RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 PLEKHA8Q96JA3 519 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 PCMTD2Q9NV79 361 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 NARFQ9UHQ1 456 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 HUS1O60921 280 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 ASS1P00966 412 aaKnown RBP5.87□□□□□ -1.47
VCAN-201ENST00000265077 NPTX2P47972 431 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 TPTEP56180 551 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 C6orf10Q5SRN2 563 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 SUSD4Q5VX71 490 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 RNF135Q8IUD6 432 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 TMA16Q96EY4 203 aaKnown RBP5.87□□□□□ -1.47
VCAN-201ENST00000265077 C9orf72Q96LT7 481 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 ILKAPQ9H0C8 392 aaPredicted RBP5.87□□□□□ -1.47
VCAN-201ENST00000265077 F5H6K3 240 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 AKAP10O43572 662 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 OSTNP61366 133 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 KLRC3Q07444 240 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 CHI3L2Q15782 390 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 CNGA2Q16280 664 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 C17orf80Q9BSJ5 609 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 PIDD1Q9HB75 910 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 RAD23AP54725 363 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 TLDC1Q6P9B6 456 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 PDPRQ8NCN5 879 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 ASZ1Q8WWH4 475 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 MKL1Q969V6 931 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 EHD1Q9H4M9 534 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 GNPTGQ9UJJ9 305 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 LRRC42Q9Y546 428 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 SPEF2Q9C093 1822 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 GABBR2O75899 941 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 ZNF806P0C7X5 589 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 THRAP10827 490 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 ATG9AQ7Z3C6 839 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 PM20D2Q8IYS1 436 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 PLEKHA5Q9HAU0 1116 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 VTA1Q9NP79 307 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 TRMT6Q9UJA5 497 aaKnown RBP5.87□□□□□ -1.47
VCAN-201ENST00000265077 PLCL2Q9UPR0 1127 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 NEURL4Q96JN8 1562 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 GRIN2DO15399 1336 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 TM9SF1O15321 606 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 GZMAP12544 262 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 MAGEA10P43363 369 aaPredicted RBP5.87□□□□□ -1.47
VCAN-201ENST00000265077 SLC5A3P53794 718 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 CENPPQ6IPU0 288 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 XRRA1Q6P2D8 792 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 ANKMY2Q8IV38 441 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 UCMAQ8WVF2 138 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 MCEEQ96PE7 176 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 C6orf62Q9GZU0 229 aaPredicted RBP5.87□□□□□ -1.47
VCAN-201ENST00000265077 ZNF408Q9H9D4 720 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 FNDC3AQ9Y2H6 1198 aaKnown RBP5.87□□□□□ -1.47
VCAN-201ENST00000265077 ATG2BQ96BY7 2078 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 FAM196BA6NMK8 535 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 GRM1Q13255 1194 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 SLC13A5Q86YT5 568 aaPredicted RBP5.87□□□□□ -1.47
VCAN-201ENST00000265077 SDR16C5Q8N3Y7 309 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 HDAC2Q92769 488 aaKnown RBP5.87□□□□□ -1.47
VCAN-201ENST00000265077 ACAD9Q9H845 621 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 DEPDC5O75140 1603 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 PNMA8CA0A1B0GUJ8 204 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 SAGE2PA6NJ88 616 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 PDE9AO76083 593 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 YWHABP31946 246 aaKnown RBP5.87□□□□□ -1.47
VCAN-201ENST00000265077 SULT2A1Q06520 285 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 ZNF543Q08ER8 600 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 C5orf22Q49AR2 442 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 METTL21CQ5VZV1 264 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 RNF219Q5W0B1 726 aaPredicted RBP5.87□□□□□ -1.47
VCAN-201ENST00000265077 PLEKHM3Q6ZWE6 761 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 PACSIN1Q9BY11 444 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 ZNF556Q9HAH1 456 aa5.87□□□□□ -1.47
VCAN-201ENST00000265077 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.87□□□□□ -1.47
VCAN-201ENST00000265077 CCDC182A6NF36 153 aa5.86□□□□□ -1.47
VCAN-201ENST00000265077 CTDNEP1O95476 244 aa5.86□□□□□ -1.47
VCAN-201ENST00000265077 SOX6P35712 828 aa5.86□□□□□ -1.47
VCAN-201ENST00000265077 ACADSBP45954 432 aa5.86□□□□□ -1.47
VCAN-201ENST00000265077 FOXO4P98177 505 aa5.86□□□□□ -1.47
VCAN-201ENST00000265077 CTC1Q2NKJ3 1217 aa5.86□□□□□ -1.47
VCAN-201ENST00000265077 TFDP3Q5H9I0 405 aa5.86□□□□□ -1.47
VCAN-201ENST00000265077 TAGAPQ8N103 731 aa5.86□□□□□ -1.47
VCAN-201ENST00000265077 CCDC126Q96EE4 140 aa5.86□□□□□ -1.47
VCAN-201ENST00000265077 KIF12Q96FN5 646 aa5.86□□□□□ -1.47
VCAN-201ENST00000265077 KRT84Q9NSB2 600 aa5.86□□□□□ -1.47
VCAN-201ENST00000265077 C20orf96Q9NUD7 363 aaPredicted RBP5.86□□□□□ -1.47
VCAN-201ENST00000265077 TMEM260Q9NX78 707 aa5.86□□□□□ -1.47
VCAN-201ENST00000265077 COL15A1P39059 1388 aa5.86□□□□□ -1.47
VCAN-201ENST00000265077 ZNF335Q9H4Z2 1342 aaPredicted RBP5.86□□□□□ -1.47
VCAN-201ENST00000265077 BMP10O95393 424 aa5.86□□□□□ -1.47
VCAN-201ENST00000265077 WEE2P0C1S8 567 aa5.86□□□□□ -1.47
VCAN-201ENST00000265077 RALAP11233 206 aa5.86□□□□□ -1.47
VCAN-201ENST00000265077 IL4RP24394 825 aa5.86□□□□□ -1.47
VCAN-201ENST00000265077 FOLH1Q04609 750 aa5.86□□□□□ -1.47
VCAN-201ENST00000265077 ILF2Q12905 390 aaKnown RBP5.86□□□□□ -1.47
VCAN-201ENST00000265077 EAPPQ56P03 285 aaPredicted RBP5.86□□□□□ -1.47
VCAN-201ENST00000265077 FAM196AQ6ZSG2 479 aa5.86□□□□□ -1.47
VCAN-201ENST00000265077 RTKN2Q8IZC4 609 aa5.86□□□□□ -1.47
VCAN-201ENST00000265077 RAB42Q8N4Z0 105 aa5.86□□□□□ -1.47
VCAN-201ENST00000265077 ATPAF2Q8N5M1 289 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms