RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 TADA2BQ86TJ2 420 aa14.93□□□□□ -0.02
SSBP1-201ENST00000265304 ZSWIM3Q96MP5 696 aa14.93□□□□□ -0.02
SSBP1-201ENST00000265304 ASB16Q96NS5 453 aa14.93□□□□□ -0.02
SSBP1-201ENST00000265304 SLC22A12Q96S37 553 aa14.93□□□□□ -0.02
SSBP1-201ENST00000265304 NPY6RQ99463 290 aa14.93□□□□□ -0.02
SSBP1-201ENST00000265304 SMOC2Q9H3U7 446 aa14.93□□□□□ -0.02
SSBP1-201ENST00000265304 DEF6Q9H4E7 631 aa14.93□□□□□ -0.02
SSBP1-201ENST00000265304 CCSER2Q9H7U1 834 aa14.93□□□□□ -0.02
SSBP1-201ENST00000265304 SPTLC3Q9NUV7 552 aa14.93□□□□□ -0.02
SSBP1-201ENST00000265304 REXO2Q9Y3B8 237 aaKnown RBP14.93□□□□□ -0.02
SSBP1-201ENST00000265304 MYOFQ9NZM1 2061 aa14.93□□□□□ -0.02
SSBP1-201ENST00000265304 TRAV19A0A0A6YYK7 116 aa14.92□□□□□ -0.02
SSBP1-201ENST00000265304 C19orf67A6NJJ6 358 aa14.92□□□□□ -0.02
SSBP1-201ENST00000265304 BTNL10A8MVZ5 291 aa14.92□□□□□ -0.02
SSBP1-201ENST00000265304 DPYSL4O14531 572 aa14.92□□□□□ -0.02
SSBP1-201ENST00000265304 IGLV3-27P01718 113 aa14.92□□□□□ -0.02
SSBP1-201ENST00000265304 KRT3P12035 628 aa14.92□□□□□ -0.02
SSBP1-201ENST00000265304 GJA1P17302 382 aa14.92□□□□□ -0.02
SSBP1-201ENST00000265304 FCARP24071 287 aa14.92□□□□□ -0.02
SSBP1-201ENST00000265304 RFC1P35251 1148 aaPredicted RBP14.92□□□□□ -0.02
SSBP1-201ENST00000265304 FLT3P36888 993 aa14.92□□□□□ -0.02
SSBP1-201ENST00000265304 PTPN9P43378 593 aa14.92□□□□□ -0.02
SSBP1-201ENST00000265304 CYP4F8P98187 520 aa14.92□□□□□ -0.02
SSBP1-201ENST00000265304 RING1Q06587 406 aa14.92□□□□□ -0.02
SSBP1-201ENST00000265304 MTF1Q14872 753 aa14.92□□□□□ -0.02
SSBP1-201ENST00000265304 STXBP5Q5T5C0 1151 aa14.92□□□□□ -0.02
SSBP1-201ENST00000265304 GPR158Q5T848 1215 aa14.92□□□□□ -0.02
SSBP1-201ENST00000265304 SYPL2Q5VXT5 272 aa14.92□□□□□ -0.02
SSBP1-201ENST00000265304 BTBD8Q5XKL5 378 aa14.92□□□□□ -0.02
SSBP1-201ENST00000265304 TRNP1Q6NT89 227 aa14.92□□□□□ -0.02
SSBP1-201ENST00000265304 PLCD3Q8N3E9 789 aa14.92□□□□□ -0.02
SSBP1-201ENST00000265304 ADAMTS19Q8TE59 1207 aa14.92□□□□□ -0.02
SSBP1-201ENST00000265304 SMARCD2Q92925 531 aa14.92□□□□□ -0.02
SSBP1-201ENST00000265304 NXPE3Q969Y0 559 aa14.92□□□□□ -0.02
SSBP1-201ENST00000265304 E2F7Q96AV8 911 aa14.92□□□□□ -0.02
SSBP1-201ENST00000265304 KLF16Q9BXK1 252 aaPredicted RBP14.92□□□□□ -0.02
SSBP1-201ENST00000265304 KIF9Q9HAQ2 790 aa14.92□□□□□ -0.02
SSBP1-201ENST00000265304 MRPL47Q9HD33 250 aaKnown RBP14.92□□□□□ -0.02
SSBP1-201ENST00000265304 CNOT8Q9UFF9 292 aaKnown RBP14.92□□□□□ -0.02
SSBP1-201ENST00000265304 DNMT3LQ9UJW3 386 aa14.92□□□□□ -0.02
SSBP1-201ENST00000265304 HBS1LQ9Y450 684 aaKnown RBP14.92□□□□□ -0.02
SSBP1-201ENST00000265304 SCINQ9Y6U3 715 aa14.92□□□□□ -0.02
SSBP1-201ENST00000265304 DOCK4Q8N1I0 1966 aa14.91□□□□□ -0.02
SSBP1-201ENST00000265304 A0A0A6YYK5 440 aaPredicted RBP14.91□□□□□ -0.02
SSBP1-201ENST00000265304 TMCO5BA8MYB1 307 aa14.91□□□□□ -0.02
SSBP1-201ENST00000265304 GREM1O60565 184 aa14.91□□□□□ -0.02
SSBP1-201ENST00000265304 TBX18O95935 607 aa14.91□□□□□ -0.02
SSBP1-201ENST00000265304 MAGEA1P43355 309 aa14.91□□□□□ -0.02
SSBP1-201ENST00000265304 KPNA1P52294 538 aaPredicted RBP14.91□□□□□ -0.02
SSBP1-201ENST00000265304 ZXDBP98169 803 aa14.91□□□□□ -0.02
SSBP1-201ENST00000265304 IFRD2Q12894 506 aaPredicted RBP14.91□□□□□ -0.02
SSBP1-201ENST00000265304 SLC25A52Q3SY17 297 aa14.91□□□□□ -0.02
SSBP1-201ENST00000265304 FAM78AQ5JUQ0 283 aa14.91□□□□□ -0.02
SSBP1-201ENST00000265304 FAM102AQ5T9C2 384 aaPredicted RBP14.91□□□□□ -0.02
SSBP1-201ENST00000265304 OTUD1Q5VV17 481 aaPredicted RBP14.91□□□□□ -0.02
SSBP1-201ENST00000265304 ARID3BQ8IVW6 561 aaPredicted RBP14.91□□□□□ -0.02
SSBP1-201ENST00000265304 DEFB106AQ8N104 65 aa14.91□□□□□ -0.02
SSBP1-201ENST00000265304 MAB21L3Q8N8X9 362 aa14.91□□□□□ -0.02
SSBP1-201ENST00000265304 GOLGA1Q92805 767 aa14.91□□□□□ -0.02
SSBP1-201ENST00000265304 USP13Q92995 863 aaPredicted RBP14.91□□□□□ -0.02
SSBP1-201ENST00000265304 AZIN2Q96A70 460 aa14.91□□□□□ -0.02
SSBP1-201ENST00000265304 ACSF2Q96CM8 615 aaPredicted RBP14.91□□□□□ -0.02
SSBP1-201ENST00000265304 SLC39A13Q96H72 371 aa14.91□□□□□ -0.02
SSBP1-201ENST00000265304 CYP2S1Q96SQ9 504 aa14.91□□□□□ -0.02
SSBP1-201ENST00000265304 PACSIN1Q9BY11 444 aa14.91□□□□□ -0.02
SSBP1-201ENST00000265304 THAP2Q9H0W7 228 aa14.91□□□□□ -0.02
SSBP1-201ENST00000265304 LUC7LQ9NQ29 371 aaKnown RBP14.91□□□□□ -0.02
SSBP1-201ENST00000265304 TDP1Q9NUW8 608 aa14.91□□□□□ -0.02
SSBP1-201ENST00000265304 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.91□□□□□ -0.02
SSBP1-201ENST00000265304 UVRAGQ9P2Y5 699 aa14.91□□□□□ -0.02
SSBP1-201ENST00000265304 NAALADL1Q9UQQ1 740 aa14.91□□□□□ -0.02
SSBP1-201ENST00000265304 NR2E1Q9Y466 385 aa14.91□□□□□ -0.02
SSBP1-201ENST00000265304 PCDHA13Q9Y5I0 950 aa14.91□□□□□ -0.02
SSBP1-201ENST00000265304 ECI2O75521 394 aa14.9□□□□□ -0.02
SSBP1-201ENST00000265304 ZNF143P52747 638 aaPredicted RBP14.9□□□□□ -0.02
SSBP1-201ENST00000265304 RPL7AP62424 266 aaKnown RBP14.9□□□□□ -0.02
SSBP1-201ENST00000265304 KRT83P78385 493 aa14.9□□□□□ -0.02
SSBP1-201ENST00000265304 COG7P83436 770 aa14.9□□□□□ -0.02
SSBP1-201ENST00000265304 ACAP1Q15027 740 aa14.9□□□□□ -0.02
SSBP1-201ENST00000265304 SPA17Q15506 151 aa14.9□□□□□ -0.02
SSBP1-201ENST00000265304 TRIP4Q15650 581 aaPredicted RBP14.9□□□□□ -0.02
SSBP1-201ENST00000265304 DNAJC24Q6P3W2 148 aa14.9□□□□□ -0.02
SSBP1-201ENST00000265304 HTR3DQ70Z44 454 aa14.9□□□□□ -0.02
SSBP1-201ENST00000265304 DNAAF5Q86Y56 855 aa14.9□□□□□ -0.02
SSBP1-201ENST00000265304 ADHFE1Q8IWW8 467 aa14.9□□□□□ -0.02
SSBP1-201ENST00000265304 CELF5Q8N6W0 485 aaKnown RBP14.9□□□□□ -0.02
SSBP1-201ENST00000265304 NIPA2Q8N8Q9 360 aa14.9□□□□□ -0.02
SSBP1-201ENST00000265304 ARL14EPQ8N8R7 260 aaPredicted RBP14.9□□□□□ -0.02
SSBP1-201ENST00000265304 JOSD2Q8TAC2 188 aa14.9□□□□□ -0.02
SSBP1-201ENST00000265304 ZSCAN18Q8TBC5 510 aaPredicted RBP14.9□□□□□ -0.02
SSBP1-201ENST00000265304 DQX1Q8TE96 717 aaKnown RBP14.9□□□□□ -0.02
SSBP1-201ENST00000265304 RNF139Q8WU17 664 aa14.9□□□□□ -0.02
SSBP1-201ENST00000265304 CTNNBL1Q8WYA6 563 aaPredicted RBP14.9□□□□□ -0.02
SSBP1-201ENST00000265304 EDEM1Q92611 657 aa14.9□□□□□ -0.02
SSBP1-201ENST00000265304 ELSPBP1Q96BH3 223 aa14.9□□□□□ -0.02
SSBP1-201ENST00000265304 FAM149B1Q96BN6 582 aa14.9□□□□□ -0.02
SSBP1-201ENST00000265304 ZNF653Q96CK0 615 aa14.9□□□□□ -0.02
SSBP1-201ENST00000265304 ARHGEF26Q96DR7 871 aa14.9□□□□□ -0.02
SSBP1-201ENST00000265304 CALR3Q96L12 384 aaKnown RBP14.9□□□□□ -0.02
SSBP1-201ENST00000265304 ASB2Q96Q27 587 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms