT1A10Q9HAW8 530 aa17.64■□□□□ 0.41
SRF-201ENST00000265354 UGT1A8Q9HAW9 530 aa17.64■□□□□ 0.41
SRF-201ENST00000265354 NPTXRO95502 500 aa17.64■□□□□ 0.41
SRF-201ENST00000265354 PEX2P28328 305 aa17.64■□□□□ 0.41
SRF-201ENST00000265354 NCKAP1LP55160 1127 aa17.64■□□□□ 0.41
SRF-201ENST00000265354 PGM5Q15124 567 aa17.64■□□□□ 0.41
SRF-201ENST00000265354 ZC3H12AQ5D1E8 599 aaKnown RBP17.64■□□□□ 0.41
SRF-201ENST00000265354 ATF7IP2Q5U623 682 aa17.64■□□□□ 0.41
SRF-201ENST00000265354 CMC1Q7Z7K0 106 aa17.64■□□□□ 0.41
SRF-201ENST00000265354 DHDDSQ86SQ9 333 aa17.64■□□□□ 0.41
SRF-201ENST00000265354 SDCCAG3Q96C92 435 aa17.64■□□□□ 0.41
SRF-201ENST00000265354 FAM96AQ9H5X1 160 aa17.64■□□□□ 0.41
SRF-201ENST00000265354 TCF7L2Q9NQB0 619 aa17.64■□□□□ 0.41
SRF-201ENST00000265354 KCNK4Q9NYG8 393 aa17.64■□□□□ 0.41
SRF-201ENST00000265354 SAC3D1A6NKF1 404 aa17.63■□□□□ 0.41
SRF-201ENST00000265354 ZC3H11AO75152 810 aaKnown RBP eCLIP17.63■□□□□ 0.419e-11■■□□□ 11.9
SRF-201ENST00000265354 ABHD2P08910 425 aa17.63■□□□□ 0.41
SRF-201ENST00000265354 TGM2P21980 687 aa17.63■□□□□ 0.41
SRF-201ENST00000265354 SPRP35270 261 aaPredicted RBP17.63■□□□□ 0.41
SRF-201ENST00000265354 PDAP1Q13442 181 aaKnown RBP17.63■□□□□ 0.41
SRF-201ENST00000265354 ZACNQ401N2 412 aa17.63■□□□□ 0.41
SRF-201ENST00000265354 POTEAQ6S8J7 498 aa17.63■□□□□ 0.41
SRF-201ENST00000265354 BNC2Q6ZN30 1099 aaPredicted RBP17.63■□□□□ 0.41
SRF-201ENST00000265354 FAM151AQ8WW52 585 aa17.63■□□□□ 0.41
SRF-201ENST00000265354 SMAPO00193 183 aa17.63■□□□□ 0.41
SRF-201ENST00000265354 MAP4P27816 1152 aaKnown RBP17.63■□□□□ 0.41
SRF-201ENST00000265354 GOLGA7BQ2TAP0 167 aa17.63■□□□□ 0.41
SRF-201ENST00000265354 LIN52Q52LA3 116 aa17.63■□□□□ 0.41
SRF-201ENST00000265354 KCTD17Q8N5Z5 321 aa17.63■□□□□ 0.41
SRF-201ENST00000265354 WDR55Q9H6Y2 383 aaPredicted RBP17.63■□□□□ 0.41
SRF-201ENST00000265354 DDX28Q9NUL7 540 aaKnown RBP17.63■□□□□ 0.41
SRF-201ENST00000265354 ASTN2O75129 1339 aaPredicted RBP17.63■□□□□ 0.41
SRF-201ENST00000265354 CAP2P40123 477 aa17.63■□□□□ 0.41
SRF-201ENST00000265354 YWHAHQ04917 246 aaPredicted RBP17.63■□□□□ 0.41
SRF-201ENST00000265354 MSS51Q4VC12 460 aa17.63■□□□□ 0.41
SRF-201ENST00000265354 TLDC1Q6P9B6 456 aa17.63■□□□□ 0.41
SRF-201ENST00000265354 SPATA6LQ8N4H0 392 aa17.63■□□□□ 0.41
SRF-201ENST00000265354 SPATA33Q96N06 139 aa17.63■□□□□ 0.41
SRF-201ENST00000265354 CGRRF1Q99675 332 aa17.63■□□□□ 0.41
SRF-201ENST00000265354 TMEM79Q9BSE2 394 aa17.63■□□□□ 0.41
SRF-201ENST00000265354 FSD1LQ9BXM9 530 aa17.63■□□□□ 0.41
SRF-201ENST00000265354 CCDC68Q9H2F9 335 aa17.63■□□□□ 0.41
SRF-201ENST00000265354 ACAD9Q9H845 621 aa17.63■□□□□ 0.41
SRF-201ENST00000265354 RABGEF1Q9UJ41 708 aa17.63■□□□□ 0.41
SRF-201ENST00000265354 GLRA3O75311 464 aa17.62■□□□□ 0.41
SRF-201ENST00000265354 EPHA3P29320 983 aa17.62■□□□□ 0.41
SRF-201ENST00000265354 ETFBP38117 255 aa17.62■□□□□ 0.41
SRF-201ENST00000265354 ADARP55265 1226 aaKnown RBP17.62■□□□□ 0.41
SRF-201ENST00000265354 ACVR2BQ13705 512 aa17.62■□□□□ 0.41
SRF-201ENST00000265354 PCSK7Q16549 785 aa17.62■□□□□ 0.41
SRF-201ENST00000265354 CYP1B1Q16678 543 aa17.62■□□□□ 0.41
SRF-201ENST00000265354 TTC33Q6PID6 262 aaPredicted RBP17.62■□□□□ 0.41
SRF-201ENST00000265354 SATL1Q86VE3 508 aa17.62■□□□□ 0.41
SRF-201ENST00000265354 PAIP1Q9H074 479 aaKnown RBP17.62■□□□□ 0.41
SRF-201ENST00000265354 PPM1HQ9ULR3 514 aa17.62■□□□□ 0.41
SRF-201ENST00000265354 DFFAO00273 331 aa17.62■□□□□ 0.41
SRF-201ENST00000265354 GJB1P08034 283 aa17.62■□□□□ 0.41
SRF-201ENST00000265354 GALK1P51570 392 aa17.62■□□□□ 0.41
SRF-201ENST00000265354 PTPN11Q06124 597 aaPredicted RBP17.62■□□□□ 0.41
SRF-201ENST00000265354 BOLA3Q53S33 107 aa17.62■□□□□ 0.41
SRF-201ENST00000265354 KCNT2Q6UVM3 1135 aa17.62■□□□□ 0.41
SRF-201ENST00000265354 AMIGO3Q86WK7 504 aa17.62■□□□□ 0.41
SRF-201ENST00000265354 TJP2Q9UDY2 1190 aa17.62■□□□□ 0.41
SRF-201ENST00000265354 SPATA31A5Q5VU36 1347 aa17.62■□□□□ 0.41
SRF-201ENST00000265354 SPATA31A7Q8IWB4 1347 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms